Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019859 Camellia sinensis var. sinensis HOM05D007435 ORTHO05D009338 4.3e-69 264.6 141 100.0
Actinidia21528 Actinidia chinensis HOM05D007435 ORTHO05D009338 6.3e-36 154.5 139 62.6
Actinidia02252 Actinidia chinensis HOM05D007435 ORTHO05D009338 3.1e-35 152.1 142 62.7
Rhsim05G0126700 Rhododendron simsii HOM05D007435 ORTHO05D009338 1.4e-32 143.3 139 61.2
Dinv32059 Davidia involucrata HOM05D007435 ORTHO05D009338 3.7e-28 128.6 137 56.2
Dinv03572 Davidia involucrata HOM05D007435 ORTHO05D009338 8.2e-28 127.5 96 66.7
Dinv05039 Davidia involucrata HOM05D007435 ORTHO05D009338 8.2e-28 127.5 96 66.7
Prupe.2G027100 Prunus persica HOM05D007435 ORTHO05D009338 5.9e-26 121.3 114 59.6
MD07G1027000 Malus domestica HOM05D007435 ORTHO05D009338 2.2e-25 119.4 110 61.8
TAR065G0004 Trochodendron aralioides HOM05D007435 ORTHO05D009338 2.2e-25 119.4 133 53.4
FvH4_7g02100 Fragaria vesca HOM05D007435 ORTHO05D009338 6.5e-25 117.9 105 64.8
TAR369G0027 Trochodendron aralioides HOM05D007435 ORTHO05D009338 6.5e-25 117.9 93 65.6
RcHm_v2.0_Chr1g0319401 Rosa chinensis HOM05D007435 ORTHO05D009338 8.5e-25 117.5 125 57.6
Solyc01g068190.3 Solanum lycopersicum HOM05D007435 ORTHO05D009338 3.2e-24 115.5 107 58.9
Sopen01g030130 Solanum pennellii HOM05D007435 ORTHO05D009338 3.2e-24 115.5 107 58.9
DCAR_009211 Daucus carota HOM05D007435 ORTHO05D009338 5.5e-24 114.8 94 66.0
Nitab4.5_0001775g0080 Nicotiana tabacum HOM05D007435 ORTHO05D009338 5.5e-24 114.8 140 51.4
FAN03G1772 Fragaria x ananassa HOM05D007435 ORTHO05D009338 1.2e-23 113.6 85 71.8
PGSC0003DMG401006753 Solanum tuberosum HOM05D007435 ORTHO05D009338 1.2e-23 113.6 96 62.5
Nitab4.5_0000316g0230 Nicotiana tabacum HOM05D002000 ORTHO05D002027 6.1e-23 111.3 140 50.7
MD02G1297000 Malus domestica HOM05D007435 ORTHO05D009338 7.9e-23 110.9 88 67.0
Cpa.g.sc197.17 Carica papaya HOM05D007435 ORTHO05D009338 1.0e-22 110.5 120 53.3
SGA_v2.0_scaffold354G49740 Striga asiatica HOM05D007435 ORTHO05D009338 3.0e-22 109.0 139 48.9
Lsat_1_v5_gn_1_100400 Lactuca sativa HOM05D007435 ORTHO05D009338 3.9e-22 108.6 90 63.3
Thecc.10G004500 Theobroma cacao HOM05D007435 ORTHO05D009338 5.1e-22 108.2 93 62.4
Manes.11G002100 Manihot esculenta HOM05D007435 ORTHO05D009338 1.1e-21 107.1 106 59.4
Nn7g36439 Nelumbo nucifera HOM05D007435 ORTHO05D009338 2.6e-21 105.9 90 62.2
Hma1.2p1_0269F.1_g107800 Hydrangea macrophylla HOM05D007435 ORTHO05D009338 5.7e-21 104.8 201 39.3
ClCG01G007560 Citrullus lanatus HOM05D007435 ORTHO05D009338 7.4e-21 104.4 122 52.5
Eucgr.G03266 Eucalyptus grandis HOM05D007435 ORTHO05D009338 7.4e-21 104.4 131 48.9
COL.COLO4_19345 Corchorus olitorius HOM05D007435 ORTHO05D009338 9.7e-21 104.0 132 49.2
Haze_03106 Corylus avellana HOM05D007435 ORTHO05D009338 1.3e-20 103.6 129 48.1
Peaxi162Scf00087g00129 Petunia axillaris HOM05D007435 ORTHO05D009338 1.3e-20 103.6 88 61.4
