Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 4.7e-143 511.1 253 100.0
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 5.2e-142 507.7 253 99.2
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 2.7e-114 415.6 248 82.7
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 3.1e-110 402.1 246 78.9
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 6.9e-110 401.0 246 80.5
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 1.2e-109 400.2 247 78.9
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.2e-109 400.2 251 78.5
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 1.2e-109 400.2 241 80.5
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.5e-109 399.8 251 78.5
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 2.0e-109 399.4 246 79.7
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 1.7e-108 396.4 251 77.7
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 1.9e-107 392.9 215 84.7
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 7.1e-107 391.0 247 75.3
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 2.1e-106 389.4 252 76.6
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 4.6e-106 388.3 251 77.3
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 5.1e-105 384.8 256 75.0
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 1.5e-104 383.3 250 76.0
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 2.5e-104 382.5 233 77.7
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 3.3e-104 382.1 257 73.9
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 5.6e-104 381.3 255 74.1
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 7.4e-104 380.9 264 73.1
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 1.3e-103 380.2 245 75.5
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 2.8e-103 379.0 249 75.9
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 2.8e-103 379.0 251 74.9
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 4.8e-103 378.3 252 74.6
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 6.2e-103 377.9 250 74.8
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 8.2e-103 377.5 243 76.5
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 1.1e-102 377.1 247 76.1
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 1.4e-102 376.7 248 76.2
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 1.8e-102 376.3 247 73.7
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 3.1e-102 375.6 286 67.8
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 3.1e-102 375.6 253 75.5
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 1.2e-101 373.6 219 80.4
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 1.2e-101 373.6 233 76.4
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 2.0e-101 372.9 231 76.6
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 5.8e-101 371.3 253 70.8
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 7.6e-101 370.9 248 75.0
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 1.3e-100 370.2 255 71.8
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 3.8e-100 368.6 250 73.6
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 4.9e-100 368.2 229 75.5
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 1.1e-99 367.1 249 72.7
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 1.4e-99 366.7 216 79.2
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 1.4e-99 366.7 248 72.2
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 3.2e-99 365.5 195 84.6
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 3.2e-99 365.5 247 72.9
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 1.2e-98 363.6 253 72.3
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 2.1e-98 362.8 252 72.2
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 2.1e-98 362.8 195 84.1
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 2.1e-98 362.8 200 83.0
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 3.5e-98 362.1 247 73.7
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 3.5e-98 362.1 241 73.9
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 4.6e-98 361.7 196 83.2
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 4.6e-98 361.7 237 74.7
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 7.9e-98 360.9 249 71.9
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 1.3e-97 360.1 252 71.0
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 1.3e-97 360.1 257 69.3
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 1.8e-97 359.8 252 71.4
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 6.7e-97 357.8 250 71.2
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 8.7e-97 357.5 249 71.1
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 1.5e-96 356.7 229 74.7
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 3.3e-96 355.5 252 69.4
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 9.7e-96 354.0 229 74.2
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 9.7e-96 354.0 209 80.4
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 1.3e-95 353.6 250 69.6
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.6e-95 353.2 247 71.7
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 2.1e-95 352.8 247 70.9
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 3.7e-95 352.1 238 71.4
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 4.8e-95 351.7 240 72.9
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 6.3e-95 351.3 251 69.7
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 5.3e-94 348.2 213 77.9
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 1.2e-93 347.1 239 69.9
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 3.8e-92 342.0 239 69.9
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 8.5e-92 340.9 193 80.3
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 4.2e-91 338.6 237 70.9
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 5.5e-91 338.2 255 67.1
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 1.3e-89 333.6 229 71.6
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 1.8e-89 333.2 244 68.4
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 3.9e-89 332.0 214 74.8
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 3.3e-88 328.9 210 78.1
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 2.8e-87 325.9 242 71.1
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.2e-85 320.5 248 62.9
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 3.4e-85 318.9 181 81.2
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 6.5e-84 314.7 199 76.9
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 6.5e-84 314.7 243 66.7
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 5.1e-81 305.1 205 67.8
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 2.6e-80 302.8 202 71.3
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 2.9e-76 289.3 200 66.0
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 3.8e-76 288.9 191 68.1
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 6.5e-76 288.1 224 66.1
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 3.9e-73 278.9 243 63.0
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 8.8e-73 277.7 175 68.0
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 3.3e-72 275.8 195 64.1
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 2.4e-70 269.6 228 61.8
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 6.5e-68 261.5 234 60.3
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 3.0e-65 252.7 136 84.6
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.3e-63 247.3 148 75.0
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.2e-56 224.2 245 52.7
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.0e-56 223.4 176 59.1
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 7.5e-56 221.5 242 53.3
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.7e-55 220.3 137 76.6
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 3.1e-54 216.1 212 54.7
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 1.3e-52 210.7 217 48.4
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 6.1e-50 201.8 200 56.5
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 9.8e-48 194.5 115 77.4
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 2.7e-45 186.4 103 78.6
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.6e-42 177.2 149 52.3
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.6e-40 169.9 105 74.3
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 2.7e-29 133.3 71 87.3
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 1.2e-26 124.4 70 78.6
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 3.1e-25 119.8 227 39.2
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 8.9e-17 91.7 60 73.3


User provided reference genes

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