Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 2.0e-68 262.3 131 100.0
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 2.7e-57 225.3 128 85.9
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 1.1e-55 219.9 133 82.7
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 1.9e-55 219.2 130 80.8
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 4.7e-54 214.5 130 78.5
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 8.1e-54 213.8 130 78.5
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 8.1e-54 213.8 130 78.5
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 1.8e-53 212.6 130 79.2
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 2.3e-53 212.2 128 78.1
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.3e-53 212.2 130 77.7
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 2.3e-53 212.2 133 78.2
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 2.3e-53 212.2 128 79.7
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 5.2e-53 211.1 131 78.6
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 6.8e-53 210.7 130 76.9
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 8.9e-53 210.3 133 79.7
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 8.9e-53 210.3 133 78.9
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 1.2e-52 209.9 130 76.9
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 2.6e-52 208.8 128 77.3
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 2.6e-52 208.8 128 76.6
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 2.6e-52 208.8 133 77.4
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 3.4e-52 208.4 133 75.9
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 3.4e-52 208.4 133 75.9
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 3.4e-52 208.4 133 75.9
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 3.4e-52 208.4 130 78.5
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 7.6e-52 207.2 133 76.7
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 7.6e-52 207.2 133 75.2
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 7.6e-52 207.2 130 76.9
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 1.7e-51 206.1 133 76.7
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 1.7e-51 206.1 130 76.2
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 2.2e-51 205.7 130 76.9
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 2.9e-51 205.3 130 76.9
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 3.7e-51 204.9 130 76.9
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 4.9e-51 204.5 136 75.0
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 8.4e-51 203.8 122 78.7
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-50 203.4 133 74.4
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-50 203.4 133 74.4
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 1.4e-50 203.0 130 75.4
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 1.9e-50 202.6 126 75.4
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 1.9e-50 202.6 130 75.4
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 1.9e-50 202.6 133 75.2
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 5.4e-50 201.1 130 73.8
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 7.1e-50 200.7 130 75.4
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 9.2e-50 200.3 130 76.2
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 9.2e-50 200.3 133 73.7
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 9.2e-50 200.3 130 73.1
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 1.2e-49 199.9 133 72.9
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 1.6e-49 199.5 133 75.2
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 2.1e-49 199.1 132 75.0
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 2.7e-49 198.7 124 75.8
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 3.5e-49 198.4 130 73.8
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 7.8e-49 197.2 130 73.1
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 7.8e-49 197.2 130 73.1
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 7.8e-49 197.2 130 73.1
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 7.8e-49 197.2 130 73.1
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 7.8e-49 197.2 126 73.8
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 1.0e-48 196.8 130 73.1
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 1.0e-48 196.8 126 73.8
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 1.0e-48 196.8 126 75.4
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 1.3e-48 196.4 131 73.3
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 1.3e-48 196.4 128 74.2
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 1.3e-48 196.4 130 73.1
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 1.7e-48 196.1 130 73.1
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 2.3e-48 195.7 128 71.1
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 2.3e-48 195.7 130 74.6
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 3.0e-48 195.3 130 72.3
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 3.0e-48 195.3 130 72.3
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 8.6e-48 193.7 125 73.6
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 8.6e-48 193.7 127 71.7
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.1e-47 193.4 125 72.8
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.1e-47 193.4 125 72.8
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 1.1e-47 193.4 130 71.5
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 1.5e-47 193.0 128 71.1
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 1.5e-47 193.0 128 71.1
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 3.3e-47 191.8 129 71.3
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 4.3e-47 191.4 129 71.3
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 4.3e-47 191.4 130 69.2
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 7.3e-47 190.7 139 69.1
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 7.3e-47 190.7 126 70.6
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 2.1e-46 189.1 125 72.0
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 2.1e-46 189.1 140 67.9
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 2.8e-46 188.7 124 72.6
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 3.6e-46 188.3 139 66.9
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 4.7e-46 188.0 143 66.4
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 4.7e-46 188.0 129 70.5
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 8.1e-46 187.2 125 72.8
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 8.1e-46 187.2 131 71.0
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 8.1e-46 187.2 130 67.7
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 1.1e-45 186.8 128 68.8
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 1.1e-45 186.8 139 66.2
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 1.1e-45 186.8 130 70.8
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 1.4e-45 186.4 130 70.8
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 1.4e-45 186.4 126 69.0
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 1.8e-45 186.0 137 66.4
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 1.8e-45 186.0 137 66.4
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 2.4e-45 185.7 130 70.0
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 2.4e-45 185.7 124 70.2
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 5.2e-45 184.5 129 69.0
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 8.9e-45 183.7 123 69.9
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 8.9e-45 183.7 130 66.9
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 2.0e-44 182.6 126 72.2
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 2.6e-44 182.2 130 66.9
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.3e-43 179.9 153 59.5
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 1.7e-43 179.5 130 66.9
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 2.2e-43 179.1 130 66.9
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 2.2e-43 179.1 130 69.2
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 1.1e-42 176.8 129 69.0
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 1.9e-42 176.0 129 66.7
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 2.7e-41 172.2 165 55.8
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 7.8e-41 170.6 130 65.4
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 3.0e-40 168.7 126 66.7
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 3.0e-40 168.7 128 65.6
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 9.6e-39 163.7 126 69.0
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 7.6e-36 154.1 97 74.2
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 1.3e-35 153.3 127 60.6
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 3.8e-35 151.8 130 56.2
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 2.7e-33 145.6 130 56.2
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 4.6e-33 144.8 95 73.7
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 2.3e-32 142.5 130 55.4
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 3.3e-31 138.7 93 67.7
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 7.4e-31 137.5 127 54.3
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 6.7e-24 114.4 62 87.1
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 6.7e-24 114.4 62 87.1
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 6.7e-24 114.4 128 43.8
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 1.1e-23 113.6 72 80.6
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 1.3e-22 110.2 72 72.2
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 2.1e-22 109.4 71 76.1
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 8.1e-22 107.5 74 71.6
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 1.1e-21 107.1 71 71.8
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.1e-21 107.1 72 70.8
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 1.4e-21 106.7 62 79.0
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 1.8e-21 106.3 65 76.9
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 2.4e-21 105.9 62 79.0
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 5.3e-21 104.8 68 70.6
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 1.2e-20 103.6 69 69.6
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 5.8e-20 101.3 68 70.6
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 1.1e-18 97.1 76 63.2
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.1e-18 97.1 67 64.2
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 1.4e-18 96.7 64 73.4
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 1.6e-17 93.2 72 58.3
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 2.8e-14 82.4 118 37.3
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 6.3e-14 81.3 56 62.5
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 9.0e-13 77.4 69 49.3
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 2.6e-12 75.9 72 55.6
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.3e-11 73.6 49 69.4
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 6.1e-09 64.7 51 58.8
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.0e-08 63.9 58 43.1
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 1.8e-08 63.2 81 34.6
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 2.3e-08 62.8 105 31.4
PGSC0003DMG400003395 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.1e-07 60.5 51 54.9


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