Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 3.1e-61 238.4 131 100.0
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 5.4e-58 227.6 131 93.9
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 3.5e-57 224.9 131 93.1
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 1.0e-56 223.4 131 92.4
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.3e-56 223.0 131 91.6
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 2.3e-56 222.2 131 90.8
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 8.6e-56 220.3 131 91.6
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 1.1e-55 219.9 129 92.2
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 1.1e-55 219.9 131 91.6
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 1.1e-55 219.9 131 91.6
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 1.5e-55 219.5 131 90.1
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 2.5e-55 218.8 131 90.8
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 2.5e-55 218.8 131 90.1
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 5.6e-55 217.6 131 88.5
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 7.3e-55 217.2 131 89.3
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 7.3e-55 217.2 131 90.1
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 9.5e-55 216.9 127 92.1
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 1.6e-54 216.1 127 91.3
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 1.6e-54 216.1 131 89.3
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 2.1e-54 215.7 129 89.9
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 2.8e-54 215.3 129 89.9
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 4.7e-54 214.5 129 89.9
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 4.7e-54 214.5 127 90.6
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 4.7e-54 214.5 131 87.8
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 6.2e-54 214.2 129 89.1
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 6.2e-54 214.2 129 89.1
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 6.2e-54 214.2 131 88.5
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 6.2e-54 214.2 129 89.1
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 6.2e-54 214.2 129 89.9
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 8.1e-54 213.8 131 88.5
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 8.1e-54 213.8 131 87.0
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 1.1e-53 213.4 127 89.8
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.1e-53 213.4 131 86.3
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 1.1e-53 213.4 129 89.1
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 1.1e-53 213.4 131 87.8
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 1.1e-53 213.4 129 89.9
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 1.4e-53 213.0 129 89.1
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 1.4e-53 213.0 131 87.0
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.8e-53 212.6 129 89.1
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.8e-53 212.6 129 89.1
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 1.8e-53 212.6 131 84.7
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 1.8e-53 212.6 125 91.2
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 2.3e-53 212.2 129 88.4
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 3.1e-53 211.8 129 87.6
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 3.1e-53 211.8 131 86.3
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 4.0e-53 211.5 127 89.8
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 4.0e-53 211.5 130 90.0
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.0e-53 211.5 129 88.4
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 4.0e-53 211.5 129 88.4
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 6.8e-53 210.7 127 88.2
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 6.8e-53 210.7 131 84.0
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 6.8e-53 210.7 127 88.2
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 8.9e-53 210.3 131 85.5
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 8.9e-53 210.3 129 89.1
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 1.5e-52 209.5 131 84.0
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 4.4e-52 208.0 136 85.3
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 4.4e-52 208.0 126 88.1
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 5.8e-52 207.6 131 84.0
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 7.6e-52 207.2 129 88.4
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 9.9e-52 206.8 131 82.4
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.2e-51 205.7 129 86.8
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 2.9e-51 205.3 129 84.5
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 4.9e-51 204.5 129 82.9
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.1e-50 203.4 129 86.8
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 1.9e-50 202.6 140 80.7
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 4.1e-50 201.4 131 80.9
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 4.1e-50 201.4 131 80.9
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 4.1e-50 201.4 131 80.9
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 5.4e-50 201.1 129 81.4
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 5.4e-50 201.1 129 81.4
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 1.6e-49 199.5 131 80.2
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 1.6e-49 199.5 131 80.2
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 2.1e-49 199.1 131 83.2
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 6.0e-49 197.6 113 92.0
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 6.0e-49 197.6 131 78.6
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 1.0e-48 196.8 131 80.2
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.3e-48 196.4 144 77.1
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.7e-48 196.1 129 79.8
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 3.0e-48 195.3 129 79.8
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 3.0e-48 195.3 186 64.0
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 8.6e-48 193.7 122 86.1
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 4.3e-47 191.4 129 79.8
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 9.6e-47 190.3 113 89.4
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 4.7e-46 188.0 105 97.1
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 1.4e-45 186.4 111 86.5
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 1.4e-45 186.4 106 93.4
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 1.8e-45 186.0 104 97.1
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 2.4e-45 185.7 133 77.4
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 2.4e-45 185.7 113 85.8
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.1e-45 185.3 120 85.0
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 6.8e-45 184.1 110 89.1
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 1.5e-44 183.0 107 88.8
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.6e-44 182.2 120 83.3
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 4.4e-44 181.4 108 88.0
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 5.8e-44 181.0 121 76.0
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 5.8e-44 181.0 129 74.4
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 1.7e-43 179.5 117 83.8
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 2.2e-43 179.1 111 82.9
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 6.4e-43 177.6 105 90.5
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 1.1e-42 176.8 122 81.1
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 3.2e-42 175.3 129 76.0
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 5.4e-42 174.5 111 81.1
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 7.1e-42 174.1 113 79.6
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 4.6e-41 171.4 105 85.7
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 1.0e-40 170.2 131 74.0
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 6.6e-40 167.5 118 75.4
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 8.7e-40 167.2 110 80.0
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 3.3e-39 165.2 125 66.4
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 9.6e-39 163.7 162 59.9
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 9.6e-39 163.7 92 92.4
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 2.8e-38 162.2 87 96.6
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 4.8e-38 161.4 133 69.2
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 4.8e-38 161.4 92 90.2
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 1.8e-37 159.5 92 92.4
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 4.0e-37 158.3 126 65.1
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 5.3e-37 157.9 131 61.8
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 6.9e-37 157.5 87 93.1
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 9.0e-37 157.1 118 72.0
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 9.0e-37 157.1 92 87.0
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 2.0e-36 156.0 89 91.0
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 3.4e-36 155.2 121 69.4
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 4.4e-36 154.8 92 84.8
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 2.2e-35 152.5 117 72.6
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 6.4e-35 151.0 84 90.5
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 4.2e-34 148.3 87 92.0
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 5.4e-34 147.9 131 67.9
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 1.6e-33 146.4 88 88.6
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 2.1e-33 146.0 110 64.5
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 4.6e-33 144.8 92 80.4
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 1.0e-32 143.7 95 77.9
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 7.4e-31 137.5 95 82.1
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 1.1e-29 133.7 90 76.7
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 1.8e-29 132.9 102 72.5
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 2.2e-27 125.9 71 90.1
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 3.2e-26 122.1 92 72.8
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 7.1e-26 120.9 88 76.1
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 7.1e-26 120.9 92 72.8
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 5.1e-24 114.8 202 43.6
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 6.7e-24 114.4 63 93.7
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 1.6e-22 109.8 61 91.8
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 6.9e-21 104.4 111 58.6
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 2.0e-20 102.8 125 44.0
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 3.8e-19 98.6 121 42.1
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 8.4e-19 97.4 67 71.6
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 2.5e-18 95.9 64 73.4
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 7.1e-18 94.4 64 71.9
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 1.6e-17 93.2 78 61.5
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 3.5e-17 92.0 66 69.7
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 7.9e-17 90.9 65 70.8
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 6.7e-16 87.8 68 64.7
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 2.8e-14 82.4 119 39.5
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 2.8e-14 82.4 173 39.3
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 3.8e-11 72.0 123 35.0
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 3.5e-09 65.5 39 92.3
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 3.5e-09 65.5 124 38.7


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