Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020158 Camellia sinensis var. sinensis HOM05D005357 ORTHO05D006354 1.7e-213 745.7 380 100.0
Actinidia29139 Actinidia chinensis HOM05D005357 ORTHO05D006354 4.6e-126 455.3 391 65.5
Actinidia13789 Actinidia chinensis HOM05D005357 ORTHO05D006354 6.7e-125 451.4 392 64.3
Dinv37091 Davidia involucrata HOM05D005357 ORTHO05D006354 8.7e-125 451.1 390 68.7
CiPaw.09G205000 Carya illinoinensis HOM05D005357 ORTHO05D006354 1.5e-124 450.3 390 65.4
QL07p036221 Quercus lobata HOM05D005357 ORTHO05D006354 9.6e-124 447.6 389 65.0
Cfa017262 Carpinus fangiana HOM05D005357 ORTHO05D006354 1.0e-120 437.6 392 65.8
Hma1.2p1_0703F.1_g206335 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 6.5e-120 434.9 390 62.6
Haze_20938 Corylus avellana HOM05D005357 ORTHO05D006354 4.8e-115 418.7 391 62.7
Dinv03649 Davidia involucrata HOM05D005357 ORTHO05D006354 1.5e-113 413.7 392 62.8
TAR633G0560 Trochodendron aralioides HOM05D005357 ORTHO05D006354 1.9e-111 406.8 406 61.6
Potri.006G095600 Populus trichocarpa HOM05D005357 ORTHO05D006354 1.1e-108 397.5 391 58.3
TWI77G0073 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 1.5e-108 397.1 389 59.6
Sabra06G0073400 Salix brachista HOM05D005357 ORTHO05D006354 2.5e-108 396.4 391 58.6
Nitab4.5_0006254g0010 Nicotiana tabacum HOM05D005357 ORTHO05D006354 1.3e-107 394.0 390 58.2
Peaxi162Scf00141g00133 Petunia axillaris HOM05D005357 ORTHO05D006354 1.5e-105 387.1 390 56.9
Nn1g02852 Nelumbo nucifera HOM05D005357 ORTHO05D006354 7.7e-105 384.8 405 57.0
Thecc.05G023500 Theobroma cacao HOM05D005357 ORTHO05D006354 1.3e-104 384.0 390 57.4
Duzib093G0024 Durio zibethinus HOM05D005357 ORTHO05D006354 2.9e-104 382.9 389 57.6
COL.COLO4_14619 Corchorus olitorius HOM05D005357 ORTHO05D006354 8.5e-104 381.3 390 57.2
CANSAT35G1827 Cannabis sativa HOM05D005357 ORTHO05D006354 5.5e-103 378.6 389 57.3
Prupe.6G269500 Prunus persica HOM05D005357 ORTHO05D006354 1.2e-102 377.5 373 60.1
Cc06_g01760 Coffea canephora HOM05D005357 ORTHO05D006354 1.4e-101 374.0 392 58.7
Ciclev10011563m.g Citrus clementina HOM05D005357 ORTHO05D006354 6.7e-101 371.7 391 57.8
Eucgr.B02762 Eucalyptus grandis HOM05D005357 ORTHO05D006354 3.7e-99 365.9 391 56.3
Atru.chr8.2135 Acer truncatum HOM05D005357 ORTHO05D006354 1.4e-98 364.0 391 56.8
Manes.08G086900 Manihot esculenta HOM05D005357 ORTHO05D006354 2.4e-98 363.2 392 55.9
CAN.G284.13 Capsicum annuum HOM05D005357 ORTHO05D006354 2.0e-97 360.1 390 54.1
MD04G1145200 Malus domestica HOM05D005357 ORTHO05D006354 2.0e-97 360.1 367 58.3
Cpa.g.sc312.3 Carica papaya HOM05D005357 ORTHO05D006354 1.7e-96 357.1 387 56.3
TAR636G3085 Trochodendron aralioides HOM05D005357 ORTHO05D006354 2.9e-96 356.3 373 60.1
FvH4_6g12190 Fragaria vesca HOM05D005357 ORTHO05D006354 1.1e-95 354.4 374 56.4
