Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020000 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D005164 1.3e-90 336.3 160 100.0
CSS0040926 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D005164 2.3e-74 282.3 160 83.8
Rhsim01G0160000 Rhododendron simsii HOM05D003518 ORTHO05D005164 7.0e-60 234.2 159 71.1
Dinv43741 Davidia involucrata HOM05D003518 ORTHO05D005164 3.3e-57 225.3 166 66.9
Dinv32408 Davidia involucrata HOM05D003518 ORTHO05D005164 6.2e-56 221.1 167 67.7
vmacro20980 Vaccinium macrocarpon HOM05D003518 ORTHO05D005164 5.2e-55 218.0 159 68.6
Hma1.2p1_0132F.1_g060640 Hydrangea macrophylla HOM05D003518 ORTHO05D005164 1.4e-47 193.4 165 61.2
TAR614G0002 Trochodendron aralioides HOM05D003518 ORTHO05D005164 3.1e-47 192.2 161 59.0
Actinidia33452 Actinidia chinensis HOM05D003518 ORTHO05D005164 3.4e-46 188.7 166 60.8
Lj9C575T5 Lonicera japonica HOM05D003518 ORTHO05D005164 5.8e-46 188.0 160 59.4
Prupe.2G151300 Prunus persica HOM05D003518 ORTHO05D005164 3.2e-44 182.2 159 56.0
HanXRQChr16g0523541 Helianthus annuus HOM05D003518 ORTHO05D005164 4.2e-44 181.8 148 56.8
Nn1g01294 Nelumbo nucifera HOM05D003518 ORTHO05D005164 5.4e-44 181.4 160 56.2
Nn6g34312 Nelumbo nucifera HOM05D003518 ORTHO05D005164 9.2e-44 180.6 165 55.2
MELO3C006158.2 Cucumis melo HOM05D003518 ORTHO05D005164 4.6e-43 178.3 161 52.8
COL.COLO4_12652 Corchorus olitorius HOM05D003518 ORTHO05D005164 6.0e-43 177.9 173 54.9
THA.LOC104802006 Tarenaya hassleriana HOM05D003518 ORTHO05D005164 1.7e-42 176.4 166 54.8
ClCG05G001980 Citrullus lanatus HOM05D003518 ORTHO05D005164 2.3e-42 176.0 159 53.5
TAR636G1560 Trochodendron aralioides HOM05D003518 ORTHO05D005164 5.1e-42 174.9 159 54.1
Sed0008201 Sechium edule HOM05D003518 ORTHO05D005164 8.7e-42 174.1 159 56.6
Sed0024132 Sechium edule HOM05D003518 ORTHO05D005164 1.1e-41 173.7 160 55.0
Gohir.A12G102800 Gossypium hirsutum HOM05D003518 ORTHO05D005164 1.9e-41 172.9 165 53.9
Potri.014G074300 Populus trichocarpa HOM05D003518 ORTHO05D005164 1.9e-41 172.9 159 57.2
Gorai.007G093900 Gossypium raimondii HOM05D003518 ORTHO05D005164 3.3e-41 172.2 171 53.8
Sabra14G0053000 Salix brachista HOM05D003518 ORTHO05D005164 3.3e-41 172.2 159 58.5
Atru.chr5.372 Acer truncatum HOM05D003518 ORTHO05D005164 4.3e-41 171.8 172 50.6
TWI59G1247 Tripterygium wilfordii HOM05D003518 ORTHO05D005164 7.3e-41 171.0 166 52.4
Gohir.D12G106000 Gossypium hirsutum HOM05D003518 ORTHO05D005164 9.6e-41 170.6 165 53.9
Sc23g0003400 Simmondsia chinensis HOM05D003518 ORTHO05D005164 9.6e-41 170.6 161 53.4
