Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020153 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 2.8e-91 338.6 171 100.0
CSS0019957 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 2.1e-46 189.5 96 94.8
Ciclev10009277m.g Citrus clementina HOM05D005859 ORTHO05D007576 2.6e-44 182.6 96 91.7
Atru.chr7.2673 Acer truncatum HOM05D005859 ORTHO05D007576 7.6e-44 181.0 96 90.6
CSS0022235 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.3e-43 180.3 96 89.6
Actinidia22411 Actinidia chinensis HOM05D005859 ORTHO05D007576 2.9e-43 179.1 96 88.5
Nn2g12765 Nelumbo nucifera HOM05D005859 ORTHO05D007576 4.9e-43 178.3 96 87.5
Rhsim05G0088100 Rhododendron simsii HOM05D005859 ORTHO05D007576 4.9e-43 178.3 96 87.5
THA.LOC104814931 Tarenaya hassleriana HOM05D005859 ORTHO05D007576 4.9e-43 178.3 114 78.9
TWI63G1176 Tripterygium wilfordii HOM05D005859 ORTHO05D007576 4.9e-43 178.3 100 85.0
CSS0002423 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 6.4e-43 177.9 96 90.6
CSS0037116 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 6.4e-43 177.9 96 90.6
Rhsim02G0125100 Rhododendron simsii HOM05D005859 ORTHO05D007576 6.4e-43 177.9 96 87.5
CANSAT64G2965 Cannabis sativa HOM05D005859 ORTHO05D007576 1.4e-42 176.8 96 87.5
Cfa013324 Carpinus fangiana HOM05D005859 ORTHO05D007576 2.4e-42 176.0 100 85.0
Haze_21816 Corylus avellana HOM05D005859 ORTHO05D007576 2.4e-42 176.0 96 87.5
QL12p026076 Quercus lobata HOM05D005859 ORTHO05D007576 2.4e-42 176.0 96 87.5
Dinv07263 Davidia involucrata HOM05D005859 ORTHO05D007576 3.2e-42 175.6 96 88.5
Duzib151G0554 Durio zibethinus HOM05D005859 ORTHO05D007576 3.2e-42 175.6 96 86.5
Eucgr.A02021 Eucalyptus grandis HOM05D005859 ORTHO05D007576 3.2e-42 175.6 96 86.5
Manes.08G049200 Manihot esculenta HOM05D005859 ORTHO05D007576 3.2e-42 175.6 100 84.0
CiPaw.07G208600 Carya illinoinensis HOM05D005859 ORTHO05D007576 4.2e-42 175.3 96 86.5
COL.COLO4_34684 Corchorus olitorius HOM05D005859 ORTHO05D007576 7.1e-42 174.5 96 86.5
VMungo1309G0784 Vigna mungo HOM05D005859 ORTHO05D007576 7.1e-42 174.5 96 88.5
PGR042G0112 Punica granatum HOM05D005859 ORTHO05D007576 9.3e-42 174.1 100 83.0
Thecc.04G293600 Theobroma cacao HOM05D005859 ORTHO05D007576 9.3e-42 174.1 96 87.5
Duzib151G0446 Durio zibethinus HOM05D005859 ORTHO05D007576 1.2e-41 173.7 96 85.4
Phvul.009G104500 Phaseolus vulgaris HOM05D005859 ORTHO05D007576 1.2e-41 173.7 96 87.5
Sc10g0009100 Simmondsia chinensis HOM05D005859 ORTHO05D007576 1.2e-41 173.7 96 86.5
Potri.018G003900 Populus trichocarpa HOM05D005859 ORTHO05D007576 1.6e-41 173.3 96 85.4
TAR625G0738 Trochodendron aralioides HOM05D005859 ORTHO05D007576 1.6e-41 173.3 96 85.4
CAN.G149.19 Capsicum annuum HOM05D005859 ORTHO05D007576 2.1e-41 172.9 98 84.7
