Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 8.3e-199 696.8 346 100.0
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 8.3e-191 670.2 346 97.1
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 5.4e-158 561.2 341 81.8
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 2.7e-157 558.9 341 82.4
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 4.0e-153 545.0 347 79.8
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 8.4e-151 537.3 339 79.9
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 2.5e-134 482.6 342 71.9
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 1.8e-132 476.5 342 69.3
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 1.9e-131 473.0 350 68.3
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 7.4e-131 471.1 340 70.9
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 3.4e-128 462.2 343 66.5
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 5.9e-128 461.5 342 70.2
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 6.5e-127 458.0 342 69.3
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.1e-126 457.2 344 69.5
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 7.2e-126 454.5 342 65.8
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 2.1e-125 453.0 349 65.0
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 3.6e-125 452.2 340 66.5
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 5.1e-124 448.4 342 65.5
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 4.4e-123 445.3 346 63.0
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 1.7e-122 443.4 377 60.7
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 3.7e-122 442.2 343 64.4
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 4.1e-121 438.7 344 66.3
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 5.3e-121 438.3 344 66.3
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 1.2e-120 437.2 343 65.0
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 7.7e-120 434.5 346 64.2
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 1.0e-119 434.1 342 64.3
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 1.0e-119 434.1 338 66.0
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 2.9e-119 432.6 346 63.9
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 6.5e-119 431.4 344 65.1
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 1.1e-118 430.6 345 63.8
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 2.5e-118 429.5 350 64.9
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.2e-118 429.1 346 63.0
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 4.2e-118 428.7 346 64.5
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 7.2e-118 427.9 338 63.3
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.6e-117 426.8 342 63.2
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 2.1e-117 426.4 348 62.1
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 2.7e-117 426.0 349 62.5
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 6.1e-117 424.9 346 61.0
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 1.4e-116 423.7 357 62.2
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 1.4e-116 423.7 352 61.6
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 1.4e-116 423.7 343 64.1
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 3.0e-116 422.5 345 63.2
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.9e-116 422.2 356 61.5
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 2.6e-115 419.5 346 64.7
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 4.4e-115 418.7 344 63.4
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 5.7e-115 418.3 340 62.4
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 7.4e-115 417.9 351 60.7
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 9.7e-115 417.5 344 63.4
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 1.1e-113 414.1 346 62.7
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 3.1e-113 412.5 344 63.4
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 9.1e-113 411.0 343 59.8
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 2.9e-111 406.0 349 61.6
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 6.5e-111 404.8 345 62.9
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 1.1e-110 404.1 345 63.2
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 5.5e-110 401.7 342 60.8
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 7.2e-110 401.4 347 63.1
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 1.6e-109 400.2 342 59.9
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 2.1e-109 399.8 340 60.6
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 6.1e-109 398.3 348 60.9
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 1.2e-107 394.0 345 61.4
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 1.5e-107 393.7 342 59.9
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 4.4e-107 392.1 346 59.8
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 1.1e-105 387.5 342 61.4
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 5.3e-105 385.2 336 60.1
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 7.0e-105 384.8 342 59.6
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 7.0e-105 384.8 343 60.1
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 9.1e-105 384.4 274 69.7
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.2e-104 384.0 276 72.8
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 1.6e-104 383.6 427 51.1
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 2.0e-104 383.3 346 57.5
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 8.5e-103 377.9 341 59.8
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 1.9e-102 376.7 285 67.4
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 1.9e-102 376.7 348 57.5
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 9.4e-102 374.4 346 57.8
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 2.1e-101 373.2 351 55.0
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 2.1e-101 373.2 342 58.5
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 4.7e-101 372.1 343 56.6
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 1.0e-100 370.9 342 58.2
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 7.5e-99 364.8 336 57.1
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 1.3e-98 364.0 328 56.4
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 2.4e-97 359.8 346 56.1
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 3.1e-97 359.4 348 54.9
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 7.0e-97 358.2 345 58.3
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 2.3e-95 353.2 340 55.0
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 1.9e-94 350.1 347 55.6
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 4.0e-92 342.4 333 54.1
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 9.8e-91 337.8 274 61.7
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 1.4e-84 317.4 211 73.5
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 3.0e-79 299.7 351 48.4
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 6.6e-79 298.5 212 69.3
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 5.8e-67 258.8 329 42.9
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 7.3e-62 241.9 236 57.6
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 4.0e-60 236.1 299 48.5
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 7.1e-57 225.3 177 59.9
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.2e-51 208.0 178 59.0
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 3.6e-45 186.4 187 54.0
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 4.6e-40 169.5 274 37.6
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 5.1e-39 166.0 309 34.3
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 3.7e-37 159.8 267 36.3
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 1.3e-34 151.4 201 44.8
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 1.7e-34 151.0 170 48.2
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 8.4e-34 148.7 128 58.6
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 3.3e-30 136.7 181 39.8
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 9.6e-30 135.2 131 56.5
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 3.7e-29 133.3 126 58.7
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 2.1e-24 117.5 111 57.7
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 7.9e-24 115.5 114 54.4
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 1.3e-21 108.2 148 44.6
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.4e-15 88.2 73 52.1
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 8.8e-15 85.5 104 45.2
EL10Ac1g02376 Beta vulgaris HOM05D006958 ORTHO05D008814 8.2e-13 79.0 66 60.6
Nn5g30604 Nelumbo nucifera HOM05D006958 ORTHO05D008814 9.1e-12 75.5 74 52.7
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 2.6e-11 73.9 82 52.4
HPP92_009560 Vanilla planifolia HOM05D001084 ORTHO05D001275 7.7e-11 72.4 62 59.7
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 1.4e-09 68.2 67 50.7
AUR62017930 Chenopodium quinoa HOM05D061994 ORTHO05D138367 5.1e-07 59.7 256 26.6
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 2.0e-06 57.8 37 64.9


User provided reference genes

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