Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019947 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 5.5e-198 694.1 353 100.0
CSS0045029 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 5.5e-198 694.1 353 100.0
CiPaw.13G165500 Carya illinoinensis HOM05D006024 ORTHO05D007505 2.8e-157 558.9 355 79.7
GSVIVG01025335001 Vitis vinifera HOM05D006024 ORTHO05D007505 1.4e-156 556.6 360 77.2
Nn7g36060 Nelumbo nucifera HOM05D006024 ORTHO05D007505 3.4e-155 552.0 357 76.2
Aqoxy1G00184 Aquilegia oxysepala HOM05D006024 ORTHO05D007505 2.7e-152 542.3 360 75.3
Cfa009695 Carpinus fangiana HOM05D006024 ORTHO05D007505 3.5e-152 542.0 355 77.5
Hma1.2p1_2304F.1_g319350 Hydrangea macrophylla HOM05D006024 ORTHO05D007505 3.5e-152 542.0 359 76.3
Oeu042179.3 Olea europaea HOM05D006024 ORTHO05D007505 7.8e-152 540.8 360 74.7
Cpa.g.sc84.110 Carica papaya HOM05D006024 ORTHO05D007505 1.3e-151 540.0 360 76.7
Cc01_g04140 Coffea canephora HOM05D006024 ORTHO05D007505 1.3e-151 540.0 360 75.3
Eucgr.J00813 Eucalyptus grandis HOM05D006024 ORTHO05D007505 6.6e-151 537.7 360 75.0
PSO339G6331 Papaver somniferum HOM05D006024 ORTHO05D007505 8.6e-151 537.3 361 74.2
PGR119G1295 Punica granatum HOM05D006024 ORTHO05D007505 1.5e-150 536.6 358 76.8
CANSAT54G0336 Cannabis sativa HOM05D006024 ORTHO05D007505 3.3e-150 535.4 355 75.5
Manes.14G014400 Manihot esculenta HOM05D006024 ORTHO05D007505 4.7e-149 531.6 361 75.9
TWI60G1552 Tripterygium wilfordii HOM05D006024 ORTHO05D007505 1.4e-148 530.0 360 75.3
Prupe.6G018500 Prunus persica HOM05D006024 ORTHO05D007505 2.3e-148 529.3 359 74.1
FAN11G3540 Fragaria x ananassa HOM05D006024 ORTHO05D007505 6.8e-148 527.7 357 74.8
Lsat_1_v5_gn_6_50101 Lactuca sativa HOM05D006024 ORTHO05D007505 8.9e-148 527.3 352 74.4
Sopen01g002620 Solanum pennellii HOM05D006024 ORTHO05D007505 8.9e-148 527.3 360 73.1
Atru.chr3.2505 Acer truncatum HOM05D006024 ORTHO05D007505 1.2e-147 526.9 360 74.4
FvH4_3g43551 Fragaria vesca HOM05D006024 ORTHO05D007505 2.0e-147 526.2 360 73.9
HanXRQChr02g0056471 Helianthus annuus HOM05D006024 ORTHO05D007505 2.0e-147 526.2 358 74.9
Solyc01g006630.3 Solanum lycopersicum HOM05D006024 ORTHO05D007505 2.6e-147 525.8 360 72.8
Thecc.09G223300 Theobroma cacao HOM05D006024 ORTHO05D007505 3.4e-147 525.4 360 73.9
MELO3C014640.2 Cucumis melo HOM05D006024 ORTHO05D007505 4.4e-147 525.0 361 74.0
RcHm_v2.0_Chr5g0078111 Rosa chinensis HOM05D006024 ORTHO05D007505 5.8e-147 524.6 360 73.6
Ciclev10015756m.g Citrus clementina HOM05D006024 ORTHO05D007505 9.8e-147 523.9 356 75.0
MD11G1022800 Malus domestica HOM05D006024 ORTHO05D007505 9.8e-147 523.9 356 75.0
Potri.003G210900 Populus trichocarpa HOM05D006024 ORTHO05D007505 9.8e-147 523.9 355 73.5
Potri.T085501 Populus trichocarpa HOM05D006024 ORTHO05D007505 2.2e-146 522.7 356 73.6
DCAR_002037 Daucus carota HOM05D006024 ORTHO05D007505 2.9e-146 522.3 356 72.5