Potri.006G277100 Populus trichocarpa HOM05D005859 ORTHO05D007576 2.1e-41 172.9 96 85.4
Solyc02g068650.2 Solanum lycopersicum HOM05D005859 ORTHO05D007576 2.1e-41 172.9 98 86.7
Sopen02g017820 Solanum pennellii HOM05D005859 ORTHO05D007576 2.1e-41 172.9 98 86.7
Lalb_Chr11g0064301 Lupinus albus HOM05D005859 ORTHO05D007576 2.7e-41 172.6 96 86.5
Sabra06G0214800 Salix brachista HOM05D005859 ORTHO05D007576 2.7e-41 172.6 96 85.4
ClCG08G012440 Citrullus lanatus HOM05D005859 ORTHO05D007576 3.5e-41 172.2 96 86.5
MELO3C011163.2 Cucumis melo HOM05D005859 ORTHO05D007576 3.5e-41 172.2 96 86.5
Sabra18G0001700 Salix brachista HOM05D005859 ORTHO05D007576 3.5e-41 172.2 96 84.4
Sabra18G0009500 Salix brachista HOM05D005859 ORTHO05D007576 3.5e-41 172.2 96 84.4
Cpa.g.sc10.203 Carica papaya HOM05D005859 ORTHO05D007576 4.6e-41 171.8 96 86.5
Prupe.1G454800 Prunus persica HOM05D005859 ORTHO05D007576 6.0e-41 171.4 96 85.4
CsaV3_2G031130 Cucumis sativus L. HOM05D005859 ORTHO05D007576 7.8e-41 171.0 96 86.5
DCAR_010833 Daucus carota HOM05D005859 ORTHO05D007576 7.8e-41 171.0 96 84.4
Glyma.04G078700 Glycine max HOM05D005859 ORTHO05D007576 7.8e-41 171.0 96 86.5
CSS0012487 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.0e-40 170.6 92 92.4
PGSC0003DMG400010428 Solanum tuberosum HOM05D005859 ORTHO05D007576 1.3e-40 170.2 96 86.5
Lj1g0020437 Lotus japonicus HOM05D005859 ORTHO05D007576 1.7e-40 169.9 96 85.4
Sed0013908 Sechium edule HOM05D005859 ORTHO05D007576 1.7e-40 169.9 96 85.4
HanXRQChr07g0193381 Helianthus annuus HOM05D005859 ORTHO05D007576 2.3e-40 169.5 96 84.4
Lsat_1_v5_gn_5_41801 Lactuca sativa HOM05D005859 ORTHO05D007576 2.3e-40 169.5 117 72.6
Aqoxy7G02813 Aquilegia oxysepala HOM05D005859 ORTHO05D007576 3.0e-40 169.1 96 84.4
Gohir.A09G063900 Gossypium hirsutum HOM05D005859 ORTHO05D007576 3.0e-40 169.1 96 83.3
Gohir.D09G062800 Gossypium hirsutum HOM05D005859 ORTHO05D007576 3.0e-40 169.1 97 83.5
Gorai.006G077600 Gossypium raimondii HOM05D005859 ORTHO05D007576 3.0e-40 169.1 97 83.5
Psat5g022960 Pisum sativum HOM05D005859 ORTHO05D007576 3.0e-40 169.1 96 84.4
Ca_15630_v3 Cicer arietinum L. HOM05D005859 ORTHO05D007576 3.9e-40 168.7 114 72.8
Glyma.06G080300 Glycine max HOM05D005859 ORTHO05D007576 3.9e-40 168.7 96 86.5
Carub.0006s2269 Capsella rubella HOM05D005859 ORTHO05D007576 5.1e-40 168.3 96 84.4
AUR62007184 Chenopodium quinoa HOM05D005859 ORTHO05D007576 5.1e-40 168.3 96 84.4
Ah.07g199340 Amaranthus hybridus HOM05D005859 ORTHO05D007576 6.6e-40 167.9 96 85.4
AL6G36490 Arabidopsis lyrata HOM05D005859 ORTHO05D007576 6.6e-40 167.9 96 84.4
RcHm_v2.0_Chr6g0305541 Rosa chinensis HOM05D005859 ORTHO05D007576 6.6e-40 167.9 96 83.3
Aa31LG11G4050 Aethionema arabicum HOM05D005859 ORTHO05D007576 8.7e-40 167.5 96 84.4