Thecc.01G371200 Theobroma cacao HOM05D003518 ORTHO05D005164 9.6e-41 170.6 174 54.0
CsaV3_3G009390 Cucumis sativus L. HOM05D003518 ORTHO05D005164 1.2e-40 170.2 160 51.2
Gorai.008G115300 Gossypium raimondii HOM05D003518 ORTHO05D005164 1.2e-40 170.2 165 53.9
TWI14G0835 Tripterygium wilfordii HOM05D003518 ORTHO05D005164 1.2e-40 170.2 166 51.2
Gohir.A11G083800 Gossypium hirsutum HOM05D003518 ORTHO05D005164 1.6e-40 169.9 171 52.6
Lsat_1_v5_gn_4_37220 Lactuca sativa HOM05D003518 ORTHO05D005164 2.1e-40 169.5 175 53.7
PGSC0003DMG401000007 Solanum tuberosum HOM05D003518 ORTHO05D005164 2.1e-40 169.5 168 53.0
ECA234G2542 Erigeron canadensis HOM05D003518 ORTHO05D005164 2.8e-40 169.1 101 71.3
Sabra02G0120000 Salix brachista HOM05D003518 ORTHO05D005164 2.8e-40 169.1 159 56.6
MD07G1123700 Malus domestica HOM05D003518 ORTHO05D005164 8.1e-40 167.5 159 52.2
Duzib138G0903 Durio zibethinus HOM05D003518 ORTHO05D005164 1.4e-39 166.8 173 52.0
FvH4_7g12710 Fragaria vesca HOM05D003518 ORTHO05D005164 1.4e-39 166.8 125 60.8
FAN06G1131 Fragaria x ananassa HOM05D003518 ORTHO05D005164 1.4e-39 166.8 125 60.8
MBI11_g05096_MAGBIO Magnolia biondii HOM05D003518 ORTHO05D005164 1.8e-39 166.4 150 55.3
CiPaw.02G164700 Carya illinoinensis HOM05D003518 ORTHO05D005164 2.4e-39 166.0 162 52.5
FAN06G5121 Fragaria x ananassa HOM05D003518 ORTHO05D005164 3.1e-39 165.6 125 60.0
Potri.002G151800 Populus trichocarpa HOM05D003518 ORTHO05D005164 3.1e-39 165.6 169 53.8
SGA_v2.0_scaffold153G37052 Striga asiatica HOM05D003518 ORTHO05D005164 3.1e-39 165.6 153 54.9
Haze_16711 Corylus avellana HOM05D003518 ORTHO05D005164 4.0e-39 165.2 163 52.1
Migut.B01669 Erythranthe guttata HOM05D003518 ORTHO05D005164 4.0e-39 165.2 101 74.3
Manes.01G263400 Manihot esculenta HOM05D003518 ORTHO05D005164 4.0e-39 165.2 169 52.1
Hund16973 Selenicereus undatus HOM05D003518 ORTHO05D005164 5.3e-39 164.9 152 55.9
Duzib133G1143 Durio zibethinus HOM05D003518 ORTHO05D005164 6.9e-39 164.5 168 51.8
FAN03G3110 Fragaria x ananassa HOM05D003518 ORTHO05D005164 6.9e-39 164.5 125 60.0
FAN10G3707 Fragaria x ananassa HOM05D003518 ORTHO05D005164 6.9e-39 164.5 125 60.0
Oeu059219.1 Olea europaea HOM05D003518 ORTHO05D005164 9.0e-39 164.1 164 54.3
RcHm_v2.0_Chr1g0351731 Rosa chinensis HOM05D003518 ORTHO05D005164 9.0e-39 164.1 145 56.6
FAN01G1761 Fragaria x ananassa HOM05D003518 ORTHO05D005164 1.2e-38 163.7 125 60.0
FAN10G3827 Fragaria x ananassa HOM05D003518 ORTHO05D005164 1.5e-38 163.3 125 60.0
PGR042G3961 Punica granatum HOM05D003518 ORTHO05D005164 1.5e-38 163.3 164 52.4
ATR0661G335 Amborella trichopoda HOM05D003518 ORTHO05D005164 2.0e-38 162.9 100 70.0
