Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 1.0e-101 373.6 219 100.0
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 4.0e-29 132.5 131 66.4
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 1.5e-28 130.6 131 61.1
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 1.3e-27 127.5 129 60.5
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 4.8e-27 125.6 132 54.5
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 4.8e-27 125.6 132 54.5
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 8.2e-27 124.8 132 55.3
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 1.1e-26 124.4 130 59.2
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 1.4e-26 124.0 129 55.8
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 1.8e-26 123.6 139 53.2
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 2.4e-26 123.2 132 57.6
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 2.4e-26 123.2 132 54.5
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 3.1e-26 122.9 131 58.8
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 4.1e-26 122.5 132 56.8
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 4.1e-26 122.5 141 51.1
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 5.3e-26 122.1 130 57.7
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 7.0e-26 121.7 130 59.2
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 1.2e-25 120.9 132 56.8
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.6e-25 120.6 130 56.9
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 1.6e-25 120.6 127 70.9
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 3.5e-25 119.4 130 56.2
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 4.5e-25 119.0 130 53.1
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 5.9e-25 118.6 131 57.3
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 1.3e-24 117.5 135 57.8
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 1.3e-24 117.5 134 53.7
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 1.7e-24 117.1 130 61.5
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 2.2e-24 116.7 133 55.6
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 2.2e-24 116.7 130 63.8
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 2.2e-24 116.7 130 51.5
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 2.9e-24 116.3 130 53.1
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 3.8e-24 115.9 130 58.5
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 5.0e-24 115.5 133 54.1
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 5.0e-24 115.5 128 55.5
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 6.5e-24 115.2 136 64.7
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 6.5e-24 115.2 133 54.1
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 8.5e-24 114.8 130 50.8
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 8.5e-24 114.8 130 53.8
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 8.5e-24 114.8 131 67.2
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 8.5e-24 114.8 129 55.8
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 8.5e-24 114.8 130 63.8
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 1.1e-23 114.4 130 57.7
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.9e-23 113.6 130 58.5
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 1.9e-23 113.6 129 51.9
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 3.2e-23 112.8 130 53.8
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 4.2e-23 112.5 130 51.5
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 5.5e-23 112.1 136 55.9
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 7.2e-23 111.7 133 54.1
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 1.6e-22 110.5 130 53.1
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 1.6e-22 110.5 130 56.2
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 2.7e-22 109.8 137 49.6
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 2.7e-22 109.8 131 64.9
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 2.7e-22 109.8 131 59.5
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 3.6e-22 109.4 132 53.8
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 3.6e-22 109.4 130 51.5
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 6.1e-22 108.6 132 55.3
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 6.1e-22 108.6 132 55.3
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 1.0e-21 107.8 126 51.6
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 1.0e-21 107.8 131 57.3
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 1.0e-21 107.8 130 50.8
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 1.0e-21 107.8 141 48.9
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 1.4e-21 107.5 130 53.8
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 1.4e-21 107.5 127 50.4
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 1.4e-21 107.5 130 50.8
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 1.8e-21 107.1 132 62.1
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 3.0e-21 106.3 130 60.8
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 4.0e-21 105.9 127 52.0
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 8.8e-21 104.8 134 52.2
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 1.2e-20 104.4 130 50.8
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 1.2e-20 104.4 133 53.4
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 2.0e-20 103.6 130 53.8
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 2.0e-20 103.6 130 53.8
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 2.0e-20 103.6 131 63.4
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 2.6e-20 103.2 132 55.3
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 2.6e-20 103.2 132 55.3
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 2.6e-20 103.2 133 54.1
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 2.6e-20 103.2 130 53.8
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 4.4e-20 102.4 130 53.8
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 5.7e-20 102.1 154 55.8
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 7.5e-20 101.7 135 52.6
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 9.8e-20 101.3 130 53.1
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 3.7e-19 99.4 130 51.5
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 4.8e-19 99.0 133 57.9
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 8.3e-19 98.2 130 50.8
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 4.5e-17 92.4 135 51.9
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 3.8e-16 89.4 128 41.4
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 5.0e-16 89.0 128 41.4
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 2.5e-15 86.7 123 48.8
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 8.0e-14 81.6 153 40.5
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 2.3e-13 80.1 133 40.6
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 5.7e-12 75.5 57 68.4
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 1.7e-11 73.9 65 58.5
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 6.3e-11 72.0 131 44.3
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 4.1e-10 69.3 140 36.4
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 2.7e-09 66.6 48 68.8
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 5.9e-09 65.5 62 54.8
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 1.3e-08 64.3 43 69.8
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 1.3e-08 64.3 115 40.9


User provided reference genes

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