Nitab4.5_0003796g0050 Nicotiana tabacum HOM05D006024 ORTHO05D007505 2.9e-146 522.3 350 75.1
Sed0023125 Sechium edule HOM05D006024 ORTHO05D007505 4.9e-146 521.5 359 73.8
arahy.Tifrunner.gnm1.ann1.7L1RE9 Arachis hypogaea HOM05D006024 ORTHO05D007505 8.3e-146 520.8 354 76.0
CsaV3_4G023790 Cucumis sativus L. HOM05D006024 ORTHO05D007505 8.3e-146 520.8 360 73.6
COL.COLO4_09894 Corchorus olitorius HOM05D006024 ORTHO05D007505 5.4e-145 518.1 354 72.6
Thhalv10021019m.g Eutrema salsugineum HOM05D006024 ORTHO05D007505 9.2e-145 517.3 356 73.9
BcaB06g26149 Brassica carinata HOM05D006024 ORTHO05D007505 1.6e-144 516.5 350 74.0
BcaC05g28281 Brassica carinata HOM05D006024 ORTHO05D007505 2.0e-144 516.2 350 74.3
Lj4g0026168 Lotus japonicus HOM05D006024 ORTHO05D007505 3.5e-144 515.4 359 74.1
Glyma.13G342800 Glycine max HOM05D006024 ORTHO05D007505 6.0e-144 514.6 356 74.4
A05p27990 Brassica napus HOM05D006024 ORTHO05D007505 1.3e-143 513.5 356 73.3
Peaxi162Scf00559g00415 Petunia axillaris HOM05D006024 ORTHO05D007505 1.3e-143 513.5 350 73.7
Lj3g0007180 Lotus japonicus HOM05D006024 ORTHO05D007505 2.3e-143 512.7 359 73.8
AL3G34710 Arabidopsis lyrata HOM05D006024 ORTHO05D007505 3.0e-143 512.3 355 74.1
CARHR096620 Cardamine hirsuta HOM05D006024 ORTHO05D007505 5.0e-143 511.5 355 73.5
THA.LOC104816910 Tarenaya hassleriana HOM05D006024 ORTHO05D007505 6.6e-143 511.1 355 73.8
Dinv36303 Davidia involucrata HOM05D006024 ORTHO05D007505 8.6e-143 510.8 317 80.4
Gorai.010G128200 Gossypium raimondii HOM05D006024 ORTHO05D007505 1.1e-142 510.4 360 73.1
MSTRG.21409 Avicennia marina HOM05D006024 ORTHO05D007505 1.9e-142 509.6 356 72.2
Phvul.005G150400 Phaseolus vulgaris HOM05D006024 ORTHO05D007505 1.9e-142 509.6 359 74.1
QL01p006224 Quercus lobata HOM05D006024 ORTHO05D007505 1.9e-142 509.6 385 69.4
Sp3g18810 Schrenkiella parvula HOM05D006024 ORTHO05D007505 1.9e-142 509.6 356 72.8
AT3G20790 Arabidopsis thaliana HOM05D006024 ORTHO05D007505 2.5e-142 509.2 355 73.2
Gohir.D06G112300 Gossypium hirsutum HOM05D006024 ORTHO05D007505 3.3e-142 508.8 360 72.8
Duzib168G0763 Durio zibethinus HOM05D006024 ORTHO05D007505 9.5e-142 507.3 354 72.3
Carub.0003s2075 Capsella rubella HOM05D006024 ORTHO05D007505 1.6e-141 506.5 355 73.0
vmacro04169 Vaccinium macrocarpon HOM05D006024 ORTHO05D007505 1.4e-140 503.4 474 60.3
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 4.0e-140 501.9 359 73.0
MSTRG.12483 Avicennia marina HOM05D006024 ORTHO05D007505 5.8e-139 498.0 356 71.6
TPR.G18832 Trifolium pratense HOM05D006024 ORTHO05D007505 5.8e-139 498.0 360 72.5
Lalb_Chr24g0396941 Lupinus albus HOM05D006024 ORTHO05D007505 1.3e-138 496.9 356 72.2
Ca_01271_v3 Cicer arietinum L. HOM05D006024 ORTHO05D007505 2.9e-138 495.7 356 72.5
BolC5t33061H Brassica oleracea HOM05D006024 ORTHO05D007505 1.9e-137 493.0 356 71.6
