Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.8e-110 402.5 190 100.0
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.8e-110 402.5 190 100.0
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.4e-60 234.2 165 75.2
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.3e-57 226.1 147 78.9
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-50 203.8 140 75.0
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.6e-45 186.0 151 67.5
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 2.7e-42 176.0 171 56.7
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 3.5e-42 175.6 171 57.3
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 3.3e-40 169.1 171 53.2
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 8.1e-39 164.5 171 55.6
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 3.1e-38 162.5 174 52.9
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 3.1e-38 162.5 169 53.3
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 6.9e-38 161.4 171 55.0
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.2e-37 160.6 170 52.9
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 1.2e-37 160.6 171 53.8
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 7.6e-37 157.9 169 50.3
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 1.3e-36 157.1 172 52.3
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.7e-36 156.8 169 51.5
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 2.2e-36 156.4 170 50.0
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 3.8e-36 155.6 171 50.3
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 6.5e-36 154.8 171 50.9
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 6.5e-36 154.8 169 50.9
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 8.4e-36 154.5 171 49.1
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 1.4e-35 153.7 171 50.3
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 1.4e-35 153.7 170 49.4
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.5e-35 152.9 171 48.5
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 2.5e-35 152.9 170 51.8
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 2.5e-35 152.9 169 49.1
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 4.2e-35 152.1 170 50.6
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 4.2e-35 152.1 167 49.7
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 4.2e-35 152.1 170 49.4
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 5.5e-35 151.8 171 48.5
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 7.1e-35 151.4 171 50.3
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 9.3e-35 151.0 171 48.5
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 9.3e-35 151.0 171 48.5
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 4.6e-34 148.7 171 48.0
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 7.9e-34 147.9 172 48.8
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.8e-33 146.7 140 54.3
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 5.1e-33 145.2 142 52.1
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 1.1e-32 144.1 171 48.5
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 1.1e-32 144.1 173 48.6
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 1.5e-32 143.7 142 51.4
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 3.3e-32 142.5 171 48.5
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 4.3e-32 142.1 190 45.8
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 4.3e-32 142.1 170 49.4
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 5.7e-32 141.7 173 48.0
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 1.6e-31 140.2 172 48.8
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 2.1e-31 139.8 171 47.4
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 2.8e-31 139.4 172 47.7
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 2.8e-31 139.4 140 52.9
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 4.8e-31 138.7 143 51.0
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 4.8e-31 138.7 140 52.9
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 8.2e-31 137.9 180 46.7
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 1.8e-30 136.7 173 48.0
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 1.8e-30 136.7 142 52.1
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 1.8e-30 136.7 142 52.1
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 2.0e-29 133.3 174 45.4
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 2.0e-29 133.3 168 45.2
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 2.6e-29 132.9 151 47.7
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 2.6e-29 132.9 172 44.2
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 4.5e-29 132.1 173 48.0
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 5.9e-29 131.7 169 46.7
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 7.6e-29 131.3 172 43.0
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.0e-28 131.0 174 43.7
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 1.7e-28 130.2 151 47.0
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.7e-28 130.2 171 43.9
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 2.2e-28 129.8 171 42.1
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 2.9e-28 129.4 171 42.1
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 2.9e-28 129.4 171 42.1
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 2.9e-28 129.4 171 43.3
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 2.9e-28 129.4 172 45.9
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 2.9e-28 129.4 169 45.0
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 5.0e-28 128.6 172 42.4
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 6.5e-28 128.3 172 41.9
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 8.4e-28 127.9 140 47.9
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 1.1e-27 127.5 172 41.9
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 1.1e-27 127.5 172 41.9
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 1.1e-27 127.5 172 43.0
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 2.5e-27 126.3 172 44.8
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 3.2e-27 125.9 147 46.9
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 7.2e-27 124.8 172 44.8
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 1.6e-26 123.6 172 40.7
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 2.7e-26 122.9 170 43.5
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 2.7e-26 122.9 172 40.7
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 7.9e-26 121.3 171 41.5
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 7.9e-26 121.3 171 42.1
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 1.3e-25 120.6 172 39.5
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 1.6e-23 113.6 167 41.3
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 6.9e-22 108.2 169 37.3
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 6.9e-22 108.2 171 40.9
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 7.7e-21 104.8 126 46.0
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 2.2e-20 103.2 170 38.8
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 9.4e-19 97.8 176 36.9
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 2.7e-18 96.3 176 35.8
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 1.1e-16 90.9 64 70.3
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 8.2e-15 84.7 120 40.0
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 1.1e-14 84.3 140 35.7
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 5.3e-14 82.0 145 37.9
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 5.5e-11 72.0 48 72.9
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 7.9e-10 68.2 76 48.7
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 1.1e-06 57.8 59 50.8


User provided reference genes

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