FAN09G0023 Fragaria x ananassa HOM05D005357 ORTHO05D006354 1.1e-95 354.4 374 56.4
FAN14G1666 Fragaria x ananassa HOM05D005357 ORTHO05D006354 1.1e-95 354.4 374 56.4
Duzib106G1773 Durio zibethinus HOM05D005357 ORTHO05D006354 1.9e-95 353.6 389 55.3
Nitab4.5_0000008g0560 Nicotiana tabacum HOM05D005357 ORTHO05D006354 2.5e-95 353.2 390 54.1
FAN14G2781 Fragaria x ananassa HOM05D005357 ORTHO05D006354 5.5e-95 352.1 374 56.1
Gohir.A09G163000 Gossypium hirsutum HOM05D005357 ORTHO05D006354 5.5e-95 352.1 389 54.8
MD12G1159000 Malus domestica HOM05D005357 ORTHO05D006354 2.1e-94 350.1 370 57.0
RcHm_v2.0_Chr3g0463991 Rosa chinensis HOM05D005357 ORTHO05D006354 4.7e-94 349.0 373 55.2
PGSC0003DMG400002411 Solanum tuberosum HOM05D005357 ORTHO05D006354 1.8e-93 347.1 392 53.3
vmacro01296 Vaccinium macrocarpon HOM05D005357 ORTHO05D006354 3.9e-93 345.9 392 55.4
FAN05G3392 Fragaria x ananassa HOM05D005357 ORTHO05D006354 4.4e-92 342.4 374 54.5
Duzib128G1243 Durio zibethinus HOM05D005357 ORTHO05D006354 1.3e-91 340.9 395 53.2
Gohir.D09G158500 Gossypium hirsutum HOM05D005357 ORTHO05D006354 4.8e-91 339.0 389 51.7
FAN02G3235 Fragaria x ananassa HOM05D005357 ORTHO05D006354 6.3e-91 338.6 346 56.9
Gorai.006G180200 Gossypium raimondii HOM05D005357 ORTHO05D006354 9.1e-90 334.7 389 53.2
ClCG10G021740 Citrullus lanatus HOM05D005357 ORTHO05D006354 1.1e-87 327.8 392 52.6
TWI74G0304 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 3.2e-87 326.2 329 57.4
MBI06_g17209_MAGBIO Magnolia biondii HOM05D005357 ORTHO05D006354 3.3e-84 316.2 409 51.6
CsaV3_3G034230 Cucumis sativus L. HOM05D005357 ORTHO05D006354 1.3e-80 304.3 392 50.8
Lj2A78G31 Lonicera japonica HOM05D005357 ORTHO05D006354 1.2e-78 297.7 392 51.0
Sed0007832 Sechium edule HOM05D005357 ORTHO05D006354 4.4e-76 289.3 305 54.8
PGR031G1436 Punica granatum HOM05D005357 ORTHO05D006354 2.4e-74 283.5 392 49.2
MELO3C009198.2 Cucumis melo HOM05D005357 ORTHO05D006354 1.5e-71 274.2 392 47.7
arahy.Tifrunner.gnm1.ann1.5ZZ6F4 Arachis hypogaea HOM05D005357 ORTHO05D006354 7.2e-71 271.9 384 47.4
Glyma.07G144300 Glycine max HOM05D005357 ORTHO05D006354 7.2e-71 271.9 385 47.3
VMungo1383G1762 Vigna mungo HOM05D005357 ORTHO05D006354 2.8e-70 270.0 385 47.5
arahy.Tifrunner.gnm1.ann1.H8VZ0K Arachis hypogaea HOM05D005357 ORTHO05D006354 1.0e-69 268.1 384 46.9
EL10As5g23477 Beta vulgaris HOM05D005357 ORTHO05D006354 1.0e-69 268.1 391 45.5
Phvul.008G108800 Phaseolus vulgaris HOM05D005357 ORTHO05D006354 1.8e-69 267.3 385 47.8
MSTRG.5603 Avicennia marina HOM05D005357 ORTHO05D006354 3.0e-69 266.5 393 47.3
PGSC0003DMG402020324 Solanum tuberosum HOM05D005357 ORTHO05D006354 1.2e-68 264.6 391 46.3
PSO384G3148 Papaver somniferum HOM05D005357 ORTHO05D006354 9.8e-68 261.5 384 45.6
Aqoxy1G00739 Aquilegia oxysepala HOM05D005357 ORTHO05D006354 1.3e-67 261.2 377 47.2
Glyma.18G195500 Glycine max HOM05D005357 ORTHO05D006354 1.8e-66 257.3 386 46.4
