Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020305 Camellia sinensis var. sinensis HOM05D006684 ORTHO05D008443 1.1e-125 453.4 240 100.0
Dinv32395 Davidia involucrata HOM05D006684 ORTHO05D008443 2.8e-76 289.3 241 70.1
GSVIVG01027546001 Vitis vinifera HOM05D006684 ORTHO05D008443 2.5e-61 239.6 246 59.8
Cfa010232 Carpinus fangiana HOM05D006684 ORTHO05D008443 5.8e-58 228.4 233 55.8
Ciclev10022036m.g Citrus clementina HOM05D006684 ORTHO05D008443 4.9e-57 225.3 239 56.5
TAR636G0929 Trochodendron aralioides HOM05D006684 ORTHO05D008443 1.5e-53 213.8 246 53.3
Nitab4.5_0010110g0010 Nicotiana tabacum HOM05D006684 ORTHO05D008443 1.9e-53 213.4 238 54.6
Atru.chr5.338 Acer truncatum HOM05D006684 ORTHO05D008443 3.3e-53 212.6 239 54.4
Sopen05g028070 Solanum pennellii HOM05D006684 ORTHO05D008443 6.2e-52 208.4 239 53.1
Cc02_g36430 Coffea canephora HOM05D006684 ORTHO05D008443 1.8e-51 206.8 232 53.9
Cpa.g.sc18.149 Carica papaya HOM05D006684 ORTHO05D008443 2.4e-51 206.5 235 53.2
PGSC0003DMG400021635 Solanum tuberosum HOM05D006684 ORTHO05D008443 2.4e-51 206.5 238 53.4
vmacro20994 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 7.6e-50 201.4 357 42.0
MELO3C022508.2 Cucumis melo HOM05D006684 ORTHO05D008443 6.4e-49 198.4 238 53.4
Aqoxy7G00540 Aquilegia oxysepala HOM05D006684 ORTHO05D008443 8.4e-49 198.0 241 51.9
CiPaw.01G260000 Carya illinoinensis HOM05D006684 ORTHO05D008443 8.4e-49 198.0 232 54.3
COL.COLO4_12585 Corchorus olitorius HOM05D006684 ORTHO05D008443 1.6e-47 193.7 233 50.6
Hma1.2p1_0053F.1_g030880 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 1.6e-47 193.7 247 52.2
Nn6g34351 Nelumbo nucifera HOM05D006684 ORTHO05D008443 3.5e-47 192.6 239 49.4
Sed0022399 Sechium edule HOM05D006684 ORTHO05D008443 3.5e-47 192.6 237 52.3
QL08p051764 Quercus lobata HOM05D006684 ORTHO05D008443 2.3e-46 189.9 236 50.8
Prupe.2G148900 Prunus persica HOM05D006684 ORTHO05D008443 3.0e-46 189.5 238 52.5
Eucgr.E01357 Eucalyptus grandis HOM05D006684 ORTHO05D008443 5.1e-46 188.7 232 51.7
Actinidia33456 Actinidia chinensis HOM05D006684 ORTHO05D008443 2.5e-45 186.4 146 71.2
TWI59G0969 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 3.3e-45 186.0 238 50.0
ECA240G0119 Erigeron canadensis HOM05D006684 ORTHO05D008443 1.3e-44 184.1 239 52.7
PGR042G1390 Punica granatum HOM05D006684 ORTHO05D008443 1.4e-43 180.6 241 50.2
LjContig00136g0018410 Lotus japonicus HOM05D006684 ORTHO05D008443 2.4e-43 179.9 240 48.8
Manes.05G043400 Manihot esculenta HOM05D006684 ORTHO05D008443 9.0e-43 177.9 240 49.2
Rhsim01G0161500 Rhododendron simsii HOM05D006684 ORTHO05D008443 9.0e-43 177.9 171 62.0
RcHm_v2.0_Chr1g0351131 Rosa chinensis HOM05D006684 ORTHO05D008443 9.0e-43 177.9 238 52.9
EL10Ac1g00926 Beta vulgaris HOM05D006684 ORTHO05D008443 2.0e-42 176.8 244 47.5
CsaV3_6G006090 Cucumis sativus L. HOM05D006684 ORTHO05D008443 2.6e-42 176.4 238 51.3
Glyma.09G267200 Glycine max HOM05D006684 ORTHO05D008443 5.8e-42 175.3 237 49.8
FAN01G2432 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.3e-41 174.1 238 50.4
MD02G1199700 Malus domestica HOM05D006684 ORTHO05D008443 3.8e-41 172.6 238 50.4
Thecc.01G373000 Theobroma cacao HOM05D006684 ORTHO05D008443 4.9e-41 172.2 236 47.0
CANSAT94G0012 Cannabis sativa HOM05D006684 ORTHO05D008443 1.1e-40 171.0 242 49.2
Gorai.007G092800 Gossypium raimondii HOM05D006684 ORTHO05D008443 1.1e-40 171.0 237 46.4
MSTRG.4882 Avicennia marina HOM05D006684 ORTHO05D008443 1.4e-40 170.6 240 47.9