Lj3g0014273 Lotus japonicus HOM05D007435 ORTHO05D009338 3.7e-20 102.1 130 49.2
CANSAT80G0490 Cannabis sativa HOM05D007435 ORTHO05D009338 8.2e-20 100.9 144 45.1
CsaV3_5G024570 Cucumis sativus L. HOM05D007435 ORTHO05D009338 8.2e-20 100.9 122 52.5
HanXRQChr01g0020861 Helianthus annuus HOM05D007435 ORTHO05D009338 8.2e-20 100.9 88 61.4
SalBow6G1324 Salvia bowleyana HOM05D007435 ORTHO05D009338 8.2e-20 100.9 139 47.5
TWI63G0886 Tripterygium wilfordii HOM05D007435 ORTHO05D009338 2.4e-19 99.4 148 48.0
CiPaw.13G009600 Carya illinoinensis HOM05D007435 ORTHO05D009338 3.1e-19 99.0 106 51.9
PSO339G5565 Papaver somniferum HOM05D007435 ORTHO05D009338 3.1e-19 99.0 126 46.8
Cfa010840 Carpinus fangiana HOM05D007435 ORTHO05D009338 6.9e-19 97.8 129 47.3
AUR62026808 Chenopodium quinoa HOM05D007435 ORTHO05D009338 6.9e-19 97.8 93 58.1
MELO3C005141.2 Cucumis melo HOM05D007435 ORTHO05D009338 6.9e-19 97.8 122 50.8
Ah.10g030920 Amaranthus hybridus HOM05D007435 ORTHO05D009338 1.2e-18 97.1 130 50.8
Aa31LG2G18760 Aethionema arabicum HOM05D007435 ORTHO05D009338 2.0e-18 96.3 96 53.1
unitig_578.g16053 Utricularia gibba HOM05D007435 ORTHO05D009338 2.0e-18 96.3 90 60.0
Sed0015818 Sechium edule HOM05D007435 ORTHO05D009338 2.6e-18 95.9 113 53.1
AUR62037244 Chenopodium quinoa HOM05D007435 ORTHO05D009338 3.4e-18 95.5 92 57.6
ECA248G3437 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.5e-18 95.1 140 47.1
MBI13_g04786_MAGBIO Magnolia biondii HOM05D007435 ORTHO05D009338 7.7e-18 94.4 122 50.8
Duzib128G0703 Durio zibethinus HOM05D007435 ORTHO05D009338 1.0e-17 94.0 93 57.0
Sc10g0004150 Simmondsia chinensis HOM05D007435 ORTHO05D009338 1.3e-17 93.6 108 47.2
Migut.N01821 Erythranthe guttata HOM05D007435 ORTHO05D009338 2.9e-17 92.4 94 50.0
Duzib114G0226 Durio zibethinus HOM05D007435 ORTHO05D009338 1.1e-16 90.5 136 47.1
ATR0006G035 Amborella trichopoda HOM05D007435 ORTHO05D009338 3.2e-16 89.0 94 55.3
vmacro19756 Vaccinium macrocarpon HOM05D007435 ORTHO05D009338 3.2e-16 89.0 101 56.4
AL343U10010 Arabidopsis lyrata HOM05D007435 ORTHO05D009338 5.5e-16 88.2 96 49.0
Gohir.D10G251200 Gossypium hirsutum HOM05D007435 ORTHO05D009338 7.2e-16 87.8 90 54.4
Gorai.011G291600 Gossypium raimondii HOM05D007435 ORTHO05D009338 7.2e-16 87.8 90 54.4
AT4G31560 Arabidopsis thaliana HOM05D007435 ORTHO05D009338 9.4e-16 87.4 119 44.5
Carub.0007s0901 Capsella rubella HOM05D007435 ORTHO05D009338 9.4e-16 87.4 124 40.3
Gohir.A10G239300 Gossypium hirsutum HOM05D007435 ORTHO05D009338 9.4e-16 87.4 91 53.8
A01p06670 Brassica napus HOM05D005366 ORTHO05D006323 1.2e-15 87.0 97 47.4
Psat5g213320 Pisum sativum HOM05D007435 ORTHO05D009338 2.1e-15 86.3 127 43.3
BraA01t00625Z Brassica rapa HOM05D005366 ORTHO05D006323 3.6e-15 85.5 96 46.9
C07p58750 Brassica napus HOM05D007435 ORTHO05D009338 1.0e-14 84.0 96 47.9
BolC7t46323H Brassica oleracea HOM05D007435 ORTHO05D009338 1.0e-14 84.0 96 47.9
Medtr3g023160 Medicago truncatula HOM05D007435 ORTHO05D009338 1.0e-14 84.0 127 47.2
