Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020235 Camellia sinensis var. sinensis HOM05D000400 ORTHO05D111210 2.7e-166 588.6 289 100.0
Actinidia20242 Actinidia chinensis HOM05D000400 ORTHO05D000575 1.1e-15 88.2 153 37.9
ECA236G3209 Erigeron canadensis HOM05D000400 ORTHO05D000575 8.1e-14 82.0 170 36.5
PGR031G3197 Punica granatum HOM05D000400 ORTHO05D000575 7.6e-12 75.5 167 34.1
Actinidia10138 Actinidia chinensis HOM05D000331 ORTHO05D000732 9.9e-12 75.1 161 37.3
Nitab4.5_0008878g0010 Nicotiana tabacum HOM05D000400 ORTHO05D000575 1.3e-11 74.7 167 35.3
Prupe.2G188400 Prunus persica HOM05D000400 ORTHO05D000575 1.7e-11 74.3 170 36.5
Lj7C500T10 Lonicera japonica HOM05D000400 ORTHO05D000575 2.9e-11 73.6 167 37.7
CAN.G1415.33 Capsicum annuum HOM05D000400 ORTHO05D000575 6.4e-11 72.4 171 32.2
Dinv32588 Davidia involucrata HOM05D000400 ORTHO05D000575 6.4e-11 72.4 166 34.9
Gohir.A07G137800 Gossypium hirsutum HOM05D000400 ORTHO05D000575 8.4e-11 72.0 168 33.3
Nitab4.5_0002326g0010 Nicotiana tabacum HOM05D000400 ORTHO05D000575 8.4e-11 72.0 169 33.7
Duzib084G0395 Durio zibethinus HOM05D000400 ORTHO05D000575 1.9e-10 70.9 232 28.9
Peaxi162Scf00786g00124 Petunia axillaris HOM05D000400 ORTHO05D000575 1.9e-10 70.9 166 31.9
Duzib138G1219 Durio zibethinus HOM05D000400 ORTHO05D000575 3.2e-10 70.1 167 33.5
PGSC0003DMG400047137 Solanum tuberosum HOM05D000400 ORTHO05D000575 3.2e-10 70.1 165 37.0
Gorai.001G154900 Gossypium raimondii HOM05D000400 ORTHO05D000575 7.1e-10 68.9 168 32.7
QL04p060891 Quercus lobata HOM05D000400 ORTHO05D000575 7.1e-10 68.9 179 32.4
QL09p009406 Quercus lobata HOM05D000400 ORTHO05D000575 1.6e-09 67.8 168 32.1
PGSC0003DMG400042929 Solanum tuberosum HOM05D000400 ORTHO05D000575 2.1e-09 67.4 166 36.7
Thecc.01G342500 Theobroma cacao HOM05D000400 ORTHO05D000575 2.1e-09 67.4 168 32.7
Aqoxy5G03921 Aquilegia oxysepala HOM05D000400 ORTHO05D000575 2.7e-09 67.0 170 34.1
HanXRQChr04g0120171 Helianthus annuus HOM05D000400 ORTHO05D000575 4.6e-09 66.2 167 33.5
CAN.G1126.20 Capsicum annuum HOM05D000400 ORTHO05D000575 6.0e-09 65.9 164 33.5
Cpa.g.sc96.16 Carica papaya HOM05D000400 ORTHO05D000575 6.0e-09 65.9 169 32.5
Dinv32587 Davidia involucrata HOM05D000400 ORTHO05D000575 6.0e-09 65.9 166 31.3
Lj3A906T60 Lonicera japonica HOM05D000400 ORTHO05D000575 7.8e-09 65.5 168 31.0
PSO832G2270 Papaver somniferum HOM05D000400 ORTHO05D000575 1.0e-08 65.1 168 32.1
Sopen01g007520 Solanum pennellii HOM05D000400 ORTHO05D000575 1.0e-08 65.1 163 36.2
CiPaw.06G010700 Carya illinoinensis HOM05D000400 ORTHO05D000575 1.3e-08 64.7 167 31.1
FAN18G1050 Fragaria x ananassa HOM05D000400 ORTHO05D000575 1.3e-08 64.7 169 27.8
PSO063G3967 Papaver somniferum HOM05D000400 ORTHO05D000575 1.3e-08 64.7 159 30.2
CiPaw.06G032100 Carya illinoinensis HOM05D000400 ORTHO05D000575 1.7e-08 64.3 167 30.5
FvH4_7g31660 Fragaria vesca HOM05D000400 ORTHO05D000575 1.7e-08 64.3 173 29.5
FAN06G2219 Fragaria x ananassa HOM05D000400 ORTHO05D000575 1.7e-08 64.3 173 29.5