Aqoxy7G00493 Aquilegia oxysepala HOM05D003518 ORTHO05D005164 3.4e-38 162.2 160 50.0
Sc02g0002290 Simmondsia chinensis HOM05D003518 ORTHO05D005164 3.4e-38 162.2 175 52.6
Manes.05G041800 Manihot esculenta HOM05D003518 ORTHO05D005164 5.8e-38 161.4 165 51.5
CANSAT56G2265 Cannabis sativa HOM05D003518 ORTHO05D005164 9.9e-38 160.6 170 51.8
Aa31LG1G27140 Aethionema arabicum HOM05D003518 ORTHO05D005164 1.3e-37 160.2 166 50.0
Cpa.g.sc18.167 Carica papaya HOM05D003518 ORTHO05D005164 1.3e-37 160.2 165 52.1
MD02G1197300 Malus domestica HOM05D003518 ORTHO05D005164 1.7e-37 159.8 159 51.6
arahy.Tifrunner.gnm1.ann1.I486B7 Arachis hypogaea HOM05D003518 ORTHO05D005164 2.2e-37 159.5 109 68.8
EL10Ac1g00954 Beta vulgaris HOM05D003518 ORTHO05D005164 2.2e-37 159.5 140 56.4
Hund27333 Selenicereus undatus HOM05D003518 ORTHO05D005164 2.2e-37 159.5 166 51.2
DCAR_006891 Daucus carota HOM05D003518 ORTHO05D005164 3.8e-37 158.7 141 54.6
unitig_749.g14360 Utricularia gibba HOM05D003518 ORTHO05D005164 3.8e-37 158.7 147 53.7
CAN.G170.67 Capsicum annuum HOM05D003518 ORTHO05D005164 6.4e-37 157.9 168 47.0
SalBow7G3081 Salvia bowleyana HOM05D003518 ORTHO05D005164 8.4e-37 157.5 158 51.9
BolC3t15366H Brassica oleracea HOM05D003518 ORTHO05D005164 1.4e-36 156.8 159 49.7
CDE04G1942 Ceratophyllum demersum HOM05D000131 ORTHO05D000086 1.4e-36 156.8 153 52.9
A03p25290 Brassica napus HOM05D003518 ORTHO05D005164 1.9e-36 156.4 159 50.3
DCAR_015924 Daucus carota HOM05D003518 ORTHO05D005164 1.9e-36 156.4 160 51.9
arahy.Tifrunner.gnm1.ann1.UCSC4W Arachis hypogaea HOM05D003518 ORTHO05D005164 2.4e-36 156.0 109 68.8
BcaB01g03262 Brassica carinata HOM05D003518 ORTHO05D005164 2.4e-36 156.0 158 50.6
BcaC01g05115 Brassica carinata HOM05D003518 ORTHO05D005164 3.2e-36 155.6 159 49.7
Eucgr.E01329 Eucalyptus grandis HOM05D003518 ORTHO05D005164 3.2e-36 155.6 189 45.0
Oeu024431.2 Olea europaea HOM05D003518 ORTHO05D005164 4.2e-36 155.2 168 53.6
VMungo0331G0661 Vigna mungo HOM05D003518 ORTHO05D005164 4.2e-36 155.2 107 64.5
Lsat_1_v5_gn_7_6740 Lactuca sativa HOM05D003518 ORTHO05D005164 5.4e-36 154.8 151 49.0
BcaB06g29432 Brassica carinata HOM05D003518 ORTHO05D005164 7.1e-36 154.5 164 47.6
QL08p051054 Quercus lobata HOM05D003518 ORTHO05D005164 7.1e-36 154.5 169 48.5
Ciclev10019439m.g Citrus clementina HOM05D003518 ORTHO05D005164 9.3e-36 154.1 160 49.4
Solyc01g091950.4 Solanum lycopersicum HOM05D003518 ORTHO05D005164 9.3e-36 154.1 168 49.4
BcaB01g03260 Brassica carinata HOM05D003518 ORTHO05D005164 1.2e-35 153.7 158 50.0