BcaNung01514 Brassica carinata HOM05D007435 ORTHO05D009338 1.4e-14 83.6 96 46.9
C01p07440 Brassica napus HOM05D007435 ORTHO05D009338 1.4e-14 83.6 109 44.0
BolC1t00726H Brassica oleracea HOM05D007435 ORTHO05D009338 1.4e-14 83.6 109 44.0
Glyma.11G149600 Glycine max HOM05D007435 ORTHO05D009338 1.8e-14 83.2 137 42.3
Thhalv10026511m.g Eutrema salsugineum HOM05D007435 ORTHO05D009338 2.3e-14 82.8 96 45.8
CARHR239440 Cardamine hirsuta HOM05D007435 ORTHO05D009338 3.0e-14 82.4 96 46.9
Potri.001G022500 Populus trichocarpa HOM05D007435 ORTHO05D009338 3.0e-14 82.4 157 44.6
Sp7g29390 Schrenkiella parvula HOM05D007435 ORTHO05D009338 3.0e-14 82.4 98 46.9
BcaC09g51937 Brassica carinata HOM05D007435 ORTHO05D009338 3.9e-14 82.0 108 43.5
Lalb_Chr25g0282731 Lupinus albus HOM05D007435 ORTHO05D009338 3.9e-14 82.0 153 39.2
PGR031G0502 Punica granatum HOM05D007435 ORTHO05D009338 3.9e-14 82.0 115 47.0
QL04p012434 Quercus lobata HOM05D007435 ORTHO05D009338 5.2e-14 81.6 153 39.9
QL04p013057 Quercus lobata HOM05D007435 ORTHO05D009338 6.7e-14 81.3 119 42.9
BcaNung04129 Brassica carinata HOM05D007435 ORTHO05D009338 1.1e-13 80.5 96 45.8
A03p60860 Brassica napus HOM05D007435 ORTHO05D009338 2.0e-13 79.7 96 44.8
BraA03t15122Z Brassica rapa HOM05D007435 ORTHO05D009338 2.0e-13 79.7 96 44.8
CDE08G0963 Ceratophyllum demersum HOM05D000584 ORTHO05D009338 4.4e-13 78.6 138 43.5
arahy.Tifrunner.gnm1.ann1.4Y0UDN Arachis hypogaea HOM05D007435 ORTHO05D009338 5.7e-13 78.2 133 42.9
CDE06G1029 Ceratophyllum demersum HOM05D007435 ORTHO05D009338 5.7e-13 78.2 84 50.0
THA.LOC104826709 Tarenaya hassleriana HOM05D007435 ORTHO05D009338 1.7e-12 76.6 140 38.6
Ciclev10032994m.g Citrus clementina HOM05D007435 ORTHO05D009338 2.2e-12 76.3 97 48.5
Zm00001eb363190 Zea mays HOM05D007435 ORTHO05D009338 1.1e-11 73.9 119 46.2
Atru.chr11.2511 Acer truncatum HOM05D007435 ORTHO05D009338 1.2e-10 70.5 132 40.9
Hund13323 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.2e-10 70.5 52 67.3
Ca_27018_v3 Cicer arietinum L. HOM05D007435 ORTHO05D009338 2.0e-10 69.7 81 49.4
Aqoxy1G00332 Aquilegia oxysepala HOM05D007435 ORTHO05D009338 2.6e-10 69.3 76 53.9
arahy.Tifrunner.gnm1.ann1.KRJM02 Arachis hypogaea HOM05D007435 ORTHO05D009338 2.6e-10 69.3 137 40.1
Phvul.005G033400 Phaseolus vulgaris HOM05D007435 ORTHO05D009338 2.6e-10 69.3 111 44.1
Os01g0940600 Oryza sativa ssp. japonica HOM05D007435 ORTHO05D009338 1.3e-09 67.0 93 46.2
Sabra01G0016900 Salix brachista HOM05D007435 ORTHO05D009338 1.7e-09 66.6 83 48.2
VMungo1080G0635 Vigna mungo HOM05D007435 ORTHO05D009338 6.5e-09 64.7 114 40.4
Haze_19805 Corylus avellana HOM05D007435 ORTHO05D009338 4.2e-08 62.0 77 49.4
Zm00001eb141550 Zea mays HOM05D007435 ORTHO05D009338 4.2e-08 62.0 111 43.2
HPP92_025000 Vanilla planifolia HOM05D007435 ORTHO05D009338 2.1e-07 59.7 107 39.3


User provided reference genes

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