Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020116 Camellia sinensis var. sinensis HOM05D000961 ORTHO05D000841 1.8e-108 396.0 201 100.0
Dinv24447 Davidia involucrata HOM05D000961 ORTHO05D000841 2.9e-63 245.7 165 76.4
Rhsim05G0127100 Rhododendron simsii HOM05D000961 ORTHO05D000841 3.4e-59 232.3 157 76.4
Dinv30896 Davidia involucrata HOM05D000961 ORTHO05D000841 2.2e-58 229.6 157 75.2
TAR633G1496 Trochodendron aralioides HOM05D000961 ORTHO05D000841 9.2e-57 224.2 157 72.0
QL03p013767 Quercus lobata HOM05D000961 ORTHO05D000841 7.8e-56 221.1 157 69.4
QL03p008646 Quercus lobata HOM05D000961 ORTHO05D000841 1.3e-55 220.3 157 68.8
CiPaw.08G155300 Carya illinoinensis HOM05D000961 ORTHO05D000841 2.3e-55 219.5 157 69.4
Ciclev10000144m.g Citrus clementina HOM05D000961 ORTHO05D000841 2.9e-55 219.2 157 68.8
Thecc.05G323300 Theobroma cacao HOM05D000961 ORTHO05D000841 2.9e-55 219.2 156 69.2
GSVIVG01031243001 Vitis vinifera HOM05D000961 ORTHO05D000841 2.5e-54 216.1 157 68.8
CANSAT54G2390 Cannabis sativa HOM05D000961 ORTHO05D000841 9.5e-54 214.2 157 67.5
Duzib128G0898 Durio zibethinus HOM05D000961 ORTHO05D000841 2.8e-53 212.6 157 69.4
Haze_04059 Corylus avellana HOM05D000961 ORTHO05D000841 3.6e-53 212.2 157 70.7
Manes.09G177000 Manihot esculenta HOM05D000961 ORTHO05D000841 1.0e-52 210.7 157 65.0
COL.COLO4_05549 Corchorus olitorius HOM05D000961 ORTHO05D000841 3.1e-52 209.1 156 67.3
Gorai.007G306600 Gossypium raimondii HOM05D000961 ORTHO05D000841 4.4e-51 205.3 156 66.0
Prupe.6G312700 Prunus persica HOM05D000961 ORTHO05D000841 5.8e-51 204.9 157 66.2
Gohir.D11G283700 Gossypium hirsutum HOM05D000961 ORTHO05D000841 7.5e-51 204.5 156 66.0
Potri.013G008500 Populus trichocarpa HOM05D000961 ORTHO05D000841 9.8e-51 204.1 156 66.7
Gohir.A11G273600 Gossypium hirsutum HOM05D000961 ORTHO05D000841 1.3e-50 203.8 158 65.8
CiPaw.07G029900 Carya illinoinensis HOM05D000961 ORTHO05D000841 6.4e-50 201.4 157 65.0
MD04G1215200 Malus domestica HOM05D000961 ORTHO05D000841 2.7e-48 196.1 169 60.9
DCAR_025285 Daucus carota HOM05D000961 ORTHO05D000841 3.5e-48 195.7 162 61.7
Atru.chr2.200 Acer truncatum HOM05D000961 ORTHO05D000841 1.7e-47 193.4 160 62.5
Gohir.D13G115150 Gossypium hirsutum HOM05D000961 ORTHO05D000841 2.3e-47 193.0 156 62.8
MD12G1205600 Malus domestica HOM05D000961 ORTHO05D000841 8.6e-47 191.0 164 62.2
ClCG02G014880 Citrullus lanatus HOM05D000961 ORTHO05D000841 1.1e-46 190.7 156 60.9
FvH4_6g07470 Fragaria vesca HOM05D000961 ORTHO05D000841 2.5e-46 189.5 158 63.3
FAN14G0354 Fragaria x ananassa HOM05D000961 ORTHO05D000841 2.5e-46 189.5 158 63.3
Gorai.013G129500 Gossypium raimondii HOM05D000961 ORTHO05D000841 4.3e-46 188.7 156 62.2
