Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 9.4e-132 473.8 285 100.0
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 7.5e-129 464.2 285 95.4
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 1.5e-76 290.4 278 58.6
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 1.9e-76 290.0 208 72.1
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 1.1e-71 274.2 207 66.2
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 2.4e-71 273.1 204 66.2
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 4.2e-71 272.3 204 70.1
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 1.6e-70 270.4 207 65.2
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 1.0e-69 267.7 207 66.2
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 1.0e-69 267.7 207 66.2
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 3.0e-69 266.2 207 66.2
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 6.6e-69 265.0 206 65.5
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 4.3e-68 262.3 209 65.1
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 5.6e-68 261.9 206 65.0
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 5.6e-68 261.9 206 67.0
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 9.6e-68 261.2 208 64.9
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 9.6e-68 261.2 202 64.9
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 3.6e-67 259.2 208 64.9
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 4.8e-67 258.8 208 64.4
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 8.1e-67 258.1 191 69.6
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 1.1e-66 257.7 208 63.5
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 2.4e-66 256.5 207 63.8
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 2.4e-66 256.5 207 63.3
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 5.3e-66 255.4 208 61.5
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 2.0e-65 253.4 208 62.0
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 1.3e-64 250.8 204 62.7
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 1.7e-64 250.4 211 61.6
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 3.8e-64 249.2 209 58.9
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 8.4e-64 248.1 205 61.5
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 2.4e-63 246.5 207 61.8
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 2.4e-63 246.5 206 59.7
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 4.2e-63 245.7 207 58.9
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 4.2e-63 245.7 204 63.7
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 7.1e-63 245.0 209 57.9
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 1.6e-62 243.8 207 58.5
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 1.6e-62 243.8 203 60.6
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 2.7e-62 243.0 210 60.5
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 4.6e-62 242.3 209 57.4
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 4.6e-62 242.3 206 61.2
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 4.6e-62 242.3 211 60.2
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 4.6e-62 242.3 211 60.2
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 6.0e-62 241.9 203 60.1
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 7.9e-62 241.5 204 59.3
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 1.0e-61 241.1 207 58.5
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 2.3e-61 240.0 207 58.0
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 3.0e-61 239.6 211 59.2
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 5.1e-61 238.8 201 60.2
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 5.1e-61 238.8 211 59.2
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 5.1e-61 238.8 207 58.0
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 8.7e-61 238.0 204 60.3
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 2.5e-60 236.5 207 58.0
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 3.3e-60 236.1 198 58.1
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 7.4e-60 235.0 194 62.9
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 7.4e-60 235.0 210 57.6
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 7.4e-60 235.0 206 56.8
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 9.6e-60 234.6 192 60.9
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.3e-59 234.2 202 58.9
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 1.3e-59 234.2 200 58.5
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 1.3e-59 234.2 206 56.3
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 1.6e-59 233.8 200 59.0
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 1.6e-59 233.8 210 55.7
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 1.6e-59 233.8 208 60.6
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 2.8e-59 233.0 200 59.5
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 2.8e-59 233.0 197 58.4
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 2.8e-59 233.0 197 58.4
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 8.1e-59 231.5 215 59.1
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 1.1e-58 231.1 217 53.5
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 1.4e-58 230.7 191 58.6
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 1.8e-58 230.3 197 58.4
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 1.8e-58 230.3 197 58.4
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 1.8e-58 230.3 197 58.4
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 2.4e-58 229.9 206 55.8
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 4.0e-58 229.2 202 57.9
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 4.0e-58 229.2 203 56.7
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 9.0e-58 228.0 194 58.8
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 1.2e-57 227.6 201 57.7
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 3.4e-57 226.1 184 60.9
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 4.5e-57 225.7 191 58.6
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 7.6e-57 224.9 207 54.1
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 6.4e-56 221.9 188 58.0
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 8.4e-56 221.5 190 58.9
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 1.1e-55 221.1 207 53.1
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 1.4e-55 220.7 195 55.9
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 1.4e-55 220.7 197 58.4
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 1.4e-55 220.7 188 58.0
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 1.9e-55 220.3 188 57.4
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 2.5e-55 219.9 191 57.1
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 7.1e-55 218.4 197 58.4
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 7.1e-55 218.4 208 54.3
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 2.1e-54 216.9 197 57.9
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 2.5e-52 209.9 202 54.5
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 4.3e-52 209.1 208 52.4
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 3.7e-51 206.1 202 53.5
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 8.2e-51 204.9 197 54.3
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 3.1e-50 203.0 191 55.5
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.0e-49 200.3 198 54.5
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 3.3e-44 183.0 208 47.1
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 5.7e-44 182.2 202 48.5
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 4.2e-39 166.0 145 59.3
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 1.6e-38 164.1 194 50.0
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 3.6e-38 162.9 151 54.3
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.3e-35 154.5 135 58.5
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 5.3e-34 149.1 144 54.2
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.9e-31 140.6 137 53.3
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.2e-30 137.9 200 39.0
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 2.1e-30 137.1 204 39.7
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 1.8e-21 107.5 199 31.7
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 9.7e-20 101.7 190 37.9
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 1.4e-18 97.8 138 39.1
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 8.5e-16 88.6 71 60.6
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.1e-15 88.2 139 38.1
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 1.5e-15 87.8 89 53.9
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 3.2e-15 86.7 63 61.9
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 1.6e-14 84.3 138 34.8
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 1.6e-09 67.8 68 54.4
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 4.5e-09 66.2 68 52.9
Nn3g21845 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.9e-07 60.8 42 69.0


User provided reference genes

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