Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020110 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 4.4e-86 321.2 160 100.0
CSS0008763 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.7e-85 319.3 160 99.4
CSS0030884 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.7e-85 319.3 160 99.4
CSS0049005 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 3.7e-85 318.2 160 98.8
CSS0045734 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 6.3e-85 317.4 160 98.8
CSS0023765 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.0e-82 307.8 160 93.1
CSS0048540 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.5e-81 306.2 160 91.2
CSS0002224 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.2e-79 297.7 160 90.0
CSS0036407 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 4.9e-77 291.2 160 87.5
CSS0021615 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.0e-74 281.2 160 83.1
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.0e-39 164.1 109 67.0
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 9.0e-39 164.1 109 67.0
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.2e-38 163.7 109 66.1
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.2e-37 159.5 109 65.1
CSS0048564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 3.8e-37 158.7 184 47.3
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 4.9e-37 158.3 109 65.1
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.3e-24 117.1 135 43.0
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.8e-23 113.2 150 40.7
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.0e-23 112.1 135 43.7
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 7.6e-22 107.8 139 39.6
CSS0045174 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.3e-21 107.1 109 49.5
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 1.3e-21 107.1 130 40.8
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 1.4e-20 103.6 133 39.1
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 2.5e-20 102.8 133 39.1
CSS0050454 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.5e-20 101.7 108 47.2
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 5.5e-20 101.7 133 38.3
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 2.1e-19 99.8 133 38.3
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 5.6e-17 91.7 139 36.7
Rhsim05G0112400 Rhododendron simsii HOM05D011579 ORTHO05D011435 6.2e-16 88.2 66 57.6
CSS0019622 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.3e-15 85.1 60 66.7
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-15 85.1 118 39.8
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 1.2e-14 84.0 76 51.3
Rhsim05G0087700 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.0e-14 83.2 65 55.4
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-14 82.8 136 35.3
RhsimUnG0076900 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.6e-14 82.8 67 53.7
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-14 81.3 136 35.3
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-14 81.3 136 35.3
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-13 80.9 129 34.1
Rhsim01G0119600 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.2e-13 79.7 75 50.7
Rhsim09G0078700 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.2e-13 79.7 112 39.3
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-13 79.3 133 33.8
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-13 79.0 136 34.6
Rhsim04G0154500 Rhododendron simsii HOM05D011579 ORTHO05D011435 4.9e-13 78.6 65 52.3
RhsimUnG0164400 Rhododendron simsii HOM05D011579 ORTHO05D011435 6.5e-13 78.2 65 53.8
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 1.1e-12 77.4 130 35.4
CSS0000617 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.4e-12 77.0 82 50.0
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 1.9e-12 76.6 130 35.4
Rhsim01G0121300 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.5e-12 76.3 67 49.3
vmacro03392 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 2.5e-12 76.3 121 37.2
vmacro16050 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 2.5e-12 76.3 121 37.2
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-12 75.5 139 33.8
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-12 75.1 129 33.3
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 9.3e-12 74.3 137 32.8
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 9.3e-12 74.3 136 33.8
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-11 73.9 132 33.3
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-11 73.9 129 35.7
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-11 73.6 141 33.3
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-11 73.6 141 33.3
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-11 73.6 70 48.6
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-11 73.6 141 33.3
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-11 72.8 137 34.3
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-11 72.4 76 47.4
Rhsim08G0127400 Rhododendron simsii HOM05D011579 ORTHO05D011435 3.5e-11 72.4 71 50.7
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 4.6e-11 72.0 137 33.6
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-10 70.9 137 32.1
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-10 70.5 135 31.9
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-10 70.1 135 32.6
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-10 69.7 137 32.1
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-10 69.3 76 46.1
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-10 68.9 133 32.3
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-10 68.9 67 44.8
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-10 68.2 137 31.4
MD06G1202700 Malus domestica HOM05D000115 ORTHO05D003511 6.7e-10 68.2 71 43.7
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-10 67.8 69 49.3
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-10 67.8 133 32.3
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-09 67.0 69 47.8
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-09 67.0 69 49.3
Migut.J01216 Erythranthe guttata HOM05D000176 ORTHO05D000106 1.9e-09 66.6 79 40.5
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-09 65.1 69 46.4
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.4e-09 64.7 83 37.3
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.4e-09 64.7 131 30.5
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 9.7e-09 64.3 68 47.1
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-08 63.9 71 45.1
Aqoxy6G02234 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 2.2e-08 63.2 67 49.3
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-08 63.2 113 32.7
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-08 62.8 71 43.7
Aqoxy3G01710 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 4.8e-08 62.0 67 47.8
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 4.8e-08 62.0 69 52.2
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-08 61.6 74 41.9
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-08 61.6 74 44.6
Rhsim10G0126300 Rhododendron simsii HOM05D011579 ORTHO05D011435 6.3e-08 61.6 65 44.6
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-07 60.5 132 30.3
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-07 59.7 134 28.4
Lj4P686T45 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-07 59.3 113 35.4
Lj2A87G47 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-07 58.9 113 33.6
Lju2561C0T1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-07 58.9 48 54.2
EL10Ac3g06792 Beta vulgaris HOM05D000176 ORTHO05D000106 5.3e-07 58.5 61 39.3
Aqoxy6G02007 Aquilegia oxysepala HOM05D025411 ORTHO05D000106 6.9e-07 58.2 122 28.7
EL10Ac7g17342 Beta vulgaris HOM05D000176 ORTHO05D000106 6.9e-07 58.2 61 39.3
EL10Ac7g17344 Beta vulgaris HOM05D000176 ORTHO05D000106 6.9e-07 58.2 61 39.3
Lj2A664T7 Lonicera japonica HOM05D000176 ORTHO05D002183 6.9e-07 58.2 113 32.7
EL10Ac2g02712 Beta vulgaris HOM05D000176 ORTHO05D000106 9.0e-07 57.8 61 39.3
Lj7P460T35 Lonicera japonica HOM05D000176 ORTHO05D000106 9.0e-07 57.8 70 41.4
EL10Ac5g12113 Beta vulgaris HOM05D000176 ORTHO05D002183 1.2e-06 57.4 61 37.7
FvH4_5g13891 Fragaria vesca HOM05D000176 ORTHO05D000106 1.2e-06 57.4 143 25.2
TWI73G0304 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 1.2e-06 57.4 133 30.1
Lj2C845T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-06 57.0 47 59.6
EL10Ac6g14114 Beta vulgaris HOM05D000176 ORTHO05D000106 3.4e-06 55.8 61 39.3
Lj4C678T2 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-06 55.8 47 53.2
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-06 55.8 71 40.8
Aqoxy7G02369 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 4.5e-06 55.5 91 36.3
Aqoxy7G02373 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 4.5e-06 55.5 91 36.3
Lj7A309T11 Lonicera japonica HOM05D000176 ORTHO05D000106 5.9e-06 55.1 94 35.1
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 5.9e-06 55.1 158 28.5
Aqoxy2G02523 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 1.0e-05 54.3 80 37.5


User provided reference genes

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