FAN06G4433 Fragaria x ananassa HOM05D000400 ORTHO05D000575 1.7e-08 64.3 173 29.5
THA.LOC104798894 Tarenaya hassleriana HOM05D000400 ORTHO05D000575 1.7e-08 64.3 165 29.7
CiPaw.01G076200 Carya illinoinensis HOM05D000400 ORTHO05D000575 2.3e-08 63.9 169 34.3
CiPaw.06G010900 Carya illinoinensis HOM05D000400 ORTHO05D000575 2.3e-08 63.9 166 33.7
FAN03G1454 Fragaria x ananassa HOM05D000400 ORTHO05D000575 2.3e-08 63.9 173 28.9
Manes.02G142600 Manihot esculenta HOM05D000400 ORTHO05D000575 2.3e-08 63.9 172 24.4
Cfa003804 Carpinus fangiana HOM05D000400 ORTHO05D000575 3.9e-08 63.2 176 33.0
CiPaw.06G011000 Carya illinoinensis HOM05D000400 ORTHO05D000575 3.9e-08 63.2 167 32.9
Eucgr.D02376 Eucalyptus grandis HOM05D000400 ORTHO05D000575 3.9e-08 63.2 168 29.2
Potri.012G014200 Populus trichocarpa HOM05D000400 ORTHO05D000575 3.9e-08 63.2 162 32.7
SHI54955 Sapria himalayana HOM05D000400 ORTHO05D000575 3.9e-08 63.2 160 33.1
Manes.05G022900 Manihot esculenta HOM05D000400 ORTHO05D000575 5.1e-08 62.8 166 31.3
Haze_00222 Corylus avellana HOM05D000400 ORTHO05D000575 6.6e-08 62.4 173 31.8
COL.COLO4_11274 Corchorus olitorius HOM05D000400 ORTHO05D000575 8.7e-08 62.0 166 30.7
Duzib138G0623 Durio zibethinus HOM05D000400 ORTHO05D000575 8.7e-08 62.0 169 33.7
FAN13G1876 Fragaria x ananassa HOM05D000400 ORTHO05D000575 8.7e-08 62.0 173 26.6
Hma1.2p1_1659F.1_g296170 Hydrangea macrophylla HOM05D000400 ORTHO05D000575 8.7e-08 62.0 161 31.1
Solyc01g011430.4 Solanum lycopersicum HOM05D000400 ORTHO05D000575 8.7e-08 62.0 167 35.3
TAR375G0269 Trochodendron aralioides HOM05D000400 ORTHO05D000575 8.7e-08 62.0 161 31.7
TAR375G1097 Trochodendron aralioides HOM05D000400 ORTHO05D000575 8.7e-08 62.0 161 31.7
Ah.13g070200 Amaranthus hybridus HOM05D000400 ORTHO05D000575 1.1e-07 61.6 172 29.7
CiPaw.06G010800 Carya illinoinensis HOM05D000400 ORTHO05D000575 1.1e-07 61.6 167 29.3
Ciclev10019739m.g Citrus clementina HOM05D000400 ORTHO05D000575 1.1e-07 61.6 168 32.1
Gohir.A07G137900 Gossypium hirsutum HOM05D000400 ORTHO05D000575 1.1e-07 61.6 176 33.5
COL.COLO4_06287 Corchorus olitorius HOM05D000400 ORTHO05D000575 1.5e-07 61.2 174 33.9
Gohir.D07G143000 Gossypium hirsutum HOM05D000400 ORTHO05D000575 1.5e-07 61.2 176 33.5
Gorai.001G155000 Gossypium raimondii HOM05D000400 ORTHO05D000575 1.5e-07 61.2 176 33.5
PSO063G6110 Papaver somniferum HOM05D000400 ORTHO05D000575 1.5e-07 61.2 171 33.3
GSVIVG01027135001 Vitis vinifera HOM05D000400 ORTHO05D000575 1.5e-07 61.2 170 28.8
Sabra12G0017600 Salix brachista HOM05D000400 ORTHO05D000575 1.9e-07 60.8 168 28.0
A03p15170 Brassica napus HOM05D000400 ORTHO05D000575 2.5e-07 60.5 165 29.1
Nitab4.5_0000838g0160 Nicotiana tabacum HOM05D000400 ORTHO05D000575 2.5e-07 60.5 169 30.8
GSVIVG01027145001 Vitis vinifera HOM05D000400 ORTHO05D000575 2.5e-07 60.5 163 32.5
A02p17700 Brassica napus HOM05D000400 ORTHO05D000575 4.3e-07 59.7 165 23.6
BraA02t06817Z Brassica rapa HOM05D000400 ORTHO05D000575 4.3e-07 59.7 165 23.6