Sp4g27550 Schrenkiella parvula HOM05D006684 ORTHO05D008443 1.4e-40 170.6 238 46.6
Gohir.A11G082800 Gossypium hirsutum HOM05D006684 ORTHO05D008443 2.4e-40 169.9 234 45.7
FvH4_7g12340 Fragaria vesca HOM05D006684 ORTHO05D008443 3.2e-40 169.5 237 49.4
FAN06G2821 Fragaria x ananassa HOM05D006684 ORTHO05D008443 3.2e-40 169.5 237 49.4
FAN06G3889 Fragaria x ananassa HOM05D006684 ORTHO05D008443 3.2e-40 169.5 237 49.4
Gohir.D11G086900 Gossypium hirsutum HOM05D006684 ORTHO05D008443 4.2e-40 169.1 237 46.4
VMungo1383G3715 Vigna mungo HOM05D006684 ORTHO05D008443 4.2e-40 169.1 238 47.5
Manes.12G048300 Manihot esculenta HOM05D006684 ORTHO05D008443 7.1e-40 168.3 243 46.1
Hund17005 Selenicereus undatus HOM05D006684 ORTHO05D008443 1.6e-39 167.2 235 47.7
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea HOM05D006684 ORTHO05D008443 2.7e-39 166.4 244 48.0
SalBow5G0966 Salvia bowleyana HOM05D006684 ORTHO05D008443 3.5e-39 166.0 239 47.7
SGA_v2.0_scaffold11G05605 Striga asiatica HOM05D006684 ORTHO05D008443 3.5e-39 166.0 234 46.6
Potri.014G072400 Populus trichocarpa HOM05D006684 ORTHO05D008443 4.6e-39 165.6 237 47.3
Thhalv10001611m.g Eutrema salsugineum HOM05D006684 ORTHO05D008443 2.3e-38 163.3 238 47.1
SalBow5G5079 Salvia bowleyana HOM05D006684 ORTHO05D008443 2.3e-38 163.3 239 47.3
CAN.G333.1 Capsicum annuum HOM05D006684 ORTHO05D008443 3.0e-38 162.9 239 46.0
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 5.1e-38 162.2 235 46.4
ClCG06G000300 Citrullus lanatus HOM05D006684 ORTHO05D008443 6.7e-38 161.8 283 42.4
Lalb_Chr03g0039091 Lupinus albus HOM05D006684 ORTHO05D008443 6.7e-38 161.8 238 45.4
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea HOM05D006684 ORTHO05D008443 8.7e-38 161.4 242 46.3
FAN10G0264 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.5e-37 160.6 238 48.7
BcaB06g29418 Brassica carinata HOM05D006684 ORTHO05D008443 2.5e-37 159.8 233 46.4
HanXRQChr03g0093671 Helianthus annuus HOM05D006684 ORTHO05D008443 3.3e-37 159.5 243 47.7
CDE04G1869 Ceratophyllum demersum HOM05D006684 ORTHO05D008443 4.3e-37 159.1 246 47.2
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 7.4e-37 158.3 233 45.1
Nitab4.5_0001702g0200 Nicotiana tabacum HOM05D006684 ORTHO05D008443 7.4e-37 158.3 237 44.7
Phvul.008G074700 Phaseolus vulgaris HOM05D006684 ORTHO05D008443 1.6e-36 157.1 235 45.5
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 3.7e-36 156.0 233 44.6
Peaxi162Scf00207g00165 Petunia axillaris HOM05D006684 ORTHO05D008443 3.7e-36 156.0 233 46.8
AL4G44700 Arabidopsis lyrata HOM05D006684 ORTHO05D008443 4.8e-36 155.6 237 43.9
BcaC02g07085 Brassica carinata HOM05D006684 ORTHO05D008443 4.8e-36 155.6 234 46.2
FAN03G1779 Fragaria x ananassa HOM05D006684 ORTHO05D008443 6.2e-36 155.2 248 46.4
THA.LOC104801995 Tarenaya hassleriana HOM05D006684 ORTHO05D008443 2.4e-35 153.3 245 45.3
Sc02g0002410 Simmondsia chinensis HOM05D006684 ORTHO05D008443 3.1e-35 152.9 213 46.0
PSO478G1842 Papaver somniferum HOM05D006684 ORTHO05D008443 5.3e-35 152.1 250 44.8
TPR.G37765 Trifolium pratense HOM05D006684 ORTHO05D008443 1.5e-34 150.6 236 44.5
FAN10G2097 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.0e-34 150.2 236 46.6
CARHR140710 Cardamine hirsuta HOM05D006684 ORTHO05D008443 2.6e-34 149.8 235 44.3
Medtr7g075640 Medicago truncatula HOM05D006684 ORTHO05D008443 5.8e-34 148.7 238 43.3