MBI19_g40069_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 5.6e-46 188.3 157 61.8
Oeu064826.1 Olea europaea HOM05D000961 ORTHO05D000841 5.6e-46 188.3 159 61.6
FAN02G3224 Fragaria x ananassa HOM05D000961 ORTHO05D000841 9.5e-46 187.6 158 62.7
SalBow3G2732 Salvia bowleyana HOM05D000961 ORTHO05D000841 1.2e-45 187.2 165 60.0
Migut.N01374 Erythranthe guttata HOM05D000961 ORTHO05D000841 2.1e-45 186.4 159 59.7
CsaV3_2G007130 Cucumis sativus L. HOM05D000961 ORTHO05D000841 2.8e-45 186.0 156 58.3
Peaxi162Scf00673g00048 Petunia axillaris HOM05D000961 ORTHO05D000841 2.8e-45 186.0 159 57.2
RcHm_v2.0_Chr3g0457131 Rosa chinensis HOM05D000961 ORTHO05D000841 6.2e-45 184.9 158 60.1
Sed0012700 Sechium edule HOM05D000961 ORTHO05D000841 6.2e-45 184.9 157 58.0
FAN05G2064 Fragaria x ananassa HOM05D000961 ORTHO05D000841 1.1e-44 184.1 158 62.7
PGR031G2618 Punica granatum HOM05D000961 ORTHO05D000841 1.1e-44 184.1 157 62.4
SGA_v2.0_scaffold5G02890 Striga asiatica HOM05D000961 ORTHO05D000841 1.1e-44 184.1 159 59.1
MELO3C004180.2 Cucumis melo HOM05D000961 ORTHO05D000841 2.3e-44 183.0 156 57.7
MSTRG.27941 Avicennia marina HOM05D000961 ORTHO05D000841 5.2e-44 181.8 159 59.7
Lj5C332T3 Lonicera japonica HOM05D000961 ORTHO05D000841 8.9e-44 181.0 159 62.3
Sed0023483 Sechium edule HOM05D000961 ORTHO05D000841 2.0e-43 179.9 157 55.4
Actinidia01503 Actinidia chinensis HOM05D000961 ORTHO05D000841 3.4e-43 179.1 114 78.9
Nitab4.5_0002033g0010 Nicotiana tabacum HOM05D000961 ORTHO05D000841 4.4e-43 178.7 159 57.9
CAN.G1076.15 Capsicum annuum HOM05D000961 ORTHO05D000841 5.8e-43 178.3 159 56.6
Gohir.A13G112200 Gossypium hirsutum HOM05D000961 ORTHO05D000841 9.8e-43 177.6 156 60.9
Phvul.007G201500 Phaseolus vulgaris HOM05D000961 ORTHO05D000841 1.3e-42 177.2 157 58.6
Cc02_g35060 Coffea canephora HOM05D000961 ORTHO05D000841 2.9e-42 176.0 159 59.7
Lj5g0012800 Lotus japonicus HOM05D000961 ORTHO05D000841 2.9e-42 176.0 157 58.6
TWI12G1045 Tripterygium wilfordii HOM05D000961 ORTHO05D000841 2.9e-42 176.0 157 60.5
Nitab4.5_0000368g0030 Nicotiana tabacum HOM05D000961 ORTHO05D000841 3.7e-42 175.6 159 56.6
Lalb_Chr02g0147801 Lupinus albus HOM05D000961 ORTHO05D000841 4.9e-42 175.3 157 55.4
VMungo0720G1251 Vigna mungo HOM05D000961 ORTHO05D000841 1.1e-41 174.1 157 58.0
HanXRQChr15g0466261 Helianthus annuus HOM05D000961 ORTHO05D000841 3.2e-41 172.6 160 58.8
Psat0s3278g0080 Pisum sativum HOM05D000961 ORTHO05D000841 3.2e-41 172.6 160 57.5
Eucgr.H03293 Eucalyptus grandis HOM05D000961 ORTHO05D000841 7.0e-41 171.4 157 56.1
Lsat_1_v5_gn_7_74900 Lactuca sativa HOM05D000961 ORTHO05D000841 1.2e-40 170.6 160 58.1
