Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019986 Camellia sinensis var. sinensis HOM05D052299 ORTHO05D043333 6.1e-100 367.5 184 100.0
Actinidia20447 Actinidia chinensis HOM05D000010 ORTHO05D000151 2.9e-57 225.7 183 63.9
Actinidia07125 Actinidia chinensis HOM05D000010 ORTHO05D000151 8.4e-49 197.6 184 56.5
Dinv32765 Davidia involucrata HOM05D000010 ORTHO05D000151 1.4e-43 180.3 184 55.4
Hma1.2p1_1030F.1_g249870 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 1.9e-37 159.8 185 51.9
Lj2C1030T8 Lonicera japonica HOM05D000010 ORTHO05D000151 1.7e-25 120.2 187 43.9
GSVIVG01025165001 Vitis vinifera HOM05D000010 ORTHO05D000151 2.5e-24 116.3 166 42.2
Thecc.09G257900 Theobroma cacao HOM05D000010 ORTHO05D000151 3.7e-20 102.4 175 37.1
TAR633G0201 Trochodendron aralioides HOM05D000010 ORTHO05D000151 4.2e-16 89.0 187 36.9
Glyma.12G171600 Glycine max HOM05D000010 ORTHO05D000151 7.2e-16 88.2 184 37.0
Manes.11G142800 Manihot esculenta HOM05D000010 ORTHO05D000151 2.1e-15 86.7 184 35.9
Ciclev10030252m.g Citrus clementina HOM05D000010 ORTHO05D000151 3.6e-15 85.9 186 35.5
Glyma.13G327600 Glycine max HOM05D000010 ORTHO05D000151 1.8e-14 83.6 183 34.4
COL.COLO4_05427 Corchorus olitorius HOM05D000010 ORTHO05D000151 2.3e-14 83.2 173 33.5
Duzib150G0455 Durio zibethinus HOM05D000010 ORTHO05D000151 3.9e-14 82.4 175 33.1
Haze_23886 Corylus avellana HOM05D000010 ORTHO05D000151 6.7e-14 81.6 185 36.8
Aqoxy4G03248 Aquilegia oxysepala HOM05D028416 ORTHO05D023592 3.3e-13 79.3 175 33.7
Oeu005893.1 Olea europaea HOM05D000010 ORTHO05D000151 1.3e-12 77.4 174 34.5
Cc01_g11320 Coffea canephora HOM05D000010 ORTHO05D000151 2.8e-12 76.3 185 35.1
VMungo1080G0799 Vigna mungo HOM05D000010 ORTHO05D000151 2.8e-12 76.3 184 33.2
Phvul.005G136400 Phaseolus vulgaris HOM05D000010 ORTHO05D000151 1.4e-11 73.9 184 34.2
Duzib168G0481 Durio zibethinus HOM05D000010 ORTHO05D000151 2.4e-11 73.2 176 32.4
FvH4_3g32720 Fragaria vesca HOM05D000010 ORTHO05D000151 2.0e-10 70.1 180 31.7
Lj3g0023792 Lotus japonicus HOM05D000010 ORTHO05D000151 3.5e-10 69.3 182 35.2
FAN21G0584 Fragaria x ananassa HOM05D000010 ORTHO05D000151 5.9e-10 68.6 180 31.1
FAN11G0815 Fragaria x ananassa HOM05D000010 ORTHO05D000151 7.7e-10 68.2 180 32.2
arahy.Tifrunner.gnm1.ann1.JUA047 Arachis hypogaea HOM05D000010 ORTHO05D000151 1.0e-09 67.8 185 31.4
Prupe.6G098600 Prunus persica HOM05D000010 ORTHO05D000151 1.0e-09 67.8 186 31.2
arahy.Tifrunner.gnm1.ann1.TCTP66 Arachis hypogaea HOM05D000010 ORTHO05D000151 2.9e-09 66.2 185 31.4
FAN25G2318 Fragaria x ananassa HOM05D000010 ORTHO05D000151 5.0e-09 65.5 180 30.6
DCAR_006054 Daucus carota HOM05D000010 ORTHO05D000151 5.5e-08 62.0 177 32.2
Cc01_g11350 Coffea canephora HOM05D000010 ORTHO05D000151 7.2e-08 61.6 129 34.1
TWI79G0756 Tripterygium wilfordii HOM05D000010 ORTHO05D000151 9.4e-08 61.2 185 31.4
Ca_01425_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000151 2.1e-07 60.1 179 33.5
CANSAT54G0254 Cannabis sativa HOM05D052299 ORTHO05D043333 8.0e-07 58.2 149 36.2
Dinv35743 Davidia involucrata HOM05D000010 ORTHO05D023592 3.0e-06 56.2 180 26.7


User provided reference genes

Program Settings