Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 2.3e-243 845.1 427 100.0
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 2.0e-242 842.0 427 99.5
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 3.9e-190 668.3 447 80.1
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 3.3e-189 665.2 425 82.4
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 5.3e-179 631.3 403 79.2
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 1.0e-177 627.1 381 82.2
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 1.4e-176 623.2 402 78.4
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 1.9e-176 622.9 420 75.7
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 1.8e-174 616.3 403 78.2
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 3.7e-172 608.6 416 74.8
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 1.4e-171 606.7 405 75.8
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 3.1e-171 605.5 383 78.3
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 5.3e-171 604.7 426 73.5
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 3.2e-168 595.5 403 75.9
Atru.chr12.1880 Acer truncatum HOM05D007064 ORTHO05D008772 1.6e-167 593.2 424 73.1
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 6.1e-167 591.3 427 71.0
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 1.4e-166 590.1 406 74.1
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 1.8e-166 589.7 426 70.9
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 2.3e-166 589.3 442 69.0
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 5.1e-166 588.2 372 77.4
COL.COLO4_15235 Corchorus olitorius HOM05D007064 ORTHO05D008772 8.8e-166 587.4 381 77.2
PSO063G1297 Papaver somniferum HOM05D007064 ORTHO05D008772 1.5e-165 586.6 426 71.6
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 3.3e-165 585.5 377 77.5
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 3.3e-165 585.5 426 71.4
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 9.7e-165 583.9 366 79.5
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 1.3e-164 583.6 394 74.9
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 1.3e-164 583.6 426 71.1
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 1.7e-164 583.2 425 71.1
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 1.7e-164 583.2 410 72.0
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 1.4e-163 580.1 371 76.8
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 5.3e-163 578.2 384 75.8
PSO782G0881 Papaver somniferum HOM05D007064 ORTHO05D008772 9.1e-163 577.4 406 72.9
RcHm_v2.0_Chr4g0388921 Rosa chinensis HOM05D007064 ORTHO05D008772 9.1e-163 577.4 384 75.3
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 2.0e-162 576.2 384 75.5
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 2.6e-162 575.9 370 77.0
CsaV3_3G050060 Cucumis sativus L. HOM05D007064 ORTHO05D008772 5.9e-162 574.7 384 72.9
Aqoxy3G02225 Aquilegia oxysepala HOM05D007064 ORTHO05D008772 8.5e-161 570.9 428 69.9
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 1.4e-160 570.1 374 75.9
Cc02_g00210 Coffea canephora HOM05D007064 ORTHO05D008772 3.2e-160 568.9 385 74.5
HanXRQChr14g0451581 Helianthus annuus HOM05D007064 ORTHO05D008772 3.2e-160 568.9 404 71.3
Sabra19G0062000 Salix brachista HOM05D007064 ORTHO05D008772 3.6e-159 565.5 381 76.4
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 1.8e-158 563.1 371 73.9
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 3.9e-158 562.0 385 74.5