Sopen01g044040 Solanum pennellii HOM05D000961 ORTHO05D000841 2.7e-40 169.5 159 54.1
TPR.G2636 Trifolium pratense HOM05D000961 ORTHO05D000841 3.5e-40 169.1 160 56.9
Ca_10174_v3 Cicer arietinum L. HOM05D000961 ORTHO05D000841 4.6e-40 168.7 160 57.5
Lalb_Chr21g0310271 Lupinus albus HOM05D000961 ORTHO05D000841 7.8e-40 167.9 157 55.4
Aqoxy5G03622 Aquilegia oxysepala HOM05D000961 ORTHO05D000841 1.3e-39 167.2 181 51.4
Glyma.10G146900 Glycine max HOM05D000961 ORTHO05D000841 1.3e-39 167.2 158 56.3
Glyma.20G097001 Glycine max HOM05D000961 ORTHO05D000841 1.7e-39 166.8 157 55.4
PSO210G6526 Papaver somniferum HOM05D000961 ORTHO05D000841 1.7e-39 166.8 159 51.6
Solyc01g100530.3 Solanum lycopersicum HOM05D000961 ORTHO05D000841 1.7e-39 166.8 159 53.5
Medtr1g084090 Medicago truncatula HOM05D000961 ORTHO05D000841 2.3e-39 166.4 160 55.6
arahy.Tifrunner.gnm1.ann1.Q6JGBF Arachis hypogaea HOM05D000961 ORTHO05D000841 3.0e-39 166.0 157 55.4
arahy.Tifrunner.gnm1.ann1.861X9K Arachis hypogaea HOM05D000961 ORTHO05D000841 5.1e-39 165.2 157 54.8
ECA236G3865 Erigeron canadensis HOM05D000961 ORTHO05D000841 4.7e-37 158.7 160 58.1
arahy.Tifrunner.gnm1.ann1.48N9T6 Arachis hypogaea HOM05D000961 ORTHO05D000841 5.2e-36 155.2 157 53.5
Nn4g25586 Nelumbo nucifera HOM05D000961 ORTHO05D000841 1.3e-34 150.6 157 52.9
THA.LOC104818746 Tarenaya hassleriana HOM05D000961 ORTHO05D000841 1.3e-34 150.6 158 48.1
arahy.Tifrunner.gnm1.ann1.N1S3JP Arachis hypogaea HOM05D000961 ORTHO05D000841 2.2e-34 149.8 157 51.6
ATR0796G155 Amborella trichopoda HOM05D000961 ORTHO05D000841 6.4e-34 148.3 157 47.8
Nn3g21707 Nelumbo nucifera HOM05D000961 ORTHO05D000841 4.1e-33 145.6 157 54.1
unitig_899.g15631 Utricularia gibba HOM05D000961 ORTHO05D000841 7.1e-33 144.8 159 50.3
Sc16g0009060 Simmondsia chinensis HOM05D000961 ORTHO05D000841 1.6e-32 143.7 157 50.3
Thhalv10003593m.g Eutrema salsugineum HOM05D000961 ORTHO05D000841 2.3e-31 139.8 157 50.3
A09p05630 Brassica napus HOM05D000961 ORTHO05D000841 5.1e-31 138.7 157 48.4
BraA09t36205Z Brassica rapa HOM05D000961 ORTHO05D000841 5.1e-31 138.7 157 48.4
Sp2g21150 Schrenkiella parvula HOM05D000961 ORTHO05D000841 5.1e-31 138.7 156 48.1
EL10Ac4g09459 Beta vulgaris HOM05D000961 ORTHO05D000841 1.1e-30 137.5 157 46.5
Hund07314 Selenicereus undatus HOM05D000961 ORTHO05D000841 1.1e-30 137.5 158 45.6
BolC9t53544H Brassica oleracea HOM05D000961 ORTHO05D000841 1.5e-30 137.1 157 48.4
AUR62000389 Chenopodium quinoa HOM05D000961 ORTHO05D000841 1.9e-30 136.7 157 45.9
MBI19_g34870_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 2.5e-30 136.3 110 63.6
BraA06t26632Z Brassica rapa HOM05D000961 ORTHO05D000841 3.3e-30 136.0 157 46.5
AUR62006744 Chenopodium quinoa HOM05D000961 ORTHO05D000841 3.3e-30 136.0 157 45.9
