Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 0.0e+00 1370.9 716 100.0
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 2.4e-256 889.0 721 71.3
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 2.4e-256 889.0 721 71.3
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 6.9e-256 887.5 707 71.1
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 1.5e-255 886.3 720 70.7
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 8.5e-222 774.2 707 64.9
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 3.2e-213 745.7 742 59.8
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 1.2e-212 743.8 713 64.9
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 1.2e-204 717.2 711 59.1
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 6.1e-204 714.9 699 59.4
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 1.4e-203 713.8 696 59.6
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 3.0e-203 712.6 715 60.1
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 5.2e-203 711.8 650 61.8
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 2.2e-201 706.4 720 57.8
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 9.1e-200 701.0 712 58.7
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 7.7e-199 698.0 707 59.7
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 2.9e-198 696.0 683 61.3
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 1.1e-197 694.1 712 57.9
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 5.5e-197 691.8 729 57.3
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 4.7e-196 688.7 713 59.7
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 4.0e-195 685.6 693 59.0
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 8.8e-195 684.5 723 57.8
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 2.6e-194 682.9 680 59.7
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 3.4e-194 682.6 693 58.7
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 4.4e-194 682.2 701 58.8
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 7.5e-194 681.4 717 58.0
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 1.7e-193 680.2 675 60.1
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 2.2e-193 679.9 718 58.8
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 2.8e-193 679.5 672 60.0
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 4.8e-193 678.7 669 58.9
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.8e-192 676.8 729 56.8
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.8e-192 676.8 682 59.7
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 3.1e-192 676.0 670 59.6
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 5.4e-192 675.2 635 60.9
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 2.2e-190 669.8 709 58.5
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 5.5e-189 665.2 712 57.2
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 2.7e-188 662.9 705 57.9
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 1.5e-186 657.1 709 55.9
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 2.0e-186 656.8 710 57.6
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 2.6e-186 656.4 710 57.9
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 3.4e-186 656.0 707 55.9
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 2.2e-185 653.3 719 57.0
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 3.1e-184 649.4 730 54.4
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 2.7e-183 646.4 722 55.4
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 3.5e-183 646.0 672 57.3
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 5.0e-182 642.1 710 56.9
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 1.5e-181 640.6 711 56.4
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 1.6e-180 637.1 672 57.1
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 1.0e-179 634.4 666 57.4
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 1.8e-179 633.6 709 56.0
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 2.3e-179 633.3 697 56.1
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 6.8e-179 631.7 682 57.3
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 7.5e-178 628.2 649 56.7
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 4.9e-177 625.5 678 56.6
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 4.9e-177 625.5 714 54.6
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 6.4e-177 625.2 712 54.2
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 3.2e-176 622.9 737 51.8
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 4.1e-176 622.5 702 54.3
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 2.0e-175 620.2 642 56.2
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 6.6e-174 615.1 686 55.7
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 8.6e-174 614.8 677 55.1
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 1.6e-172 610.5 714 54.2
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 3.1e-171 606.3 700 54.3
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 1.4e-168 597.4 651 55.5
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 1.4e-168 597.4 630 56.0
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 7.0e-168 595.1 617 57.4
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 1.2e-167 594.3 617 56.9
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 8.6e-166 588.2 637 55.6
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 1.6e-164 583.9 784 48.5
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 2.1e-164 583.6 720 52.1
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 1.8e-163 580.5 727 52.3
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 3.4e-162 576.2 672 52.2
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.7e-161 573.9 701 52.5
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 9.2e-160 568.2 710 52.1
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 6.0e-159 565.5 595 58.0
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 1.7e-158 563.9 738 49.9