BraA03t11733Z Brassica rapa HOM05D003518 ORTHO05D005164 1.2e-35 153.7 159 49.7
MSTRG.20781 Avicennia marina HOM05D003518 ORTHO05D005164 1.6e-35 153.3 147 53.1
CiPaw.01G258000 Carya illinoinensis HOM05D003518 ORTHO05D005164 1.6e-35 153.3 163 50.9
Phvul.010G088200 Phaseolus vulgaris HOM05D003518 ORTHO05D005164 1.6e-35 153.3 105 63.8
C03p30180 Brassica napus HOM05D003518 ORTHO05D005164 2.1e-35 152.9 162 49.4
Glyma.07G080800 Glycine max HOM05D003518 ORTHO05D005164 2.1e-35 152.9 106 65.1
Sp4g27710 Schrenkiella parvula HOM05D003518 ORTHO05D005164 2.7e-35 152.5 172 47.1
Thhalv10001388m.g Eutrema salsugineum HOM05D003518 ORTHO05D005164 4.6e-35 151.8 173 49.1
Glyma.03G019200 Glycine max HOM05D003518 ORTHO05D005164 4.6e-35 151.8 105 63.8
arahy.Tifrunner.gnm1.ann1.4HY23M Arachis hypogaea HOM05D003518 ORTHO05D005164 7.8e-35 151.0 101 64.4
arahy.Tifrunner.gnm1.ann1.N1W82K Arachis hypogaea HOM05D003518 ORTHO05D005164 7.8e-35 151.0 101 64.4
AUR62033382 Chenopodium quinoa HOM05D003518 ORTHO05D005164 7.8e-35 151.0 125 56.8
Carub.0004s2832 Capsella rubella HOM05D003518 ORTHO05D005164 1.3e-34 150.2 163 48.5
AL4G44840 Arabidopsis lyrata HOM05D003518 ORTHO05D005164 2.3e-34 149.4 159 49.1
HanXRQChr04g0122151 Helianthus annuus HOM05D003518 ORTHO05D005164 3.0e-34 149.1 125 53.6
Psat4g198920 Pisum sativum HOM05D003518 ORTHO05D005164 5.1e-34 148.3 162 49.4
Ah.05g175810 Amaranthus hybridus HOM05D003518 ORTHO05D005164 6.6e-34 147.9 102 63.7
BcaC02g07077 Brassica carinata HOM05D003518 ORTHO05D005164 6.6e-34 147.9 165 47.3
C04p71760 Brassica napus HOM05D003518 ORTHO05D005164 6.6e-34 147.9 165 46.7
BolC4t28675H Brassica oleracea HOM05D003518 ORTHO05D005164 6.6e-34 147.9 165 47.3
Nitab4.5_0003182g0050 Nicotiana tabacum HOM05D003518 ORTHO05D005164 1.1e-33 147.1 153 49.7
AT2G45670 Arabidopsis thaliana HOM05D003518 ORTHO05D005164 1.5e-33 146.7 167 45.5
A04p33950 Brassica napus HOM05D003518 ORTHO05D005164 1.5e-33 146.7 159 46.5
BraA04t18856Z Brassica rapa HOM05D003518 ORTHO05D005164 1.5e-33 146.7 159 46.5
HanXRQChr06g0169291 Helianthus annuus HOM05D003518 ORTHO05D005164 1.5e-33 146.7 101 63.4
Nitab4.5_0001127g0040 Nicotiana tabacum HOM05D003518 ORTHO05D005164 1.5e-33 146.7 155 49.7
Lalb_Chr04g0256591 Lupinus albus HOM05D003518 ORTHO05D005164 1.9e-33 146.4 160 46.2
Lj3g0010840 Lotus japonicus HOM05D003518 ORTHO05D005164 3.3e-33 145.6 102 62.7
AUR62004275 Chenopodium quinoa HOM05D003518 ORTHO05D005164 4.3e-33 145.2 159 48.4
ECA236G3950 Erigeron canadensis HOM05D003518 ORTHO05D005164 5.6e-33 144.8 139 51.1
Lalb_Chr17g0340051 Lupinus albus HOM05D003518 ORTHO05D005164 1.1e-31 140.6 160 46.2