Migut.A01131 Erythranthe guttata HOM05D005859 ORTHO05D007576 8.7e-40 167.5 96 83.3
Sed0022456 Sechium edule HOM05D005859 ORTHO05D007576 8.7e-40 167.5 96 83.3
MSTRG.12122 Avicennia marina HOM05D005859 ORTHO05D007576 1.1e-39 167.2 96 82.3
FvH4_2g36340 Fragaria vesca HOM05D005859 ORTHO05D007576 1.1e-39 167.2 96 83.3
FAN15G0047 Fragaria x ananassa HOM05D005859 ORTHO05D007576 1.1e-39 167.2 96 83.3
HanXRQChr09g0275211 Helianthus annuus HOM05D005859 ORTHO05D007576 1.1e-39 167.2 96 82.3
Nitab4.5_0006282g0050 Nicotiana tabacum HOM05D005859 ORTHO05D007576 1.1e-39 167.2 98 83.7
EL10Ac5g12246 Beta vulgaris HOM05D005859 ORTHO05D007576 1.5e-39 166.8 95 85.3
MD08G1121000 Malus domestica HOM05D005859 ORTHO05D007576 1.5e-39 166.8 95 84.2
FAN20G1422 Fragaria x ananassa HOM05D005859 ORTHO05D007576 1.9e-39 166.4 96 82.3
Nitab4.5_0003379g0070 Nicotiana tabacum HOM05D005859 ORTHO05D007576 1.9e-39 166.4 98 82.7
AT5G24840 Arabidopsis thaliana HOM05D005859 ORTHO05D007576 3.3e-39 165.6 96 83.3
CARHR188610 Cardamine hirsuta HOM05D005859 ORTHO05D007576 3.3e-39 165.6 96 82.3
Lj2P347T15 Lonicera japonica HOM05D005859 ORTHO05D007576 4.3e-39 165.2 96 83.3
MBI07_g41262_MAGBIO Magnolia biondii HOM05D005859 ORTHO05D007576 4.3e-39 165.2 96 80.2
Medtr3g109360 Medicago truncatula HOM05D005859 ORTHO05D007576 4.3e-39 165.2 96 82.3
TPR.G1368 Trifolium pratense HOM05D005859 ORTHO05D007576 4.3e-39 165.2 96 82.3
Thhalv10004821m.g Eutrema salsugineum HOM05D005859 ORTHO05D007576 7.3e-39 164.5 96 80.2
SGA_v2.0_scaffold104G30176 Striga asiatica HOM05D005859 ORTHO05D007576 7.3e-39 164.5 96 80.2
Cc09_g05860 Coffea canephora HOM05D005859 ORTHO05D007576 9.6e-39 164.1 95 82.1
MD15G1100000 Malus domestica HOM05D005859 ORTHO05D007576 9.6e-39 164.1 106 76.4
Oeu056039.1 Olea europaea HOM05D005859 ORTHO05D007576 1.6e-38 163.3 96 82.3
BolC9t53628H Brassica oleracea HOM05D005859 ORTHO05D007576 2.1e-38 162.9 96 79.2
CSS0049229 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 2.8e-38 162.5 91 86.8
ECA238G0328 Erigeron canadensis HOM05D005859 ORTHO05D007576 3.6e-38 162.2 96 81.2
HPP92_010538 Vanilla planifolia HOM05D005859 ORTHO05D007576 3.6e-38 162.2 96 79.2
HPP92_010546 Vanilla planifolia HOM05D005859 ORTHO05D007576 3.6e-38 162.2 96 79.2
BolC7t44822H Brassica oleracea HOM05D005859 ORTHO05D008158 4.8e-38 161.8 96 80.2
SalBow1G3786 Salvia bowleyana HOM05D005859 ORTHO05D007576 4.8e-38 161.8 96 81.2
BcaB04g19801 Brassica carinata HOM05D005859 ORTHO05D007576 6.2e-38 161.4 96 80.2
C07p42930 Brassica napus HOM05D005859 ORTHO05D008158 6.2e-38 161.4 96 80.2
PSO063G7086 Papaver somniferum HOM05D005859 ORTHO05D007576 6.2e-38 161.4 96 81.2
A06p35610 Brassica napus HOM05D005859 ORTHO05D007576 8.1e-38 161.0 96 80.2