Aa31LG1G27020 Aethionema arabicum HOM05D006684 ORTHO05D008443 2.9e-33 146.4 249 43.0
Solyc05g048750.3 Solanum lycopersicum HOM05D006684 ORTHO05D008443 3.8e-33 146.0 188 51.1
Os06g0129800 Oryza sativa ssp. japonica HOM05D006684 ORTHO05D008443 4.9e-33 145.6 241 42.3
Zm00001eb378390 Zea mays HOM05D006684 ORTHO05D008443 8.4e-33 144.8 230 42.6
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 1.9e-32 143.7 233 42.5
Duzib133G0994 Durio zibethinus HOM05D006684 ORTHO05D008443 1.6e-31 140.6 235 41.7
Carub.0004s2814 Capsella rubella HOM05D006684 ORTHO05D008443 6.0e-31 138.7 238 41.6
AUR62004244 Chenopodium quinoa HOM05D006684 ORTHO05D008443 1.8e-30 137.1 225 44.0
Lsat_1_v5_gn_3_135520 Lactuca sativa HOM05D006684 ORTHO05D008443 3.0e-30 136.3 244 44.7
Manes.12G048301 Manihot esculenta HOM05D006684 ORTHO05D008443 3.9e-30 136.0 237 41.4
AT2G45520 Arabidopsis thaliana HOM05D006684 ORTHO05D008443 6.7e-30 135.2 233 42.5
Duzib138G0092 Durio zibethinus HOM05D006684 ORTHO05D008443 1.1e-29 134.4 198 48.0
Migut.N01586 Erythranthe guttata HOM05D006684 ORTHO05D008443 3.3e-29 132.9 141 58.2
Manes.12G053501 Manihot esculenta HOM05D006684 ORTHO05D008443 4.8e-28 129.0 237 40.5
BolC4t22271H Brassica oleracea HOM05D006684 ORTHO05D008443 5.3e-27 125.6 230 42.6
vmacro20995 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 2.0e-26 123.6 162 50.6
PSO782G3084 Papaver somniferum HOM05D006684 ORTHO05D008443 2.6e-26 123.2 189 47.1
Haze_16738 Corylus avellana HOM05D006684 ORTHO05D008443 3.4e-26 122.9 150 49.3
AUR62013604 Chenopodium quinoa HOM05D006684 ORTHO05D008443 4.5e-26 122.5 239 40.6
Duzib138G0657 Durio zibethinus HOM05D006684 ORTHO05D008443 2.1e-23 113.6 152 47.4
unitig_578.g16483 Utricularia gibba HOM05D006684 ORTHO05D008443 2.1e-23 113.6 210 41.9
Oeu036610.1 Olea europaea HOM05D006684 ORTHO05D008443 2.7e-23 113.2 87 69.0
BraA05t19524Z Brassica rapa HOM05D006684 ORTHO05D008443 1.0e-22 111.3 227 39.2
Ah.07g198740 Amaranthus hybridus HOM05D006684 ORTHO05D008443 2.3e-22 110.2 202 39.1
TWI23G1019 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 3.0e-22 109.8 134 52.2
SEGI_35511 Sequoiadendron giganteum HOM05D006684 ORTHO05D008443 7.4e-21 105.1 240 35.8
ATR0757G101 Amborella trichopoda HOM05D006684 ORTHO05D008443 2.2e-20 103.6 195 40.5
Haze_16739 Corylus avellana HOM05D006684 ORTHO05D008443 2.2e-20 103.6 68 70.6
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 8.2e-20 101.7 142 47.9
Ca_07836_v3 Cicer arietinum L. HOM05D006684 ORTHO05D008443 1.4e-19 100.9 71 67.6
MBI12_g38018_MAGBIO Magnolia biondii HOM05D006684 ORTHO05D008443 1.0e-17 94.7 154 42.9
Psat3g104080 Pisum sativum HOM05D006684 ORTHO05D008443 1.0e-17 94.7 99 53.5
Hma1.2p1_0053F.1_g030890 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 5.0e-17 92.4 123 49.6
SGA_v2.0_scaffold43G16466 Striga asiatica HOM05D006684 ORTHO05D008443 3.2e-16 89.7 123 46.3
Zm00001eb269540 Zea mays HOM05D006684 ORTHO05D008443 2.7e-15 86.7 93 53.8
Pp3c22_10350 Physcomitrium patens HOM05D006684 ORTHO05D008443 8.2e-12 75.1 245 29.8
AagrBONN_evm.TU.Sc2ySwM_344.4110 Anthoceros agrestis HOM05D006684 ORTHO05D008443 5.3e-11 72.4 244 30.7
HPP92_020257 Vanilla planifolia HOM05D006684 ORTHO05D008443 3.4e-10 69.7 213 32.9
Mapoly0084s0081 Marchantia polymorpha HOM05D006684 ORTHO05D008443 2.2e-09 67.0 239 31.4
SMO347G0023 Selaginella moellendorffii HOM05D006684 ORTHO05D008443 2.5e-08 63.5 226 29.6


User provided reference genes

Program Settings