A06p37070 Brassica napus HOM05D000961 ORTHO05D000841 4.3e-30 135.6 157 45.9
BcaB04g19709 Brassica carinata HOM05D000961 ORTHO05D000841 5.6e-30 135.2 157 46.5
Ah.06g188190 Amaranthus hybridus HOM05D000961 ORTHO05D000841 7.3e-30 134.8 157 45.9
BcaC04g23671 Brassica carinata HOM05D000961 ORTHO05D000841 7.3e-30 134.8 157 47.8
C09p06240 Brassica napus HOM05D000961 ORTHO05D000841 7.3e-30 134.8 157 47.8
Aa31LG11G9800 Aethionema arabicum HOM05D000961 ORTHO05D000841 9.5e-30 134.4 158 45.6
AL6G38720 Arabidopsis lyrata HOM05D000961 ORTHO05D000841 9.5e-30 134.4 157 45.9
C04p14330 Brassica napus HOM05D000961 ORTHO05D000841 1.2e-29 134.0 157 45.9
BolC4t23018H Brassica oleracea HOM05D000961 ORTHO05D000841 1.2e-29 134.0 157 45.9
Ah.06g188060 Amaranthus hybridus HOM05D000961 ORTHO05D000841 1.6e-29 133.7 157 45.2
Carub.0006s2451 Capsella rubella HOM05D000961 ORTHO05D000841 2.1e-29 133.3 157 47.1
AT5G26850 Arabidopsis thaliana HOM05D000961 ORTHO05D000841 6.2e-29 131.7 157 45.9
BcaNung03669 Brassica carinata HOM05D000961 ORTHO05D000841 1.5e-27 127.1 159 46.5
CARHR186680 Cardamine hirsuta HOM05D000961 ORTHO05D000841 1.5e-27 127.1 158 45.6
BolC7t44667H Brassica oleracea HOM05D000961 ORTHO05D000841 2.6e-27 126.3 158 44.9
C07p41370 Brassica napus HOM05D000961 ORTHO05D000841 2.2e-26 123.2 158 43.7
Cpa.g.sc48.163 Carica papaya HOM05D000961 ORTHO05D000841 3.8e-26 122.5 89 67.4
Glyma.20G097102 Glycine max HOM05D000961 ORTHO05D000841 1.6e-24 117.1 103 58.3
BcaC02g11531 Brassica carinata HOM05D000961 ORTHO05D000841 6.0e-24 115.2 133 44.4
CDE12G0272 Ceratophyllum demersum HOM05D000961 ORTHO05D000841 5.1e-23 112.1 156 41.0
CDE01G0158 Ceratophyllum demersum HOM05D000961 ORTHO05D000841 7.3e-22 108.2 156 40.4
Zm00001eb014760 Zea mays HOM05D000961 ORTHO05D000841 1.4e-20 104.0 157 36.3
HPP92_005413 Vanilla planifolia HOM05D000961 ORTHO05D000841 4.9e-18 95.5 158 34.2
BcaC04g23672 Brassica carinata HOM05D000961 ORTHO05D000841 6.4e-18 95.1 101 46.5
Os03g0308200 Oryza sativa ssp. japonica HOM05D000961 ORTHO05D000841 8.4e-18 94.7 173 34.1
TPR.G18536 Trifolium pratense HOM05D000961 ORTHO05D000841 2.1e-13 80.1 66 57.6
Glyma.06G236626 Glycine max HOM05D000961 ORTHO05D000841 1.1e-09 67.8 48 66.7
Glyma.20G097400 Glycine max HOM05D000961 ORTHO05D000841 2.7e-08 63.2 43 67.4
Lsat_1_v5_gn_7_74940 Lactuca sativa HOM05D000961 ORTHO05D000841 2.7e-08 63.2 46 69.6
ATR0743G173 Amborella trichopoda HOM05D000961 ORTHO05D000841 4.3e-06 55.8 167 25.1
Migut.K00084 Erythranthe guttata HOM05D000961 ORTHO05D000841 5.6e-06 55.5 157 27.4


User provided reference genes

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