Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020144 Camellia sinensis var. sinensis HOM05D028518 ORTHO05D013819 9.6e-208 726.5 341 100.0
CSS0042303 Camellia sinensis var. sinensis HOM05D028518 ORTHO05D013819 2.4e-182 642.1 354 87.6
CSS0014054 Camellia sinensis var. sinensis HOM05D028518 ORTHO05D013819 3.8e-95 352.4 343 56.6
CSS0028420 Camellia sinensis var. sinensis HOM05D028518 ORTHO05D013819 3.3e-91 339.3 342 55.8
Dinv01717 Davidia involucrata HOM05D011324 ORTHO05D013448 1.2e-27 128.3 363 28.9
Dinv28167 Davidia involucrata HOM05D011324 ORTHO05D013448 1.2e-27 128.3 363 29.2
Dinv28170 Davidia involucrata HOM05D011324 ORTHO05D013448 1.2e-27 128.3 362 29.0
Dinv28164 Davidia involucrata HOM05D011324 ORTHO05D013448 3.4e-27 126.7 364 30.2
vmacro07913 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 9.8e-27 125.2 343 30.3
Dinv28165 Davidia involucrata HOM05D011324 ORTHO05D013448 2.9e-26 123.6 363 29.8
vmacro07414 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 1.4e-25 121.3 352 30.1
vmacro07415 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 1.4e-25 121.3 352 30.1
vmacro22790 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 5.4e-25 119.4 345 30.1
vmacro23393 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 5.4e-25 119.4 345 30.1
vmacro23394 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 7.0e-25 119.0 343 30.0
Rhsim09G0114300 Rhododendron simsii HOM05D012919 ORTHO05D013819 1.0e-23 115.2 389 29.0
Rhsim01G0004100 Rhododendron simsii HOM05D012919 ORTHO05D013819 5.0e-23 112.8 258 31.8
Dinv25052 Davidia involucrata HOM05D011324 ORTHO05D013448 7.3e-22 109.0 316 29.4
Dinv28172 Davidia involucrata HOM05D011324 ORTHO05D013448 1.2e-21 108.2 356 27.5
Rhsim03G0269100 Rhododendron simsii HOM05D012919 ORTHO05D013819 1.6e-21 107.8 307 30.3
Rhsim11G0078200 Rhododendron simsii HOM05D012919 ORTHO05D013819 2.1e-21 107.5 338 30.2
Dinv25049 Davidia involucrata HOM05D011324 ORTHO05D013448 7.5e-19 99.0 179 36.3
Dinv28162 Davidia involucrata HOM05D011324 ORTHO05D013448 1.7e-18 97.8 197 35.5
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 7.1e-17 92.4 181 33.7
Dinv28168 Davidia involucrata HOM05D011324 ORTHO05D013448 4.6e-16 89.7 244 30.7
Thecc.07G157200 Theobroma cacao HOM05D009781 ORTHO05D011819 7.8e-16 89.0 222 30.2
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 1.0e-15 88.6 220 29.5
Gohir.D06G037800 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.2e-13 81.6 173 33.5
Gohir.D08G028000 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.6e-13 80.1 172 32.0
Gohir.D06G038600 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.4e-12 78.2 169 30.2
Gohir.A11G324800 Gossypium hirsutum HOM05D009781 ORTHO05D011819 2.3e-12 77.4 176 31.8
Gohir.D06G036500 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.1e-12 77.0 170 30.6
Gorai.010G040800 Gossypium raimondii HOM05D009781 ORTHO05D011819 3.1e-12 77.0 170 30.6
Gorai.010G041400 Gossypium raimondii HOM05D009781 ORTHO05D011819 5.2e-12 76.3 172 32.6
Gorai.002G247600 Gossypium raimondii HOM05D009781 ORTHO05D011819 6.8e-12 75.9 172 32.0
Gohir.D06G038800 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.2e-11 75.1 169 29.0
Gohir.D06G036900 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.5e-11 74.7 172 32.0
CSS0013471 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 3.4e-11 73.6 211 29.4
Carub.0007s3639 Capsella rubella HOM05D000249 ORTHO05D000206 3.4e-11 73.6 287 25.4
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.4e-11 73.6 194 27.3
CSS0028906 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 4.4e-11 73.2 211 28.9
SGA_v2.0_scaffold130G34356 Striga asiatica HOM05D017380 ORTHO05D019049 7.6e-11 72.4 159 34.6
Gohir.A06G038600 Gossypium hirsutum HOM05D009781 ORTHO05D011819 2.2e-10 70.9 181 29.3
Gohir.A06G038813 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.8e-10 70.1 163 33.7
Gohir.D06G028300 Gossypium hirsutum HOM05D009781 ORTHO05D011819 4.9e-10 69.7 157 31.8
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 1.4e-09 68.2 146 30.8
Gohir.A06G044600 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.4e-09 68.2 176 29.5
Gorai.010G041700 Gossypium raimondii HOM05D009781 ORTHO05D011819 1.4e-09 68.2 147 36.1
Gohir.D06G026000 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.2e-09 67.0 199 29.1
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 9.2e-09 65.5 126 37.3
Carub.0007s1119 Capsella rubella HOM05D000249 ORTHO05D000206 1.6e-08 64.7 189 28.0
COL.COLO4_31291 Corchorus olitorius HOM05D017380 ORTHO05D019049 1.6e-08 64.7 301 24.3
Thhalv10025408m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.6e-08 64.7 174 29.9
Gohir.D06G025700 Gossypium hirsutum HOM05D009781 ORTHO05D011819 2.1e-08 64.3 199 27.6
Rhsim10G0150200 Rhododendron simsii HOM05D000249 ORTHO05D000206 2.1e-08 64.3 208 27.4
CSS0044023 Camellia sinensis var. sinensis HOM05D013671 ORTHO05D012833 2.7e-08 63.9 181 28.7
Actinidia16043 Actinidia chinensis HOM05D000249 ORTHO05D000206 1.3e-07 61.6 233 26.2
Carub.0007s3641 Capsella rubella HOM05D000249 ORTHO05D000206 1.3e-07 61.6 202 27.2
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 2.3e-07 60.8 126 33.3
Gohir.A06G038742 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.0e-07 60.5 174 27.6
CSS0032867 Camellia sinensis var. sinensis HOM05D013671 ORTHO05D012833 3.9e-07 60.1 181 28.7
Gohir.D06G027100 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.9e-07 60.1 199 27.6
Aqoxy3G04200 Aquilegia oxysepala HOM05D010066 ORTHO05D011146 5.1e-07 59.7 117 31.6
Carub.0005s1276 Capsella rubella HOM05D000249 ORTHO05D000206 6.6e-07 59.3 149 32.9
CARHR247160 Cardamine hirsuta HOM05D000249 ORTHO05D000206 6.6e-07 59.3 127 37.0
COL.COLO4_22990 Corchorus olitorius HOM05D017380 ORTHO05D019049 2.5e-06 57.4 69 40.6
Rhsim10G0134800 Rhododendron simsii HOM05D005276 ORTHO05D339721 3.3e-06 57.0 84 40.5
CSS0027586 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 7.3e-06 55.8 178 28.7
CSS0032255 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 7.3e-06 55.8 178 28.7


User provided reference genes

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