Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.9e-176 620.9 292 100.0
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 8.8e-101 370.9 251 73.7
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.6e-92 342.8 264 68.2
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 6.2e-30 135.6 228 33.3
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 9.6e-23 111.7 254 32.3
CSS0016458 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.8e-22 109.4 174 41.4
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 9.0e-21 105.1 246 29.3
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.6e-20 103.6 310 25.2
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.7e-19 100.9 229 30.6
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 2.9e-19 100.1 248 29.0
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.8e-19 99.8 310 24.8
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 3.8e-19 99.8 247 29.1
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.5e-19 99.0 314 25.8
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 6.0e-17 92.4 196 30.6
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.0e-16 91.7 354 22.9
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 2.5e-15 87.0 233 29.2
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 3.3e-15 86.7 241 27.4
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.8e-14 83.6 120 32.5
Rhsim01G0047800 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.7e-14 83.2 157 38.9
Actinidia12328 Actinidia chinensis HOM05D008219 ORTHO05D009356 6.3e-14 82.4 123 39.0
CSS0020841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 6.3e-14 82.4 242 27.3
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-13 81.6 125 33.6
Rhsim01G0053100 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.4e-13 80.5 156 38.5
CSS0001491 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.0e-13 78.6 210 26.2
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 9.0e-13 78.6 153 33.3
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 9.0e-13 78.6 262 23.3
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.2e-12 78.2 228 29.4
Rhsim05G0024200 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.5e-12 77.8 160 38.1
Rhsim12G0049400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.5e-12 77.8 158 38.6
CSS0017101 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.0e-12 77.4 219 30.6
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 3.4e-12 76.6 153 32.7
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.5e-12 76.3 76 50.0
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 4.5e-12 76.3 250 27.2
Actinidia26692 Actinidia chinensis HOM05D008219 ORTHO05D009356 7.6e-12 75.5 140 32.1
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 7.6e-12 75.5 191 27.7
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 1.0e-11 75.1 255 27.5
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-11 74.7 127 33.9
CSS0042477 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D009356 5.0e-11 72.8 113 32.7
Actinidia36659 Actinidia chinensis HOM05D012898 ORTHO05D009356 6.5e-11 72.4 127 33.1
CSS0021702 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 6.5e-11 72.4 181 29.3
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 6.5e-11 72.4 70 50.0
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 1.9e-10 70.9 192 29.2
Actinidia07483 Actinidia chinensis HOM05D011882 ORTHO05D011057 2.5e-10 70.5 56 57.1
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 7.2e-10 68.9 165 27.9
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 7.2e-10 68.9 162 32.1
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 7.2e-10 68.9 252 26.2
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 9.3e-10 68.6 130 31.5
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.6e-09 67.8 233 23.2
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 2.1e-09 67.4 79 45.6
CSS0011675 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.7e-09 67.0 271 24.4
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.7e-09 67.0 123 30.9
CSS0042955 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D009356 4.6e-09 66.2 55 47.3
Glyma.02G165100 Glycine max HOM05D002777 ORTHO05D001516 7.9e-09 65.5 304 22.4
CSS0047350 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.0e-08 65.1 58 51.7
vmacro14260 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.8e-08 64.3 239 24.3
vmacro23283 Vaccinium macrocarpon HOM05D000163 ORTHO05D009356 1.8e-08 64.3 121 28.1
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.0e-08 63.5 46 63.0
Ah.08g219520 Amaranthus hybridus HOM05D008762 ORTHO05D011252 6.7e-08 62.4 320 25.6
Phvul.001G161800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.1e-07 61.6 268 24.6
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 1.5e-07 61.2 174 30.5
Lj1g0017175 Lotus japonicus HOM05D002777 ORTHO05D001516 1.9e-07 60.8 272 25.0
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 1.9e-07 60.8 134 30.6
Rhsim03G0015400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.3e-07 60.1 51 47.1
Lj4g0027037 Lotus japonicus HOM05D002777 ORTHO05D001516 5.7e-07 59.3 262 26.3
CSS0026316 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 7.4e-07 58.9 129 26.4
Phvul.008G101400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.4e-07 58.9 262 23.7
Rhsim02G0133000 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.4e-07 58.9 49 49.0
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 9.7e-07 58.5 87 35.6
Phvul.010G066000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.3e-06 58.2 252 25.4
Sc22g0001820 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.3e-06 58.2 210 24.3
Rhsim01G0127900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.6e-06 57.8 51 43.1
Rhsim05G0113800 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.6e-06 57.8 97 32.0
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.6e-06 57.8 75 37.3
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 2.2e-06 57.4 236 23.3
CSS0006937 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.8e-06 57.0 85 32.9
Phvul.007G112900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.8e-06 57.0 245 26.5
vmacro21273 Vaccinium macrocarpon HOM05D000097 ORTHO05D009673 2.8e-06 57.0 170 28.8
ECA246G3232 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.7e-06 56.6 222 25.2
Phvul.L001950 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.8e-06 56.2 240 25.8
Rhsim09G0042800 Rhododendron simsii HOM05D017214 ORTHO05D018100 4.8e-06 56.2 49 49.0
Rhsim10G0135400 Rhododendron simsii HOM05D001175 ORTHO05D003291 4.8e-06 56.2 85 31.8
vmacro10949 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 4.8e-06 56.2 117 28.2
Rhsim10G0184600 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.3e-06 55.8 56 41.1
RhsimUnG0052900 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.3e-06 55.8 56 41.1
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 6.3e-06 55.8 116 31.0
Phvul.010G029500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.2e-06 55.5 231 24.2


User provided reference genes

Program Settings