PSO585G0030 Papaver somniferum HOM05D005357 ORTHO05D006354 1.8e-66 257.3 383 46.5
GSVIVG01034021001 Vitis vinifera HOM05D005357 ORTHO05D006354 6.6e-64 248.8 388 41.8
AUR62024704 Chenopodium quinoa HOM05D005357 ORTHO05D006354 8.6e-64 248.4 276 54.0
AUR62011861 Chenopodium quinoa HOM05D005357 ORTHO05D006354 2.5e-63 246.9 276 53.6
Gorai.012G111100 Gossypium raimondii HOM05D005357 ORTHO05D006354 2.5e-63 246.9 265 54.3
SalBow3G4061 Salvia bowleyana HOM05D005357 ORTHO05D006354 4.3e-63 246.1 392 45.4
Sopen09g006960 Solanum pennellii HOM05D005357 ORTHO05D006354 1.6e-62 244.2 391 44.8
Solyc09g013120.4 Solanum lycopersicum HOM05D005357 ORTHO05D006354 2.1e-62 243.8 391 44.8
Lj3g0024478 Lotus japonicus HOM05D005357 ORTHO05D006354 8.0e-62 241.9 387 44.2
Gohir.A04G087700 Gossypium hirsutum HOM05D005357 ORTHO05D006354 1.0e-61 241.5 264 53.4
Medtr7g056183 Medicago truncatula HOM05D005357 ORTHO05D006354 3.1e-61 240.0 383 44.1
Medtr7g066710 Medicago truncatula HOM05D005357 ORTHO05D006354 2.6e-60 236.9 385 42.9
Gohir.D04G128100 Gossypium hirsutum HOM05D005357 ORTHO05D006354 3.4e-60 236.5 263 53.2
Migut.J00234 Erythranthe guttata HOM05D005357 ORTHO05D006354 7.5e-60 235.3 384 43.8
Ah.11g049570 Amaranthus hybridus HOM05D005357 ORTHO05D006354 1.3e-59 234.6 392 44.1
Lalb_Chr01g0022881 Lupinus albus HOM05D005357 ORTHO05D006354 2.4e-58 230.3 388 44.6
Psat3g131000 Pisum sativum HOM05D005357 ORTHO05D006354 2.4e-58 230.3 386 43.8
DCAR_005589 Daucus carota HOM05D005357 ORTHO05D006354 4.1e-58 229.6 390 43.6
HPP92_021066 Vanilla planifolia HOM05D005357 ORTHO05D006354 7.8e-57 225.3 400 41.5
Hma1.2p1_0125F.1_g058510 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 1.3e-56 224.6 380 40.8
Lalb_Chr03g0042941 Lupinus albus HOM05D005357 ORTHO05D006354 4.3e-55 219.5 387 40.8
Hund09607 Selenicereus undatus HOM05D005357 ORTHO05D006354 1.6e-54 217.6 291 46.4
Ca_09168_v3 Cicer arietinum L. HOM05D005357 ORTHO05D006354 2.3e-53 213.8 387 43.2
TPR.G1557 Trifolium pratense HOM05D005357 ORTHO05D006354 1.2e-52 211.5 279 47.7
Oeu030537.4 Olea europaea HOM05D005357 ORTHO05D006354 8.3e-51 205.3 342 42.7
SGA_v2.0_scaffold85G26772 Striga asiatica HOM05D005357 ORTHO05D006354 3.3e-47 193.4 348 41.4
Hund02920 Selenicereus undatus HOM05D005357 ORTHO05D006354 1.5e-44 184.5 291 44.0
Rhsim01G0256700 Rhododendron simsii HOM05D005357 ORTHO05D004574 1.7e-43 181.0 166 60.8
Aa31LG1G22800 Aethionema arabicum HOM05D005357 ORTHO05D006354 2.2e-43 180.6 386 36.3
THA.LOC104827038 Tarenaya hassleriana HOM05D005357 ORTHO05D006354 3.7e-43 179.9 311 42.1
Os10g0494500 Oryza sativa ssp. japonica HOM05D005357 ORTHO05D006354 4.7e-38 162.9 343 37.3
Zm00001eb044800 Zea mays HOM05D005357 ORTHO05D006354 8.1e-38 162.2 351 40.2
Oeu044369.1 Olea europaea HOM05D005357 ORTHO05D006354 2.0e-36 157.5 389 33.9
