Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 1.5e-70 269.6 156 100.0
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 1.6e-53 213.0 158 81.6
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 8.1e-53 210.7 161 79.5
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 1.1e-52 210.3 159 79.2
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 1.2e-51 206.8 159 78.0
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.2e-51 206.8 160 79.4
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 2.6e-51 205.7 158 75.9
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 2.6e-51 205.7 160 78.8
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 7.6e-51 204.1 157 75.8
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 7.6e-51 204.1 160 79.4
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 3.8e-50 201.8 157 75.8
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 8.4e-50 200.7 157 77.1
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 8.4e-50 200.7 160 76.9
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 1.4e-49 199.9 158 78.5
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 1.4e-49 199.9 157 75.2
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 1.4e-49 199.9 161 77.6
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 1.9e-49 199.5 148 77.0
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 2.4e-49 199.1 160 75.6
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 3.2e-49 198.7 150 79.3
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 4.2e-49 198.4 157 75.2
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 4.2e-49 198.4 157 77.1
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 7.1e-49 197.6 159 78.6
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 9.3e-49 197.2 168 74.4
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.2e-48 196.8 161 76.4
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 1.2e-48 196.8 157 77.1
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 1.6e-48 196.4 148 79.7
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 2.1e-48 196.1 159 78.0
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 2.1e-48 196.1 162 77.2
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 4.6e-48 194.9 165 72.7
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 6.0e-48 194.5 154 79.2
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 1.0e-47 193.7 154 74.7
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 1.8e-47 193.0 166 73.5
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 1.1e-46 190.3 150 78.0
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 1.9e-46 189.5 160 75.6
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 2.5e-46 189.1 158 75.3
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 2.5e-46 189.1 159 74.8
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 3.3e-46 188.7 157 76.4
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 5.6e-46 188.0 148 77.7
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 5.6e-46 188.0 158 74.7
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 2.8e-45 185.7 153 79.1
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 6.2e-45 184.5 149 75.8
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 6.2e-45 184.5 160 74.4
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 6.2e-45 184.5 159 73.0
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 8.2e-45 184.1 151 76.8
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 8.2e-45 184.1 161 73.9
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 1.4e-44 183.3 149 79.9
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 3.1e-44 182.2 151 74.8
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 3.1e-44 182.2 160 73.1
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 4.0e-44 181.8 160 73.8
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 5.3e-44 181.4 196 62.8
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 5.3e-44 181.4 149 79.2
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 1.2e-43 180.3 147 75.5
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 1.2e-43 180.3 150 76.7
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 2.0e-43 179.5 132 79.5
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 2.6e-43 179.1 149 76.5
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 2.6e-43 179.1 145 77.2
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 4.5e-43 178.3 149 77.9
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 1.3e-42 176.8 150 78.0
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 1.3e-42 176.8 150 76.0
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 2.2e-42 176.0 150 76.0
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 4.9e-42 174.9 153 74.5
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 6.5e-42 174.5 149 77.9
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 1.1e-41 173.7 154 75.3
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 1.9e-41 172.9 151 74.2
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 3.2e-41 172.2 199 60.8
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 5.5e-41 171.4 152 71.7
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 9.3e-41 170.6 152 71.1
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 1.2e-40 170.2 156 69.9
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 6.0e-40 167.9 149 74.5
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 3.9e-39 165.2 160 68.8
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 6.7e-39 164.5 151 70.9
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 1.1e-38 163.7 150 73.3
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 1.1e-38 163.7 151 72.2
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 1.5e-38 163.3 150 70.7
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 1.9e-38 162.9 143 74.1
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 1.9e-38 162.9 143 74.1
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 1.9e-38 162.9 124 79.0
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 3.3e-38 162.2 193 50.3
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.6e-37 159.8 126 78.6
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 2.2e-37 159.5 160 67.5
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 4.8e-37 158.3 161 64.6
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 3.1e-36 155.6 142 72.5
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 4.1e-36 155.2 142 72.5
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 4.1e-36 155.2 142 71.8
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 9.0e-36 154.1 142 72.5
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 9.0e-36 154.1 158 68.4
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 6.5e-34 147.9 150 68.0
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 2.7e-32 142.5 129 65.1
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 1.0e-31 140.6 171 52.0
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 3.0e-31 139.0 185 47.0
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 9.7e-30 134.0 141 63.1
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.3e-29 133.7 106 65.1
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.3e-29 133.7 115 68.7
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 4.8e-29 131.7 115 66.1
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 6.3e-29 131.3 104 72.1
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 1.4e-28 130.2 154 51.3
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 2.4e-28 129.4 146 63.7
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 3.1e-28 129.0 111 71.2
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 3.8e-26 122.1 123 57.7
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 6.5e-26 121.3 124 62.1
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 1.1e-25 120.6 138 53.6
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 4.1e-20 102.1 98 61.2
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 4.2e-17 92.0 93 54.8
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 1.0e-15 87.4 99 49.5
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 3.3e-14 82.4 151 40.4
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 2.4e-12 76.3 100 50.0
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 2.7e-08 62.8 67 55.2
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 8.0e-08 61.2 60 51.7
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 1.0e-07 60.8 96 37.5
FAN27G0088 Fragaria x ananassa HOM05D007166 ORTHO05D009039 6.7e-07 58.2 55 58.2


User provided reference genes

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