Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019964 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.0e-70 268.9 126 100.0
CSS0023154 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.5e-65 252.7 126 96.0
CSS0000056 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.3e-64 247.3 125 94.4
CSS0030235 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.0e-63 243.8 126 93.7
CSS0027143 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.5e-62 241.5 126 92.1
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.8e-58 229.2 116 94.0
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.3e-58 228.8 116 94.0
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.5e-57 226.1 116 93.1
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.4e-56 220.7 116 90.5
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.4e-55 218.8 116 90.5
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-54 216.5 116 89.7
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.5e-44 182.2 116 80.2
CANSAT11G1463 Cannabis sativa HOM05D001309 ORTHO05D000385 7.1e-23 110.9 85 61.2
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 1.6e-22 109.8 85 60.0
CANSAT35G0020 Cannabis sativa HOM05D001309 ORTHO05D000385 4.6e-22 108.2 116 45.7
CANSAT11G0213 Cannabis sativa HOM05D001309 ORTHO05D000385 1.5e-20 103.2 116 45.7
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 5.4e-15 84.7 85 44.7
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.1e-14 82.8 97 43.3
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 1.0e-13 80.5 82 42.7
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-13 80.1 105 41.0
vmacro21586 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.3e-13 80.1 88 47.7
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.3e-13 80.1 88 47.7
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.3e-13 80.1 88 47.7
MBI09_g15192_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.9e-13 78.6 75 42.7
Cpa.g.c35072.1 Carica papaya HOM05D001309 ORTHO05D000385 1.5e-12 76.6 94 41.5
Lj9A299T35 Lonicera japonica HOM05D001309 ORTHO05D000385 1.9e-12 76.3 107 38.3
DCAR_001756 Daucus carota HOM05D001309 ORTHO05D000385 4.3e-12 75.1 78 46.2
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 5.6e-12 74.7 97 37.1
vmacro09403 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.3e-11 73.6 93 41.9
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 3.6e-11 72.0 95 37.9
MBI13_g26301_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.6e-11 72.0 82 40.2
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 4.8e-11 71.6 95 37.9
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 6.2e-11 71.2 78 43.6
vmacro22655 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 8.1e-11 70.9 103 40.8
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 1.4e-10 70.1 95 35.8
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 1.8e-10 69.7 95 36.8
MBI16_g34941_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.1e-10 68.9 95 35.8
MBI19_g12820_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.1e-10 68.9 76 36.8
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.0e-10 68.6 84 35.7
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 6.9e-10 67.8 77 41.6
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 6.9e-10 67.8 77 41.6
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 9.0e-10 67.4 93 37.6
MBI05_g40697_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.0e-10 67.4 97 37.1
Nn3g20149 Nelumbo nucifera HOM05D001309 ORTHO05D000385 9.0e-10 67.4 105 33.3
Lj5A265G37 Lonicera japonica HOM05D005763 ORTHO05D005970 1.2e-09 67.0 102 35.3
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-09 67.0 76 36.8
Ca_04520_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 2.0e-09 66.2 101 32.7
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 2.0e-09 66.2 126 29.4
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 2.0e-09 66.2 126 29.4
PGSC0003DMG400015737 Solanum tuberosum HOM05D001309 ORTHO05D000385 4.5e-09 65.1 78 43.6
Thecc.02G018900 Theobroma cacao HOM05D005763 ORTHO05D005970 4.5e-09 65.1 73 42.5
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 5.8e-09 64.7 73 42.5
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 5.8e-09 64.7 92 40.2
Gohir.A12G105966 Gossypium hirsutum HOM05D040140 ORTHO05D000385 9.9e-09 63.9 108 34.3
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 9.9e-09 63.9 93 36.6
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.9e-09 63.9 75 37.3
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 9.9e-09 63.9 90 36.7
MELO3C027653.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.3e-08 63.5 82 41.5
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 2.2e-08 62.8 117 33.3
MELO3C032241.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.2e-08 62.8 80 42.5
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.2e-08 62.8 108 32.4
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 2.2e-08 62.8 101 33.7
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 2.2e-08 62.8 109 33.0
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 2.9e-08 62.4 98 39.8
MBI08_g25554_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.9e-08 62.4 109 30.3
Dinv05901 Davidia involucrata HOM05D014212 ORTHO05D000385 4.9e-08 61.6 70 42.9
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.4e-08 61.2 85 38.8
Nn3g21442 Nelumbo nucifera HOM05D001309 ORTHO05D000385 6.4e-08 61.2 92 29.3
Hund24527 Selenicereus undatus HOM05D009682 ORTHO05D000385 6.4e-08 61.2 104 34.6
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.4e-08 60.8 79 35.4