BcaC03g14427 Brassica carinata HOM05D000400 ORTHO05D000575 5.6e-07 59.3 164 28.7
C02p18410 Brassica napus HOM05D000400 ORTHO05D000575 5.6e-07 59.3 164 28.7
BolC2t07980H Brassica oleracea HOM05D000400 ORTHO05D000575 5.6e-07 59.3 164 28.7
BcaB05g22036 Brassica carinata HOM05D000400 ORTHO05D000575 7.3e-07 58.9 168 29.2
FAN10G2058 Fragaria x ananassa HOM05D000400 ORTHO05D000575 7.3e-07 58.9 163 28.2
Peaxi162Scf00786g00127 Petunia axillaris HOM05D000400 ORTHO05D000575 7.3e-07 58.9 169 28.4
Prupe.2G310700 Prunus persica HOM05D000400 ORTHO05D000575 7.3e-07 58.9 165 33.9
GSVIVG01038705001 Vitis vinifera HOM05D000400 ORTHO05D000575 7.3e-07 58.9 168 28.0
BcaC03g15335 Brassica carinata HOM05D000400 ORTHO05D000575 9.6e-07 58.5 174 27.0
A02p11090 Brassica napus HOM05D000400 ORTHO05D000575 9.6e-07 58.5 167 28.7
C02p29410 Brassica napus HOM05D000400 ORTHO05D000575 9.6e-07 58.5 174 27.0
BolC2t08992H Brassica oleracea HOM05D000400 ORTHO05D000575 9.6e-07 58.5 174 27.0
BraA02t06172Z Brassica rapa HOM05D000400 ORTHO05D000575 9.6e-07 58.5 167 28.7
FAN06G1384 Fragaria x ananassa HOM05D000400 ORTHO05D000575 1.3e-06 58.2 160 28.1
PGSC0003DMG400000110 Solanum tuberosum HOM05D000400 ORTHO05D000575 1.3e-06 58.2 170 28.2
AL8G28100 Arabidopsis lyrata HOM05D000400 ORTHO05D000575 2.1e-06 57.4 146 28.8
BraA03t10811Z Brassica rapa HOM05D000400 ORTHO05D000575 2.1e-06 57.4 165 28.5
FAN10G2146 Fragaria x ananassa HOM05D000400 ORTHO05D000575 2.1e-06 57.4 163 28.2
QL09p010284 Quercus lobata HOM05D000400 ORTHO05D000575 2.1e-06 57.4 164 29.9
Actinidia16823 Actinidia chinensis HOM05D000400 ORTHO05D000575 2.8e-06 57.0 153 30.7
Eucgr.K00371 Eucalyptus grandis HOM05D000400 ORTHO05D000575 2.8e-06 57.0 163 30.7
Hma1.2p1_2976F.1_g331180 Hydrangea macrophylla HOM05D000400 ORTHO05D000575 2.8e-06 57.0 168 32.1
AL726U10010 Arabidopsis lyrata HOM05D000400 ORTHO05D000575 3.6e-06 56.6 162 28.4
AT5G53390 Arabidopsis thaliana HOM05D000400 ORTHO05D000575 3.6e-06 56.6 169 29.6
CiPaw.06G010600 Carya illinoinensis HOM05D000400 ORTHO05D000575 3.6e-06 56.6 166 31.3
Ciclev10019854m.g Citrus clementina HOM05D000400 ORTHO05D000575 4.8e-06 56.2 165 29.7
Solyc10g009430.3 Solanum lycopersicum HOM05D000400 ORTHO05D000575 4.8e-06 56.2 168 30.4
Lj3A906G54 Lonicera japonica HOM05D000400 ORTHO05D000575 6.2e-06 55.8 174 29.9
Manes.18G116000 Manihot esculenta HOM05D000400 ORTHO05D000575 6.2e-06 55.8 163 33.1
Nn3g18996 Nelumbo nucifera HOM05D000400 ORTHO05D000575 6.2e-06 55.8 164 28.0
Sabra19G0083300 Salix brachista HOM05D000400 ORTHO05D000575 6.2e-06 55.8 173 28.9
C03p65780 Brassica napus HOM05D000400 ORTHO05D000575 8.1e-06 55.5 162 26.5
BolC3t18828H Brassica oleracea HOM05D000400 ORTHO05D000575 8.1e-06 55.5 162 26.5
ECA236G2066 Erigeron canadensis HOM05D000400 ORTHO05D000575 8.1e-06 55.5 164 31.1
Potri.019G070975 Populus trichocarpa HOM05D000400 ORTHO05D000575 8.1e-06 55.5 168 31.5


User provided reference genes

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