Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 2.1e-244 848.6 429 100.0
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 2.6e-242 841.6 427 99.5
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 2.1e-191 672.5 447 80.5
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 1.8e-190 669.5 425 82.8
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 2.8e-180 635.6 403 79.7
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 2.9e-177 625.5 381 81.9
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 1.1e-176 623.6 420 76.0
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 4.2e-176 621.7 402 78.1
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 1.6e-175 619.8 403 78.4
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 2.8e-172 609.0 383 78.6
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 1.8e-171 606.3 405 75.8
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 2.4e-171 605.9 416 74.3
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 2.0e-170 602.8 426 73.2
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 3.8e-169 598.6 403 76.2
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 5.5e-168 594.7 427 71.2
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 1.2e-167 593.6 406 74.4
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 2.1e-167 592.8 442 69.2
Atru.chr12.1880 Acer truncatum HOM05D007064 ORTHO05D008772 6.1e-167 591.3 424 72.9
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 6.1e-167 591.3 372 77.7
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 3.9e-166 588.6 377 77.7
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 3.9e-166 588.6 426 70.7
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 6.7e-166 587.8 394 75.4
COL.COLO4_15235 Corchorus olitorius HOM05D007064 ORTHO05D008772 8.8e-166 587.4 381 77.2
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 1.1e-165 587.0 366 79.8
PSO063G1297 Papaver somniferum HOM05D007064 ORTHO05D008772 1.5e-165 586.6 426 71.6
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 3.3e-165 585.5 410 72.0
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 7.4e-165 584.3 426 71.1
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 2.8e-164 582.4 426 70.9
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 3.7e-164 582.0 425 70.8
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 4.8e-164 581.6 384 76.0
RcHm_v2.0_Chr4g0388921 Rosa chinensis HOM05D007064 ORTHO05D008772 1.1e-163 580.5 384 75.5
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 2.4e-163 579.3 384 75.8
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 3.1e-163 578.9 371 76.5
PSO782G0881 Papaver somniferum HOM05D007064 ORTHO05D008772 9.1e-163 577.4 406 72.9
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 7.7e-162 574.3 370 76.8
CsaV3_3G050060 Cucumis sativus L. HOM05D007064 ORTHO05D008772 1.0e-161 573.9 430 67.4
Cc02_g00210 Coffea canephora HOM05D007064 ORTHO05D008772 2.2e-161 572.8 385 75.1
HanXRQChr14g0451581 Helianthus annuus HOM05D007064 ORTHO05D008772 2.9e-161 572.4 404 71.5
Aqoxy3G02225 Aquilegia oxysepala HOM05D007064 ORTHO05D008772 6.5e-161 571.2 428 70.1
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 5.5e-160 568.2 374 75.7
Sabra19G0062000 Salix brachista HOM05D007064 ORTHO05D008772 9.4e-160 567.4 381 76.4
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 2.7e-159 565.8 371 74.1
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 4.7e-159 565.1 385 74.8