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 2.1e-156 557.0 710 50.3
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 4.0e-155 552.7 565 59.5
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 1.1e-152 544.7 727 50.2
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 4.1e-152 542.7 706 49.4
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 5.4e-152 542.3 735 50.1
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.2e-151 541.2 703 50.8
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 7.8e-151 538.5 601 55.4
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 3.8e-145 519.6 547 57.4
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 3.2e-144 516.5 650 50.3
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 4.6e-143 512.7 559 56.0
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 4.0e-139 499.6 583 56.3
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 9.6e-133 478.4 744 46.0
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 3.6e-132 476.5 638 49.1
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 9.0e-131 471.9 663 46.3
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 2.9e-129 466.8 665 47.8
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 4.9e-129 466.1 717 45.0
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 7.1e-128 462.2 539 52.9
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 4.6e-127 459.5 775 44.0
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 5.1e-126 456.1 674 45.7
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 6.2e-124 449.1 660 46.4
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 2.4e-123 447.2 717 44.6
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 4.0e-123 446.4 712 45.4
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 1.4e-120 438.0 658 45.1
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 1.6e-119 434.5 589 47.9
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 1.3e-113 414.8 634 47.5
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 6.5e-113 412.5 663 44.3
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 6.5e-113 412.5 663 44.3
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 8.5e-113 412.1 501 54.1
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 1.0e-110 405.2 421 59.1
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 6.7e-110 402.5 656 44.1
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 6.7e-110 402.5 595 44.0
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 5.7e-109 399.4 778 40.2
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 5.9e-106 389.4 518 48.8
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 3.3e-101 373.6 621 44.0
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 8.5e-97 359.0 703 41.4
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 8.5e-89 332.4 624 42.3
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 3.2e-88 330.5 305 60.3
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 1.5e-85 321.6 497 45.9
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 2.9e-81 307.4 511 43.8
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 5.5e-80 303.1 212 75.5
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 2.9e-73 280.8 266 57.5
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 2.1e-63 248.1 199 61.3
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 4.1e-51 207.2 216 48.6
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 2.0e-50 204.9 470 34.3
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 1.7e-49 201.8 298 47.3
Mapoly0096s0071 Marchantia polymorpha HOM05D004806 ORTHO05D005397 3.3e-48 197.6 487 32.4
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 1.2e-45 189.1 147 70.7
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 1.3e-44 185.7 172 62.2
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 4.1e-43 180.6 210 53.3
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 4.6e-42 177.2 174 58.6
CBR_g37391 Chara braunii HOM05D004806 ORTHO05D005397 3.0e-41 174.5 209 42.1
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 1.1e-40 172.6 138 68.1
BcaB02g09066 Brassica carinata HOM05D004806 ORTHO05D005397 9.5e-40 169.5 222 47.3
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 1.5e-37 162.2 135 63.7
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 2.0e-37 161.8 113 69.9
SMO358G0301 Selaginella moellendorffii HOM05D004806 ORTHO05D005397 1.0e-33 149.4 427 33.5
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 2.8e-31 141.4 181 50.3
SHI03526 Sapria himalayana HOM05D004806 ORTHO05D005397 5.8e-29 133.7 146 52.1
Haze_17183 Corylus avellana HOM05D004806 ORTHO05D005397 1.1e-24 119.4 84 73.8
Os07g0100500 Oryza sativa ssp. japonica HOM05D004806 ORTHO05D005397 2.1e-23 115.2 74 68.9
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 4.8e-23 114.0 184 44.0
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis HOM05D004806 ORTHO05D005397 2.6e-21 108.2 447 28.9
SalBow6G4818 Salvia bowleyana HOM05D004806 ORTHO05D005397 4.3e-16 90.9 133 47.4
Oeu059752.1 Olea europaea HOM05D004806 ORTHO05D005397 6.2e-15 87.0 138 44.9
ATR0723G011 Amborella trichopoda HOM05D004806 ORTHO05D005397 1.4e-14 85.9 72 54.2
RcHm_v2.0_Chr1g0313541 Rosa chinensis HOM05D004806 ORTHO05D005397 1.4e-14 85.9 62 67.7
Zm00001eb057510 Zea mays HOM05D004806 ORTHO05D005397 5.3e-14 84.0 72 50.0
CAN.G853.43 Capsicum annuum HOM05D004806 ORTHO05D005397 3.2e-11 74.7 67 62.7
Pp3c26_8620 Physcomitrium patens HOM05D004806 ORTHO05D005397 9.3e-11 73.2 120 35.8
Oeu043075.1 Olea europaea HOM05D004806 ORTHO05D005397 1.2e-10 72.8 133 42.9
Oeu021121.1 Olea europaea HOM05D004806 ORTHO05D005397 5.1e-09 67.4 42 73.8
SalBow2G3552 Salvia bowleyana HOM05D034888 ORTHO05D005397 2.5e-08 65.1 57 61.4
Oeu061605.1 Olea europaea HOM05D004806 ORTHO05D005397 3.7e-07 61.2 55 50.9
MD12G1168400 Malus domestica HOM05D004806 ORTHO05D005397 1.1e-06 59.7 28 96.4
Ah.05g175410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 3.1e-06 58.2 55 56.4


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