BraA05t21682Z Brassica rapa HOM05D006024 ORTHO05D007505 3.2e-137 492.3 356 71.3
C05p43290 Brassica napus HOM05D006024 ORTHO05D007505 7.1e-137 491.1 356 71.3
AUR62019251 Chenopodium quinoa HOM05D006024 ORTHO05D007505 1.2e-136 490.3 353 70.8
AUR62000078 Chenopodium quinoa HOM05D006024 ORTHO05D007505 1.3e-135 486.9 353 70.5
Medtr2g098500 Medicago truncatula HOM05D006024 ORTHO05D007505 1.3e-135 486.9 357 71.7
FAN11G0987 Fragaria x ananassa HOM05D006024 ORTHO05D007505 8.6e-135 484.2 357 70.3
CAN.G388.68 Capsicum annuum HOM05D006024 ORTHO05D007505 5.6e-134 481.5 388 64.4
Migut.N02293 Erythranthe guttata HOM05D006024 ORTHO05D007505 7.3e-134 481.1 358 69.3
Os09g0280300 Oryza sativa ssp. japonica HOM05D006024 ORTHO05D007505 6.8e-132 474.6 355 66.8
EL10Ac4g10317 Beta vulgaris HOM05D006024 ORTHO05D007505 1.2e-131 473.8 359 67.7
Hund22080 Selenicereus undatus HOM05D006024 ORTHO05D007505 1.5e-131 473.4 354 68.4
Lju1319A3G40 Lonicera japonica HOM05D006024 ORTHO05D007505 2.6e-131 472.6 369 66.7
Lj1A365G18 Lonicera japonica HOM05D006024 ORTHO05D007505 3.8e-130 468.8 373 65.4
Migut.D00559 Erythranthe guttata HOM05D006024 ORTHO05D007505 3.2e-129 465.7 358 68.2
ATR0605G294 Amborella trichopoda HOM05D006024 ORTHO05D007505 9.2e-129 464.2 356 64.6
arahy.Tifrunner.gnm1.ann1.3AB71G Arachis hypogaea HOM05D006024 ORTHO05D007505 9.2e-129 464.2 346 71.1
MBI04_g27131_MAGBIO Magnolia biondii HOM05D006024 ORTHO05D007505 1.7e-127 459.9 354 66.1
Aa31LG8G7600 Aethionema arabicum HOM05D006024 ORTHO05D007505 3.3e-126 455.7 355 68.2
Gohir.A06G108500 Gossypium hirsutum HOM05D006024 ORTHO05D007505 6.9e-124 448.0 359 66.3
VMungo0251G0909 Vigna mungo HOM05D006024 ORTHO05D007505 4.2e-121 438.7 359 64.6
VMungo1080G1390 Vigna mungo HOM05D006024 ORTHO05D007505 2.7e-120 436.0 359 63.5
SGA_v2.0_scaffold1G00800 Striga asiatica HOM05D006024 ORTHO05D007505 2.4e-113 412.9 358 62.0
SEGI_39854 Sequoiadendron giganteum HOM05D006024 ORTHO05D007505 9.3e-113 411.0 353 58.9
Rhsim13G0225400 Rhododendron simsii HOM05D006024 ORTHO05D007505 1.2e-112 410.6 255 79.2
TAR636G0774 Trochodendron aralioides HOM05D006024 ORTHO05D007505 1.2e-104 384.0 264 72.0
unitig_8.g3081 Utricularia gibba HOM05D006024 ORTHO05D007505 1.2e-104 384.0 351 59.0
ECA233G0904 Erigeron canadensis HOM05D006024 ORTHO05D007505 8.7e-103 377.9 254 74.0
Sc06g0004470 Simmondsia chinensis HOM05D006024 ORTHO05D007505 4.3e-102 375.6 255 72.9
Pp3c6_24290 Physcomitrium patens HOM05D006024 ORTHO05D007505 7.9e-96 354.8 350 50.9
Nitab4.5_0008137g0040 Nicotiana tabacum HOM05D006024 ORTHO05D007505 2.8e-93 346.3 349 55.3
Haze_23046 Corylus avellana HOM05D006024 ORTHO05D007505 4.8e-93 345.5 287 63.4
SMO116G0160 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 9.3e-89 331.3 358 49.7
Mapoly0150s0011 Marchantia polymorpha HOM05D006024 ORTHO05D007505 4.6e-88 328.9 356 48.3