Sp6g27320 Schrenkiella parvula HOM05D007064 ORTHO05D008772 2.3e-158 562.8 384 73.2
THA.LOC104820893 Tarenaya hassleriana HOM05D007064 ORTHO05D008772 5.2e-158 561.6 399 72.2
Thhalv10013656m.g Eutrema salsugineum HOM05D007064 ORTHO05D008772 8.8e-158 560.8 384 73.2
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 1.2e-157 560.5 372 72.8
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 2.0e-157 559.7 371 73.3
Dinv17250 Davidia involucrata HOM05D007064 ORTHO05D008772 4.4e-157 558.5 373 80.4
arahy.Tifrunner.gnm1.ann1.P291P9 Arachis hypogaea HOM05D007064 ORTHO05D008772 5.7e-157 558.1 377 73.5
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 5.7e-157 558.1 412 70.1
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 3.7e-156 555.4 371 72.5
AL6G27830 Arabidopsis lyrata HOM05D007064 ORTHO05D008772 4.8e-156 555.1 384 72.7
AT5G16810 Arabidopsis thaliana HOM05D007064 ORTHO05D008772 1.1e-155 553.9 384 72.1
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 1.4e-155 553.5 382 74.6
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 1.8e-155 553.1 418 69.4
arahy.Tifrunner.gnm1.ann1.EDBW82 Arachis hypogaea HOM05D007064 ORTHO05D008772 5.3e-155 551.6 422 67.3
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 7.0e-155 551.2 374 71.4
BolC2t06775H Brassica oleracea HOM05D007064 ORTHO05D008772 2.7e-154 549.3 370 73.5
BcaC03g18516 Brassica carinata HOM05D007064 ORTHO05D008772 5.9e-154 548.1 370 73.2
C02p08600 Brassica napus HOM05D007064 ORTHO05D008772 5.9e-154 548.1 370 73.2
AUR62028195 Chenopodium quinoa HOM05D007064 ORTHO05D008772 2.2e-153 546.2 372 71.5
Lj1A1033T73 Lonicera japonica HOM05D007064 ORTHO05D008772 5.0e-153 545.0 376 76.1
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 2.5e-152 542.7 387 70.0
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 5.5e-152 541.6 344 76.7
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 5.2e-150 535.0 405 67.4
BcaNung04953 Brassica carinata HOM05D007064 ORTHO05D008772 8.8e-150 534.3 384 70.1
Medtr5g006230 Medicago truncatula HOM05D007064 ORTHO05D008772 2.6e-149 532.7 388 70.9
ClCG09G013090 Citrullus lanatus HOM05D007064 ORTHO05D008772 5.7e-149 531.6 367 71.7
ATR0829G191 Amborella trichopoda HOM05D007064 ORTHO05D008772 1.3e-148 530.4 384 68.5
vmacro06523 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 1.7e-148 530.0 457 65.2
TPR.G37970 Trifolium pratense HOM05D007064 ORTHO05D008772 8.3e-148 527.7 369 72.4
BraA02t05344Z Brassica rapa HOM05D007064 ORTHO05D008772 3.1e-147 525.8 376 70.5
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 5.4e-147 525.0 371 71.2
A02p03790 Brassica napus HOM05D007064 ORTHO05D008772 2.9e-145 519.2 378 69.0
Os02g0694800 Oryza sativa ssp. japonica HOM05D007064 ORTHO05D008772 6.6e-145 518.1 404 65.3
Zm00001eb187800 Zea mays HOM05D007064 ORTHO05D008772 1.5e-144 516.9 394 65.5
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 3.3e-144 515.8 372 69.9
Aa31LG11G12770 Aethionema arabicum HOM05D007064 ORTHO05D008772 1.2e-143 513.8 409 65.3
Prupe.1G025200 Prunus persica HOM05D007064 ORTHO05D008772 9.8e-141 504.2 322 78.9
HPP92_025673 Vanilla planifolia HOM05D007064 ORTHO05D008772 9.2e-139 497.7 380 66.8
MELO3C003312.2 Cucumis melo HOM05D007064 ORTHO05D008772 4.3e-136 488.8 332 72.6
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 7.3e-136 488.0 419 62.8
CDE11G0292 Ceratophyllum demersum HOM05D007064 ORTHO05D008772 1.3e-132 477.2 372 65.1
Hma1.2p1_0649F.1_g195260 Hydrangea macrophylla HOM05D007064 ORTHO05D008772 2.9e-132 476.1 282 85.5
