Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019882 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 7.5e-50 200.3 106 100.0
CSS0041034 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.1e-40 168.3 106 85.8
CSS0028860 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.2e-39 166.4 109 84.4
CSS0031893 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.6e-39 166.0 107 84.1
CSS0036875 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.1e-37 159.8 106 84.0
CSS0018183 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.0e-35 153.3 112 77.7
CSS0009256 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.0e-30 136.7 74 97.3
CSS0048440 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.0e-30 134.4 106 71.7
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.0e-30 134.4 74 94.6
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.6e-28 129.4 74 91.9
CSS0049883 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.8e-27 125.9 74 89.2
CSS0037647 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.9e-24 115.9 66 92.4
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 1.7e-17 92.8 74 62.2
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 5.1e-14 81.3 75 64.0
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 2.8e-12 75.5 77 59.7
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 8.9e-11 70.5 75 57.3
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 3.4e-10 68.6 77 50.6
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 7.6e-10 67.4 58 58.6
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 9.9e-10 67.0 75 52.0
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 9.9e-10 67.0 75 53.3
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 4.9e-09 64.7 76 53.9
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 8.4e-09 63.9 59 52.5
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 8.4e-09 63.9 74 51.4
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 1.9e-08 62.8 75 50.7
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 2.4e-08 62.4 57 56.1
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 2.4e-08 62.4 57 57.9
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 4.1e-08 61.6 76 52.6
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 7.1e-08 60.8 57 56.1
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 7.1e-08 60.8 78 52.6
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 2.1e-07 59.3 83 44.6
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 3.5e-07 58.5 80 45.0
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 6.0e-07 57.8 44 61.4
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 6.0e-07 57.8 44 61.4
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 6.0e-07 57.8 78 48.7
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 1.3e-06 56.6 60 50.0
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 1.7e-06 56.2 73 43.8
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 2.3e-06 55.8 77 45.5
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 3.0e-06 55.5 77 42.9
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 3.9e-06 55.1 44 59.1
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 5.1e-06 54.7 63 49.2


User provided reference genes

Program Settings