Sp2g22610 Schrenkiella parvula HOM05D005859 ORTHO05D007576 1.1e-37 160.6 96 80.2
BcaC04g23549 Brassica carinata HOM05D005859 ORTHO05D007576 1.4e-37 160.2 96 79.2
unitig_21.g20313 Utricularia gibba HOM05D005859 ORTHO05D007576 5.3e-37 158.3 142 56.3
Zm00001eb208790 Zea mays HOM05D005859 ORTHO05D007576 5.3e-37 158.3 101 73.3
HPP92_010527 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.2e-36 157.1 93 78.5
HPP92_010638 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.5e-36 156.8 95 77.9
AUR62018819 Chenopodium quinoa HOM05D005859 ORTHO05D007576 2.0e-36 156.4 97 78.4
CSS0043283 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 4.9e-35 151.8 117 65.8
SEGI_16955 Sequoiadendron giganteum HOM05D005859 ORTHO05D007576 2.4e-34 149.4 96 71.9
ATR0697G154 Amborella trichopoda HOM05D005859 ORTHO05D007576 1.2e-33 147.1 112 63.4
Mapoly0026s0057 Marchantia polymorpha HOM05D005859 ORTHO05D007576 1.3e-32 143.7 96 68.8
Pp3c24_9600 Physcomitrium patens HOM05D005859 ORTHO05D007576 1.9e-31 139.8 96 67.7
Peaxi162Scf00149g00014 Petunia axillaris HOM05D005859 ORTHO05D007576 2.5e-31 139.4 94 72.3
Os06g0236900 Oryza sativa ssp. japonica HOM05D005859 ORTHO05D007576 3.3e-31 139.0 83 78.3
CSS0005155 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 2.8e-30 136.0 150 52.7
AagrBONN_evm.TU.Sc2ySwM_344.1368 Anthoceros agrestis HOM05D005859 ORTHO05D007576 1.4e-29 133.7 96 66.7
SMO358G0125 Selaginella moellendorffii HOM05D005859 ORTHO05D007576 2.0e-28 129.8 96 62.5
CBR_g63067 Chara braunii HOM05D005859 ORTHO05D007576 5.8e-28 128.3 99 60.6
PRCOL_00003713 Prasinoderma coloniale HOM05D005859 ORTHO05D007576 1.9e-26 123.2 106 55.7
Cre07.g314550 Chlamydomonas reinhardtii HOM05D005859 ORTHO05D007576 1.6e-25 120.2 96 57.3
MCO01G481 Micromonas commoda HOM05D005859 ORTHO05D007576 3.3e-23 112.5 96 56.2
CSS0033509 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 4.2e-18 95.5 49 87.8
Haze_26141 Corylus avellana HOM05D005859 ORTHO05D007576 2.1e-17 93.2 96 43.8
GSVIVG01035552001 Vitis vinifera HOM05D005859 ORTHO05D007576 1.1e-15 87.4 91 56.0
A09p06400 Brassica napus HOM05D005859 ORTHO05D007576 4.1e-13 79.0 57 66.7
HPP92_010586 Vanilla planifolia HOM05D005859 ORTHO05D007576 5.3e-13 78.6 49 75.5
ATR1096G015 Amborella trichopoda HOM05D005859 ORTHO05D007576 1.2e-12 77.4 54 61.1
HanXRQChr14g0440281 Helianthus annuus HOM05D005859 ORTHO05D007576 1.0e-11 74.3 42 81.0
HPP92_010585 Vanilla planifolia HOM05D005859 ORTHO05D007576 2.2e-11 73.2 40 85.0
CDE05G2856 Ceratophyllum demersum HOM05D005859 ORTHO05D007576 1.9e-10 70.1 36 86.1
Dinv07265 Davidia involucrata HOM05D005859 ORTHO05D007576 4.6e-09 65.5 37 83.8
HPP92_010304 Vanilla planifolia HOM05D005859 ORTHO05D007576 6.3e-06 55.1 63 44.4


User provided reference genes

Program Settings