SGA_v2.0_scaffold75G24995 Striga asiatica HOM05D005357 ORTHO05D006354 2.6e-36 157.1 309 36.9
HanXRQChr13g0406371 Helianthus annuus HOM05D005357 ORTHO05D006354 3.8e-35 153.3 384 34.6
Oeu055280.1 Olea europaea HOM05D005357 ORTHO05D006354 6.4e-35 152.5 268 42.9
Carub.0006s0073 Capsella rubella HOM05D005357 ORTHO05D006354 2.3e-32 144.1 262 40.1
CDE04G3126 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 3.0e-32 143.7 352 36.1
Sp6g40520 Schrenkiella parvula HOM05D005357 ORTHO05D006354 1.5e-31 141.4 275 39.3
Sc05g0000650 Simmondsia chinensis HOM05D005357 ORTHO05D006354 3.3e-31 140.2 209 45.5
ATR0605G041 Amborella trichopoda HOM05D005357 ORTHO05D006354 9.6e-31 138.7 406 33.7
ECA248G2096 Erigeron canadensis HOM05D005357 ORTHO05D006354 4.8e-30 136.3 386 34.2
Glyma.18G195800 Glycine max HOM05D005357 ORTHO05D006354 5.3e-29 132.9 254 41.3
Thhalv10014073m.g Eutrema salsugineum HOM05D005357 ORTHO05D006354 1.5e-28 131.3 259 40.5
AT5G01160 Arabidopsis thaliana HOM05D005357 ORTHO05D006354 1.7e-27 127.9 265 38.9
AL6G11040 Arabidopsis lyrata HOM05D005357 ORTHO05D006354 2.9e-27 127.1 265 38.5
A10p33610 Brassica napus HOM05D005357 ORTHO05D006354 2.9e-27 127.1 270 39.3
CARHR211480 Cardamine hirsuta HOM05D005357 ORTHO05D006354 6.4e-27 125.9 263 37.6
C09p74540 Brassica napus HOM05D005357 ORTHO05D006354 7.8e-25 119.0 286 37.1
BolC9t60186H Brassica oleracea HOM05D005357 ORTHO05D006354 1.0e-24 118.6 286 37.1
BcaNung02762 Brassica carinata HOM05D005357 ORTHO05D006354 8.7e-24 115.5 293 35.2
BcaB05g21942 Brassica carinata HOM05D005357 ORTHO05D006354 1.5e-23 114.8 278 37.4
BraA10t45393Z Brassica rapa HOM05D005357 ORTHO05D006354 1.5e-23 114.8 269 37.2
CDE03G0086 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 2.8e-22 110.5 354 32.5
SHI12776 Sapria himalayana HOM05D005357 ORTHO05D006354 1.5e-20 104.8 352 32.7
Zm00001eb221140 Zea mays HOM05D005357 ORTHO05D006354 5.4e-18 96.3 141 46.1
Lsat_1_v5_gn_5_155380 Lactuca sativa HOM05D005357 ORTHO05D006354 7.9e-17 92.4 384 31.5
BcaNung02766 Brassica carinata HOM05D005357 ORTHO05D006354 5.1e-16 89.7 281 34.2
unitig_22.g6590 Utricularia gibba HOM05D005357 ORTHO05D006354 2.5e-15 87.4 393 29.5
HanXRQChr13g0397571 Helianthus annuus HOM05D005357 ORTHO05D006354 1.1e-13 82.0 309 31.7
Sopen01g013720 Solanum pennellii HOM05D005357 ORTHO05D006354 8.4e-11 72.4 114 43.9
HanXRQChr13g0397921 Helianthus annuus HOM05D005357 ORTHO05D006354 3.2e-10 70.5 131 40.5
DCAR_008325 Daucus carota HOM05D005357 ORTHO05D006354 4.6e-09 66.6 137 36.5
SEGI_08495 Sequoiadendron giganteum HOM05D054687 ORTHO05D006354 2.5e-07 60.8 345 26.1
Oeu020881.1 Olea europaea HOM05D005357 ORTHO05D006354 5.7e-07 59.7 81 51.9
SEGI_31043 Sequoiadendron giganteum HOM05D005357 ORTHO05D006354 3.7e-06 57.0 43 55.8


User provided reference genes

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