Pp3c16_13070 Physcomitrium patens HOM05D006024 ORTHO05D007505 5.1e-87 325.5 374 46.5
AagrBONN_evm.TU.Sc2ySwM_344.3372 Anthoceros agrestis HOM05D006024 ORTHO05D007505 1.3e-82 310.8 354 46.6
SMO146G0097 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 1.4e-81 307.4 341 47.5
ClCG02G023630 Citrullus lanatus HOM05D006024 ORTHO05D007505 5.5e-81 305.4 201 76.6
SMO144G0113 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 1.6e-72 277.3 339 44.0
Zm00001eb094580 Zea mays HOM05D006024 ORTHO05D007505 1.6e-72 277.3 201 66.7
AagrBONN_evm.TU.Sc2ySwM_344.254 Anthoceros agrestis HOM05D006024 ORTHO05D007505 2.3e-71 273.5 354 42.1
Pp3c3_20310 Physcomitrium patens HOM05D006024 ORTHO05D007505 8.8e-71 271.6 353 41.9
Mapoly0033s0066 Marchantia polymorpha HOM05D006024 ORTHO05D007505 1.9e-65 253.8 353 40.5
FAN16G2307 Fragaria x ananassa HOM05D006024 ORTHO05D007505 2.4e-52 210.3 143 74.8
TAR636G1381 Trochodendron aralioides HOM05D006024 ORTHO05D007505 1.1e-44 184.9 182 57.7
HPP92_000457 Vanilla planifolia HOM05D006024 ORTHO05D007505 5.0e-42 176.0 148 62.8
Psat7g086040 Pisum sativum HOM05D006024 ORTHO05D007505 1.8e-36 157.5 236 43.6
Rhsim13G0225300 Rhododendron simsii HOM05D006024 ORTHO05D007505 1.7e-34 151.0 85 85.9
Cre01.g023300 Chlamydomonas reinhardtii HOM05D006024 ORTHO05D007505 5.0e-34 149.4 406 30.3
Sc06g0004480 Simmondsia chinensis HOM05D006024 ORTHO05D007505 2.5e-33 147.1 107 65.4
Psat6g204000 Pisum sativum HOM05D006024 ORTHO05D007505 1.1e-31 141.7 152 54.6
ECA233G1997 Erigeron canadensis HOM05D006024 ORTHO05D007505 1.4e-31 141.4 101 68.3
FAN25G0441 Fragaria x ananassa HOM05D006024 ORTHO05D007505 4.0e-31 139.8 128 57.8
CSS0049558 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 3.4e-30 136.7 88 84.1
CSS0042824 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 9.8e-30 135.2 88 83.0
Psat5g288680 Pisum sativum HOM05D006024 ORTHO05D007505 8.3e-29 132.1 96 68.8
Glyma.15G031500 Glycine max HOM05D006024 ORTHO05D007505 1.9e-28 131.0 133 57.1
Cfa023900 Carpinus fangiana HOM05D006024 ORTHO05D007505 3.2e-28 130.2 361 28.5
Actinidia16298 Actinidia chinensis HOM05D006024 ORTHO05D007505 1.6e-27 127.9 77 81.8
CSS0043067 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 1.2e-24 118.2 97 69.1
Medtr8g016390 Medicago truncatula HOM05D006024 ORTHO05D007505 6.2e-24 115.9 97 63.9
C01p43430 Brassica napus HOM05D006024 ORTHO05D007505 7.1e-20 102.4 99 56.6
BolC1t04302H Brassica oleracea HOM05D006024 ORTHO05D007505 7.1e-20 102.4 99 56.6
Psat5g288640 Pisum sativum HOM05D006024 ORTHO05D007505 1.2e-19 101.7 123 49.6
Oeu037561.1 Olea europaea HOM05D006024 ORTHO05D007505 1.3e-13 81.6 51 74.5
BcaC09g49021 Brassica carinata HOM05D006024 ORTHO05D007505 9.2e-12 75.5 87 52.9


User provided reference genes

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