Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020003 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D111145 3.7e-48 194.5 96 100.0
Oeu053212.1 Olea europaea HOM05D000257 ORTHO05D003333 3.8e-08 61.6 34 79.4
Duzib116G0164 Durio zibethinus HOM05D000257 ORTHO05D003333 4.9e-08 61.2 34 73.5
MSTRG.24976 Avicennia marina HOM05D000257 ORTHO05D003333 6.4e-08 60.8 34 76.5
CSS0038406 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D003333 6.4e-08 60.8 34 82.4
CSS0046514 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D003333 6.4e-08 60.8 34 82.4
GSVIVG01009042001 Vitis vinifera HOM05D000257 ORTHO05D003333 6.4e-08 60.8 34 76.5
CANSAT35G1064 Cannabis sativa HOM05D000257 ORTHO05D003333 8.4e-08 60.5 34 79.4
Actinidia30782 Actinidia chinensis HOM05D000257 ORTHO05D003333 1.1e-07 60.1 34 79.4
FvH4_2g09730 Fragaria vesca HOM05D000257 ORTHO05D003333 1.1e-07 60.1 34 76.5
FAN15G1513 Fragaria x ananassa HOM05D000257 ORTHO05D003333 1.1e-07 60.1 34 76.5
FAN20G0241 Fragaria x ananassa HOM05D000257 ORTHO05D003333 1.1e-07 60.1 34 76.5
Rhsim06G0080900 Rhododendron simsii HOM05D000257 ORTHO05D003333 1.4e-07 59.7 34 76.5
Lj4P725T15 Lonicera japonica HOM05D000257 ORTHO05D003333 1.9e-07 59.3 34 73.5
vmacro21262 Vaccinium macrocarpon HOM05D000257 ORTHO05D003333 1.9e-07 59.3 34 73.5
Aqoxy5G01916 Aquilegia oxysepala HOM05D000257 ORTHO05D003333 3.2e-07 58.5 34 73.5
Migut.E00939 Erythranthe guttata HOM05D000257 ORTHO05D003333 3.2e-07 58.5 34 76.5
RcHm_v2.0_Chr7g0238641 Rosa chinensis HOM05D000257 ORTHO05D003333 3.2e-07 58.5 34 76.5
RcHm_v2.0_Chr7g0243921 Rosa chinensis HOM05D000257 ORTHO05D003333 3.2e-07 58.5 34 76.5
SalBow7G3476 Salvia bowleyana HOM05D000257 ORTHO05D003333 3.2e-07 58.5 34 70.6
TAR376G0347 Trochodendron aralioides HOM05D000257 ORTHO05D003333 3.2e-07 58.5 34 70.6
Atru.chr13.1172 Acer truncatum HOM05D000257 ORTHO05D003333 5.4e-07 57.8 33 75.8
MD00G1009900 Malus domestica HOM05D000257 ORTHO05D003333 5.4e-07 57.8 34 70.6
MD08G1184600 Malus domestica HOM05D000257 ORTHO05D003333 5.4e-07 57.8 34 70.6
Cpa.g.sc36.144 Carica papaya HOM05D000257 ORTHO05D003333 7.1e-07 57.4 34 70.6
ClCG11G014140 Citrullus lanatus HOM05D000257 ORTHO05D003333 7.1e-07 57.4 34 73.5
Gorai.007G370700 Gossypium raimondii HOM05D000257 ORTHO05D003333 7.1e-07 57.4 34 67.6
Ciclev10001417m.g Citrus clementina HOM05D000257 ORTHO05D003333 9.3e-07 57.0 34 70.6
Cfa013647 Carpinus fangiana HOM05D000257 ORTHO05D003333 1.2e-06 56.6 34 73.5
FAN24G2690 Fragaria x ananassa HOM05D000257 ORTHO05D003333 1.2e-06 56.6 34 73.5
FAN24G2796 Fragaria x ananassa HOM05D000257 ORTHO05D003333 1.2e-06 56.6 34 73.5
Gohir.A11G321600 Gossypium hirsutum HOM05D000257 ORTHO05D003333 1.2e-06 56.6 34 67.6
Manes.18G066300 Manihot esculenta HOM05D000257 ORTHO05D003333 1.2e-06 56.6 34 70.6
CiPaw.08G046000 Carya illinoinensis HOM05D000257 ORTHO05D003333 1.6e-06 56.2 34 70.6
PSO210G1895 Papaver somniferum HOM05D000257 ORTHO05D003333 2.1e-06 55.8 34 70.6
PSO447G0353 Papaver somniferum HOM05D000257 ORTHO05D003333 2.1e-06 55.8 34 70.6
Prupe.1G518700 Prunus persica HOM05D000257 ORTHO05D003333 2.1e-06 55.8 34 70.6
Dinv14340 Davidia involucrata HOM05D000087 ORTHO05D001646 2.7e-06 55.5 34 70.6
Glyma.06G102600 Glycine max HOM05D000257 ORTHO05D003333 2.7e-06 55.5 34 67.6
Sed0021086 Sechium edule HOM05D000257 ORTHO05D003333 2.7e-06 55.5 34 67.6
DCAR_007578 Daucus carota HOM05D000257 ORTHO05D003333 3.5e-06 55.1 34 67.6
Haze_22284 Corylus avellana HOM05D000257 ORTHO05D003333 4.6e-06 54.7 34 67.6
MELO3C003570.2 Cucumis melo HOM05D000257 ORTHO05D003333 4.6e-06 54.7 34 70.6
Nitab4.5_0000232g0060 Nicotiana tabacum HOM05D000257 ORTHO05D003333 4.6e-06 54.7 34 67.6
THA.LOC109115979 Tarenaya hassleriana HOM05D000257 ORTHO05D003333 4.6e-06 54.7 34 70.6
Solyc04g074280.1 Solanum lycopersicum HOM05D000257 ORTHO05D003333 6.0e-06 54.3 34 67.6
Sopen04g029410 Solanum pennellii HOM05D000257 ORTHO05D003333 6.0e-06 54.3 34 67.6
PGSC0003DMG400031472 Solanum tuberosum HOM05D000257 ORTHO05D003333 6.0e-06 54.3 34 67.6
Thecc.08G105300 Theobroma cacao HOM05D000257 ORTHO05D003333 7.8e-06 53.9 34 61.8


User provided reference genes

Program Settings