Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 2.9e-120 435.3 220 100.0
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 4.7e-107 391.3 220 91.4
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 3.0e-85 318.9 218 77.1
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 2.9e-80 302.4 228 71.1
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 2.0e-73 279.6 209 71.8
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 1.6e-70 270.0 211 69.7
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 1.0e-64 250.8 223 61.0
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 8.5e-64 247.7 210 60.0
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 7.9e-62 241.1 206 64.6
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 1.0e-61 240.7 206 61.7
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 6.7e-61 238.0 207 63.3
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 3.3e-60 235.7 206 62.1
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 3.3e-60 235.7 208 61.5
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 4.4e-60 235.3 205 62.9
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 7.4e-60 234.6 215 57.2
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 7.4e-60 234.6 209 61.2
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.3e-59 233.8 223 61.9
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 1.7e-59 233.4 207 61.4
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 2.8e-59 232.6 208 58.2
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 8.2e-59 231.1 210 58.6
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 1.4e-58 230.3 217 59.0
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 1.4e-58 230.3 179 68.2
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 5.3e-58 228.4 206 58.7
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 6.9e-58 228.0 206 59.2
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 6.9e-58 228.0 215 57.7
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 2.0e-57 226.5 208 57.7
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 3.8e-56 222.2 206 57.8
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 8.5e-56 221.1 209 57.9
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 2.5e-55 219.5 209 57.4
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 4.2e-55 218.8 207 57.0
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 1.2e-54 217.2 235 54.0
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 2.1e-54 216.5 207 57.0
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 2.1e-54 216.5 210 55.7
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 2.1e-54 216.5 209 56.5
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 3.6e-54 215.7 207 57.0
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 3.6e-54 215.7 206 55.8
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 4.7e-54 215.3 203 59.6
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 6.1e-54 214.9 206 55.8
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 1.8e-53 213.4 206 55.8
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 1.8e-53 213.4 206 55.8
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 3.9e-53 212.2 204 54.4
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 6.7e-53 211.5 208 57.7
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 2.0e-52 209.9 215 57.7
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 7.4e-52 208.0 206 53.9
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 7.4e-52 208.0 204 53.9
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 1.7e-51 206.8 204 54.4
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 6.3e-51 204.9 213 54.0
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 6.3e-51 204.9 209 53.1
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 1.4e-50 203.8 224 54.9
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 5.3e-50 201.8 212 50.5
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 1.6e-49 200.3 204 53.4
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 1.0e-48 197.6 206 52.4
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 1.3e-48 197.2 203 54.2
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 6.5e-48 194.9 201 53.7
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 2.7e-46 189.5 201 50.2
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 3.6e-46 189.1 205 48.3
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 2.3e-45 186.4 207 50.2
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 2.3e-45 186.4 213 49.8
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 3.3e-44 182.6 212 50.0
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 2.4e-42 176.4 208 48.6
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 4.1e-42 175.6 215 49.8
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 5.3e-42 175.3 272 40.4
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 1.1e-39 167.5 204 47.5
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 1.9e-39 166.8 273 40.7
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 1.6e-38 163.7 212 44.8
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 2.1e-38 163.3 207 46.9
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 6.1e-38 161.8 202 43.6
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 1.8e-37 160.2 200 48.0
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 1.8e-37 160.2 206 48.5
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 2.3e-37 159.8 209 47.4
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.5e-36 157.1 163 51.5
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 7.5e-36 154.8 163 50.3
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 7.5e-36 154.8 163 50.3
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 1.3e-35 154.1 207 49.3
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.7e-35 153.7 163 50.3
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 3.7e-35 152.5 209 45.9
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 6.3e-35 151.8 221 43.9
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 4.1e-34 149.1 207 42.5
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.2e-33 147.5 220 44.5
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 4.5e-33 145.6 161 52.2
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 7.7e-33 144.8 212 42.0
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 1.7e-32 143.7 212 41.5
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 2.9e-32 142.9 205 43.9
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 2.9e-32 142.9 205 43.9
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 3.8e-32 142.5 208 42.3
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 5.0e-32 142.1 206 46.1
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 6.5e-32 141.7 161 49.7
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 6.5e-32 141.7 183 51.4
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 6.5e-32 141.7 183 51.4
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 6.5e-32 141.7 183 51.4
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 6.5e-32 141.7 183 51.4
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 3.2e-31 139.4 209 41.1
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 9.5e-31 137.9 210 40.0
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 1.2e-30 137.5 203 42.4
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 1.6e-30 137.1 208 42.3
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 1.4e-29 134.0 208 40.9
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 1.4e-29 134.0 208 40.9
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 2.3e-29 133.3 203 42.4
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 2.3e-29 133.3 164 46.3
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 4.0e-29 132.5 204 41.7
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 5.2e-29 132.1 205 42.0
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 6.8e-29 131.7 209 40.7
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 2.0e-28 130.2 203 40.4
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 2.0e-28 130.2 205 41.5
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 7.5e-28 128.3 214 36.9
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 7.5e-28 128.3 208 38.9
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 7.5e-28 128.3 208 38.9
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 2.2e-27 126.7 207 40.6
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 3.7e-27 125.9 231 37.2
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 8.3e-27 124.8 172 49.4
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 8.3e-27 124.8 222 36.5
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.6e-25 120.6 141 48.9
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 1.3e-24 117.5 200 39.0
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 1.7e-24 117.1 205 37.6
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 2.3e-24 116.7 219 34.7
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 2.9e-24 116.3 163 41.7
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 3.3e-23 112.8 124 49.2
unitig_578.g16398 Utricularia gibba HOM05D005675 ORTHO05D006884 1.7e-19 100.5 110 44.5
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 2.2e-19 100.1 208 35.6
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 1.6e-17 94.0 201 29.4
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 5.0e-16 89.0 165 40.6
Gohir.D08G027550 Gossypium hirsutum HOM05D005675 ORTHO05D006884 6.6e-16 88.6 66 63.6
Gorai.004G024600 Gossypium raimondii HOM05D005675 ORTHO05D006884 3.6e-14 82.8 66 60.6
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 3.1e-13 79.7 78 51.3
Sopen00g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 7.0e-10 68.6 61 63.9
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 2.7e-09 66.6 201 30.3
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 1.1e-07 61.2 43 62.8
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 1.5e-07 60.8 64 51.6
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 1.9e-07 60.5 45 62.2
AagrBONN_evm.TU.Sc2ySwM_344.4450 Anthoceros agrestis HOM05D034800 ORTHO05D006884 3.3e-07 59.7 233 24.0
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 7.3e-07 58.5 243 23.9
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 1.2e-06 57.8 234 25.2
Sabra18G0125400 Salix brachista HOM05D000311 ORTHO05D000183 3.6e-06 56.2 43 62.8
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 8.1e-06 55.1 45 60.0


User provided reference genes

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