Sp6g27320 Schrenkiella parvula HOM05D007064 ORTHO05D008772 2.0e-157 559.7 384 72.9
Dinv17250 Davidia involucrata HOM05D007064 ORTHO05D008772 2.6e-157 559.3 373 80.4
THA.LOC104820893 Tarenaya hassleriana HOM05D007064 ORTHO05D008772 4.4e-157 558.5 399 71.9
Thhalv10013656m.g Eutrema salsugineum HOM05D007064 ORTHO05D008772 7.4e-157 557.8 384 72.9
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 1.3e-156 557.0 372 72.6
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 1.3e-156 557.0 371 73.0
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 4.8e-156 555.1 382 74.9
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 6.3e-156 554.7 412 69.9
arahy.Tifrunner.gnm1.ann1.P291P9 Arachis hypogaea HOM05D007064 ORTHO05D008772 1.1e-155 553.9 377 72.9
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 2.4e-155 552.7 374 71.7
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 2.4e-155 552.7 371 72.2
AL6G27830 Arabidopsis lyrata HOM05D007064 ORTHO05D008772 4.1e-155 552.0 384 72.4
AT5G16810 Arabidopsis thaliana HOM05D007064 ORTHO05D008772 9.1e-155 550.8 384 71.9
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 2.0e-154 549.7 418 69.1
AUR62028195 Chenopodium quinoa HOM05D007064 ORTHO05D008772 7.7e-154 547.7 372 71.8
arahy.Tifrunner.gnm1.ann1.EDBW82 Arachis hypogaea HOM05D007064 ORTHO05D008772 1.0e-153 547.4 422 66.8
BolC2t06775H Brassica oleracea HOM05D007064 ORTHO05D008772 1.7e-153 546.6 370 73.2
BcaC03g18516 Brassica carinata HOM05D007064 ORTHO05D008772 3.8e-153 545.4 370 73.0
C02p08600 Brassica napus HOM05D007064 ORTHO05D008772 3.8e-153 545.4 370 73.0
Lj1A1033T73 Lonicera japonica HOM05D007064 ORTHO05D008772 9.4e-152 540.8 374 75.7
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 2.1e-151 539.7 387 69.8
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 6.1e-151 538.1 344 76.5
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 4.4e-149 531.9 405 67.2
ATR0829G191 Amborella trichopoda HOM05D007064 ORTHO05D008772 9.7e-149 530.8 384 68.5
BcaNung04953 Brassica carinata HOM05D007064 ORTHO05D008772 9.7e-149 530.8 384 69.8
ClCG09G013090 Citrullus lanatus HOM05D007064 ORTHO05D008772 3.7e-148 528.9 367 71.4
Medtr5g006230 Medicago truncatula HOM05D007064 ORTHO05D008772 4.8e-148 528.5 388 70.4
vmacro06523 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 2.4e-147 526.2 457 64.8
TPR.G37970 Trifolium pratense HOM05D007064 ORTHO05D008772 7.0e-147 524.6 369 72.1
BraA02t05344Z Brassica rapa HOM05D007064 ORTHO05D008772 2.6e-146 522.7 376 70.2
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 5.9e-146 521.5 371 70.9
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 8.5e-145 517.7 372 70.2
Os02g0694800 Oryza sativa ssp. japonica HOM05D007064 ORTHO05D008772 8.5e-145 517.7 404 65.1
A02p03790 Brassica napus HOM05D007064 ORTHO05D008772 1.9e-144 516.5 378 68.8
Zm00001eb187800 Zea mays HOM05D007064 ORTHO05D008772 1.9e-144 516.5 394 65.2
Aa31LG11G12770 Aethionema arabicum HOM05D007064 ORTHO05D008772 1.0e-142 510.8 409 65.0
Prupe.1G025200 Prunus persica HOM05D007064 ORTHO05D008772 8.2e-140 501.1 322 78.6
HPP92_025673 Vanilla planifolia HOM05D007064 ORTHO05D008772 1.7e-137 493.4 380 66.3
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 3.2e-136 489.2 419 63.0
MELO3C003312.2 Cucumis melo HOM05D007064 ORTHO05D008772 2.7e-135 486.1 332 72.3
CDE11G0292 Ceratophyllum demersum HOM05D007064 ORTHO05D008772 9.8e-133 477.6 372 65.1
Hma1.2p1_0649F.1_g195260 Hydrangea macrophylla HOM05D007064 ORTHO05D008772 2.8e-132 476.1 282 85.5