Rhsim07G0023000 Rhododendron simsii HOM05D003518 ORTHO05D005164 3.1e-31 139.0 142 49.3
Medtr8g033180 Medicago truncatula HOM05D003518 ORTHO05D005164 6.9e-31 137.9 102 61.8
PSO478G4904 Papaver somniferum HOM05D003518 ORTHO05D005164 9.0e-31 137.5 101 61.4
PSO782G5439 Papaver somniferum HOM05D003518 ORTHO05D005164 9.0e-31 137.5 101 61.4
Peaxi162Scf00021g00116 Petunia axillaris HOM05D003518 ORTHO05D005164 3.4e-30 135.6 141 50.4
SEGI_40964 Sequoiadendron giganteum HOM05D003518 ORTHO05D005164 2.2e-29 132.9 100 59.0
MD15G1322400 Malus domestica HOM05D003518 ORTHO05D005164 9.6e-25 117.5 159 43.4
Ca_23782_v3 Cicer arietinum L. HOM05D003518 ORTHO05D005164 1.3e-24 117.1 85 64.7
AagrBONN_evm.TU.Sc2ySwM_228.3879 Anthoceros agrestis HOM05D003518 ORTHO05D005164 5.8e-22 108.2 83 56.6
Os06g0712300 Oryza sativa ssp. japonica HOM05D003518 ORTHO05D005164 4.9e-21 105.1 89 57.3
Zm00001eb227780 Zea mays HOM05D003518 ORTHO05D005164 1.1e-20 104.0 109 52.3
Zm00001eb272520 Zea mays HOM05D003518 ORTHO05D005164 7.1e-20 101.3 109 50.5
RcHm_v2.0_Chr7g0222481 Rosa chinensis HOM05D001448 ORTHO05D037488 1.2e-19 100.5 109 51.4
Mapoly0012s0208 Marchantia polymorpha HOM05D003518 ORTHO05D005164 3.5e-19 99.0 104 42.3
Pp3c7_19140 Physcomitrium patens HOM05D003518 ORTHO05D005164 6.7e-18 94.7 144 38.9
CBR_g53493 Chara braunii HOM05D003518 ORTHO05D000301 5.6e-17 91.7 96 44.8
SMO141G0001 Selaginella moellendorffii HOM05D003518 ORTHO05D005164 1.3e-16 90.5 158 34.2
Pp3c11_9750 Physcomitrium patens HOM05D003518 ORTHO05D005164 6.2e-16 88.2 143 36.4
Pp3c1_8110 Physcomitrium patens HOM05D003518 ORTHO05D005164 1.1e-15 87.4 125 38.4
Pp3c1_8111 Physcomitrium patens HOM05D003518 ORTHO05D005164 1.1e-15 87.4 125 38.4
Haze_10897 Corylus avellana HOM05D003518 ORTHO05D005164 8.4e-13 77.8 52 63.5
AagrBONN_evm.TU.Sc2ySwM_117.674 Anthoceros agrestis HOM05D003518 ORTHO05D005164 4.6e-11 72.0 92 40.2
Pp3c6_12040 Physcomitrium patens HOM05D003518 ORTHO05D005164 1.3e-10 70.5 99 41.4
SMO270G0098 Selaginella moellendorffii HOM05D003518 ORTHO05D005164 2.3e-10 69.7 138 30.4
Pp3c5_19320 Physcomitrium patens HOM05D003518 ORTHO05D005164 2.5e-09 66.2 92 40.2
Glyma.08G262200 Glycine max HOM05D003518 ORTHO05D005164 9.7e-09 64.3 40 60.0
Mapoly0076s0022 Marchantia polymorpha HOM05D003518 ORTHO05D005164 3.1e-07 59.3 96 36.5
HPP92_012967 Vanilla planifolia HOM05D003518 ORTHO05D005164 1.5e-06 57.0 24 91.7
AagrBONN_evm.TU.Sc2ySwM_344.4113 Anthoceros agrestis HOM05D003518 ORTHO05D005164 7.7e-06 54.7 90 34.4


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