AUR62040089 Chenopodium quinoa HOM05D001309 ORTHO05D000385 8.4e-08 60.8 78 41.0
AUR62041672 Chenopodium quinoa HOM05D001309 ORTHO05D000385 8.4e-08 60.8 78 41.0
ECA164G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 8.4e-08 60.8 80 35.0
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.4e-08 60.8 101 29.7
Hund01438 Selenicereus undatus HOM05D004615 ORTHO05D000385 8.4e-08 60.8 78 39.7
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-07 60.5 77 35.1
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-07 60.5 77 35.1
Ca_18931_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 1.1e-07 60.5 101 31.7
Gohir.A01G193333 Gossypium hirsutum HOM05D021375 ORTHO05D022808 1.1e-07 60.5 77 36.4
Hund07865 Selenicereus undatus HOM05D009682 ORTHO05D000385 1.1e-07 60.5 87 35.6
GSVIVG01019142001 Vitis vinifera HOM05D008595 ORTHO05D009597 1.1e-07 60.5 103 34.0
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.4e-07 60.1 79 35.4
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.4e-07 60.1 79 35.4
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.4e-07 60.1 79 35.4
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.4e-07 60.1 79 35.4
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.4e-07 60.1 48 50.0
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-07 60.1 114 32.5
MELO3C028785.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.9e-07 59.7 82 41.5
Lj4g0009512 Lotus japonicus HOM05D001309 ORTHO05D000385 1.9e-07 59.7 89 33.7
MBI01_g25641_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-07 59.7 60 43.3
MBI17_g16204_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-07 59.7 60 43.3
ECA233G0549 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.4e-07 59.3 78 34.6
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.4e-07 59.3 60 43.3
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.4e-07 59.3 53 49.1
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 2.4e-07 59.3 73 39.7
COL.COLO4_06576 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.2e-07 58.9 119 31.1
Lsat_1_v5_gn_9_120321 Lactuca sativa HOM05D005763 ORTHO05D005970 3.2e-07 58.9 111 34.2
Hund24524 Selenicereus undatus HOM05D009682 ORTHO05D000385 3.2e-07 58.9 94 33.0
TAR375G0735 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.2e-07 58.9 66 37.9
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 4.2e-07 58.5 80 33.8
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 4.2e-07 58.5 80 33.8
MELO3C033323.2 Cucumis melo HOM05D000616 ORTHO05D000233 4.2e-07 58.5 105 36.2
ECA238G3595 Erigeron canadensis HOM05D008488 ORTHO05D000385 4.2e-07 58.5 72 40.3
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.1e-07 57.8 79 34.2
Nn1g00481 Nelumbo nucifera HOM05D001309 ORTHO05D000385 7.1e-07 57.8 79 40.5
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 9.3e-07 57.4 105 31.4
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 9.3e-07 57.4 102 32.4
MBI12_g08677_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D000385 9.3e-07 57.4 85 30.6
Medtr5g061300 Medicago truncatula HOM05D004615 ORTHO05D000385 9.3e-07 57.4 105 33.3
PGR083G0420 Punica granatum HOM05D001309 ORTHO05D000385 9.3e-07 57.4 85 32.9
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.2e-06 57.0 102 31.4
ClCG09G008820 Citrullus lanatus HOM05D000539 ORTHO05D000233 1.2e-06 57.0 101 37.6
arahy.Tifrunner.gnm1.ann1.HKAM97 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.6e-06 56.6 84 38.1
AUR62038589 Chenopodium quinoa HOM05D000107 ORTHO05D000233 1.6e-06 56.6 92 35.9
Solyc05g025720.1 Solanum lycopersicum HOM05D063743 ORTHO05D000385 1.6e-06 56.6 93 34.4
CSS0031187 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.1e-06 56.2 75 37.3
Os04g0609900 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 2.1e-06 56.2 66 36.4
Sed0011713 Sechium edule HOM05D000539 ORTHO05D000233 2.1e-06 56.2 88 38.6
Hund03863 Selenicereus undatus HOM05D009682 ORTHO05D000385 2.1e-06 56.2 89 34.8
Nn7g37626 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.7e-06 55.8 82 34.1
Ciclev10007052m.g Citrus clementina HOM05D000616 ORTHO05D000233 3.5e-06 55.5 93 36.6
ECA236G1232 Erigeron canadensis HOM05D008488 ORTHO05D000385 3.5e-06 55.5 72 38.9
COL.COLO4_16333 Corchorus olitorius HOM05D011604 ORTHO05D012513 4.6e-06 55.1 76 30.3
MELO3C029326.2 Cucumis melo HOM05D000539 ORTHO05D000233 4.6e-06 55.1 82 42.7
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 4.6e-06 55.1 94 31.9
Hund13368 Selenicereus undatus HOM05D009682 ORTHO05D000385 4.6e-06 55.1 91 34.1
EL10Ac1g01792 Beta vulgaris HOM05D008595 ORTHO05D010945 6.0e-06 54.7 76 36.8
AUR62036837 Chenopodium quinoa HOM05D009343 ORTHO05D011970 6.0e-06 54.7 75 37.3
AUR62037264 Chenopodium quinoa HOM05D004615 ORTHO05D000062 6.0e-06 54.7 100 34.0
ECA247G2658 Erigeron canadensis HOM05D001309 ORTHO05D000385 6.0e-06 54.7 79 31.6
PSO724G0149 Papaver somniferum HOM05D000616 ORTHO05D000233 6.0e-06 54.7 70 41.4
EL10Ac5g11379 Beta vulgaris HOM05D008595 ORTHO05D010945 7.9e-06 54.3 76 36.8
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 7.9e-06 54.3 77 36.4
Ca_08868_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 7.9e-06 54.3 94 34.0
Ciclev10024574m.g Citrus clementina HOM05D000616 ORTHO05D000233 7.9e-06 54.3 91 36.3
Ciclev10033599m.g Citrus clementina HOM05D000616 ORTHO05D000233 7.9e-06 54.3 91 36.3
ECA096G0001 Erigeron canadensis HOM05D008488 ORTHO05D000385 7.9e-06 54.3 77 33.8
MBI14_g03113_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.9e-06 54.3 60 38.3
Medtr7g027580 Medicago truncatula HOM05D010482 ORTHO05D000385 7.9e-06 54.3 88 33.0


User provided reference genes

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