SEGI_11081 Sequoiadendron giganteum HOM05D007064 ORTHO05D008772 2.0e-130 469.9 393 62.1
Manes.09G127400 Manihot esculenta HOM05D007064 ORTHO05D008772 1.6e-127 460.3 371 66.6
Potri.019G050500 Populus trichocarpa HOM05D007064 ORTHO05D008772 6.8e-126 454.9 310 76.1
Sed0013285 Sechium edule HOM05D007064 ORTHO05D008772 1.3e-124 450.7 288 74.7
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 3.0e-121 439.5 282 75.9
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 5.1e-121 438.7 270 80.4
Psat2g189080 Pisum sativum HOM05D007064 ORTHO05D008772 8.9e-118 427.9 315 70.8
Carub.0006s1503 Capsella rubella HOM05D007064 ORTHO05D008772 9.5e-112 407.9 277 74.4
Glyma.01G233100 Glycine max HOM05D007064 ORTHO05D008772 3.5e-106 389.4 322 62.7
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 3.5e-106 389.4 391 57.8
Pp3c23_10770 Physcomitrium patens HOM05D007064 ORTHO05D008772 3.5e-106 389.4 421 49.4
CARHR196350 Cardamine hirsuta HOM05D007064 ORTHO05D008772 1.7e-105 387.1 293 65.9
Mapoly0096s0061 Marchantia polymorpha HOM05D007064 ORTHO05D008772 6.9e-102 375.2 400 49.8
AagrBONN_evm.TU.Sc2ySwM_344.2887 Anthoceros agrestis HOM05D007064 ORTHO05D008772 7.9e-74 282.0 324 49.4
SMO343G0012 Selaginella moellendorffii HOM05D007064 ORTHO05D008772 1.1e-59 235.0 400 38.5
Cpa.g.sc43.97 Carica papaya HOM05D007064 ORTHO05D008772 1.0e-49 201.8 192 59.4
CBR_g8898 Chara braunii HOM05D007064 ORTHO05D008772 2.9e-44 183.7 126 68.3
Psat0s4094g0040 Pisum sativum HOM05D007064 ORTHO05D008772 1.6e-42 177.9 107 78.5
CBR_g8900 Chara braunii HOM05D007064 ORTHO05D000002 6.5e-36 156.0 210 44.8
Cpa.g.sc43.98 Carica papaya HOM05D007064 ORTHO05D008772 2.0e-32 144.4 72 95.8
Oeu043948.1 Olea europaea HOM05D007064 ORTHO05D008772 5.4e-30 136.3 82 82.9
Lj1A1033G66 Lonicera japonica HOM05D007064 ORTHO05D008772 1.6e-21 108.2 55 90.9
TPR.G40530 Trifolium pratense HOM05D007064 ORTHO05D008772 1.5e-19 101.7 55 83.6
HanXRQChr01g0005821 Helianthus annuus HOM05D007064 ORTHO05D008772 4.7e-18 96.7 70 65.7
PRCOL_00004348 Prasinoderma coloniale HOM05D007064 ORTHO05D008772 2.8e-10 70.9 226 29.2
CBR_g6359 Chara braunii HOM05D007064 ORTHO05D008772 1.8e-09 68.2 96 40.6
Pp3c10_6850 Physcomitrium patens HOM05D002406 ORTHO05D006947 2.3e-09 67.8 370 25.7
Mapoly0001s0031 Marchantia polymorpha HOM05D002406 ORTHO05D006947 3.1e-09 67.4 364 26.9
vmacro06524 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 3.7e-07 60.5 33 84.8
CDE09G1163 Ceratophyllum demersum HOM05D002406 ORTHO05D007964 4.9e-07 60.1 282 25.2
TAR629G2259 Trochodendron aralioides HOM05D002406 ORTHO05D007964 8.3e-07 59.3 282 26.6
MBI13_g34060_MAGBIO Magnolia biondii HOM05D002406 ORTHO05D007964 1.9e-06 58.2 286 25.9
CsaV3_5G025330 Cucumis sativus L. HOM05D002406 ORTHO05D007964 4.1e-06 57.0 283 25.8
SGA_v2.0_scaffold14G06823 Striga asiatica HOM05D002406 ORTHO05D007964 4.1e-06 57.0 279 24.7
CiPaw.15G003700 Carya illinoinensis HOM05D002406 ORTHO05D007964 5.4e-06 56.6 278 25.5
Sed0011685 Sechium edule HOM05D002406 ORTHO05D007964 7.1e-06 56.2 341 24.3
SMO364G0095 Selaginella moellendorffii HOM05D002406 ORTHO05D007964 7.1e-06 56.2 263 24.3
Cc11_g10600 Coffea canephora HOM05D002406 ORTHO05D007964 9.2e-06 55.8 287 25.1
Glyma.02G100000 Glycine max HOM05D002406 ORTHO05D007964 9.2e-06 55.8 286 24.1
MCO05G602 Micromonas commoda HOM05D007064 ORTHO05D008772 9.2e-06 55.8 192 24.5


User provided reference genes

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