SEGI_11081 Sequoiadendron giganteum HOM05D007064 ORTHO05D008772 2.0e-130 469.9 393 62.1
Manes.09G127400 Manihot esculenta HOM05D007064 ORTHO05D008772 8.0e-127 458.0 371 66.6
Potri.019G050500 Populus trichocarpa HOM05D007064 ORTHO05D008772 3.4e-125 452.6 310 76.1
Sed0013285 Sechium edule HOM05D007064 ORTHO05D008772 1.3e-124 450.7 288 74.7
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 2.9e-121 439.5 282 75.9
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 5.0e-121 438.7 270 80.4
Psat2g189080 Pisum sativum HOM05D007064 ORTHO05D008772 7.5e-117 424.9 315 70.5
Carub.0006s1503 Capsella rubella HOM05D007064 ORTHO05D008772 9.5e-112 407.9 277 74.4
Glyma.01G233100 Glycine max HOM05D007064 ORTHO05D008772 2.1e-106 390.2 322 62.7
Pp3c23_10770 Physcomitrium patens HOM05D007064 ORTHO05D008772 2.7e-106 389.8 421 49.4
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 3.5e-106 389.4 391 57.8
CARHR196350 Cardamine hirsuta HOM05D007064 ORTHO05D008772 1.5e-104 384.0 293 65.5
Mapoly0096s0061 Marchantia polymorpha HOM05D007064 ORTHO05D008772 5.2e-102 375.6 400 49.8
AagrBONN_evm.TU.Sc2ySwM_344.2887 Anthoceros agrestis HOM05D007064 ORTHO05D008772 6.0e-74 282.3 324 49.4
SMO343G0012 Selaginella moellendorffii HOM05D007064 ORTHO05D008772 1.4e-59 234.6 400 38.5
Cpa.g.sc43.97 Carica papaya HOM05D007064 ORTHO05D008772 2.1e-50 204.1 192 59.9
CBR_g8898 Chara braunii HOM05D007064 ORTHO05D008772 2.9e-44 183.7 126 68.3
Psat0s4094g0040 Pisum sativum HOM05D007064 ORTHO05D008772 1.6e-42 177.9 107 78.5
CBR_g8900 Chara braunii HOM05D007064 ORTHO05D000002 6.5e-36 156.0 210 44.8
Cpa.g.sc43.98 Carica papaya HOM05D007064 ORTHO05D008772 2.0e-32 144.4 72 95.8
Oeu043948.1 Olea europaea HOM05D007064 ORTHO05D008772 5.3e-30 136.3 82 82.9
Lj1A1033G66 Lonicera japonica HOM05D007064 ORTHO05D008772 1.6e-21 108.2 55 90.9
TPR.G40530 Trifolium pratense HOM05D007064 ORTHO05D008772 1.5e-19 101.7 55 83.6
HanXRQChr01g0005821 Helianthus annuus HOM05D007064 ORTHO05D008772 4.7e-18 96.7 70 65.7
PRCOL_00004348 Prasinoderma coloniale HOM05D007064 ORTHO05D008772 2.8e-10 70.9 226 29.2
CBR_g6359 Chara braunii HOM05D007064 ORTHO05D008772 1.8e-09 68.2 96 40.6
Pp3c10_6850 Physcomitrium patens HOM05D002406 ORTHO05D006947 1.8e-09 68.2 370 25.7
Mapoly0001s0031 Marchantia polymorpha HOM05D002406 ORTHO05D006947 3.0e-09 67.4 364 26.9
vmacro06524 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 3.7e-07 60.5 33 84.8
CDE09G1163 Ceratophyllum demersum HOM05D002406 ORTHO05D007964 4.9e-07 60.1 282 25.2
TAR629G2259 Trochodendron aralioides HOM05D002406 ORTHO05D007964 8.3e-07 59.3 282 26.6
MBI13_g34060_MAGBIO Magnolia biondii HOM05D002406 ORTHO05D007964 1.8e-06 58.2 286 25.9
CsaV3_5G025330 Cucumis sativus L. HOM05D002406 ORTHO05D007964 4.1e-06 57.0 283 25.8
SGA_v2.0_scaffold14G06823 Striga asiatica HOM05D002406 ORTHO05D007964 4.1e-06 57.0 279 24.7
CiPaw.15G003700 Carya illinoinensis HOM05D002406 ORTHO05D007964 5.4e-06 56.6 278 25.5
Sed0011685 Sechium edule HOM05D002406 ORTHO05D007964 7.0e-06 56.2 341 24.3
SMO364G0095 Selaginella moellendorffii HOM05D002406 ORTHO05D007964 7.0e-06 56.2 263 24.3
Cc11_g10600 Coffea canephora HOM05D002406 ORTHO05D007964 9.2e-06 55.8 287 25.1
Glyma.02G100000 Glycine max HOM05D002406 ORTHO05D007964 9.2e-06 55.8 286 24.1
MCO05G602 Micromonas commoda HOM05D007064 ORTHO05D008772 9.2e-06 55.8 192 24.5


User provided reference genes

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