Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.0e-179 631.7 316 100.0
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 6.5e-150 534.3 282 95.7
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 6.9e-67 258.5 244 61.5
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 9.0e-67 258.1 233 62.7
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.7e-63 246.5 139 91.4
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.7e-60 236.1 142 87.3
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 2.4e-59 233.4 231 58.0
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 5.3e-59 232.3 225 61.3
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 1.2e-58 231.1 230 59.1
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 1.4e-56 224.2 204 60.3
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 1.9e-56 223.8 234 60.7
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 9.3e-56 221.5 202 60.9
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 2.7e-55 219.9 206 63.1
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 7.9e-55 218.4 241 55.2
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 1.0e-54 218.0 222 58.1
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 8.7e-54 214.9 223 56.5
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 8.7e-54 214.9 203 57.1
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 1.9e-53 213.8 220 55.5
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.9e-53 213.8 233 53.6
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 4.3e-53 212.6 228 54.4
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 5.7e-53 212.2 203 58.6
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 9.7e-53 211.5 233 53.2
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 9.7e-53 211.5 236 53.0
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 9.7e-53 211.5 217 55.3
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.2e-52 210.3 229 53.3
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 2.8e-52 209.9 198 60.1
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 3.7e-52 209.5 208 58.2
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 4.8e-52 209.1 240 51.7
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 4.8e-52 209.1 239 54.8
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 6.3e-52 208.8 224 54.5
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 6.3e-52 208.8 220 56.4
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 8.2e-52 208.4 218 56.4
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 1.4e-51 207.6 227 54.2
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 1.4e-51 207.6 197 60.9
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 1.4e-51 207.6 227 54.6
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 1.8e-51 207.2 206 57.8
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 1.8e-51 207.2 230 52.6
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 2.4e-51 206.8 206 57.8
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 3.1e-51 206.5 206 56.8
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 3.1e-51 206.5 207 57.0
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 5.3e-51 205.7 206 57.3
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 6.9e-51 205.3 216 55.1
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.2e-50 204.5 251 50.2
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 1.2e-50 204.5 251 50.2
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 1.2e-50 204.5 209 54.5
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.5e-50 204.1 196 59.2
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.5e-50 204.1 202 57.4
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 2.0e-50 203.8 202 57.9
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 2.6e-50 203.4 200 57.0
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 5.9e-50 202.2 230 54.8
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 5.9e-50 202.2 190 59.5
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 5.9e-50 202.2 221 51.6
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 5.9e-50 202.2 209 57.9
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.0e-49 201.4 233 52.4
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 1.0e-49 201.4 192 58.9
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 2.9e-49 199.9 186 61.3
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 3.8e-49 199.5 200 56.0
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.4e-48 197.6 203 57.1
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 1.4e-48 197.6 214 53.7
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.9e-48 197.2 225 52.9
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 4.2e-48 196.1 192 59.4
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 1.2e-47 194.5 213 54.5
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 1.2e-47 194.5 196 58.7
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 1.2e-47 194.5 246 52.4
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 2.7e-47 193.4 203 55.7
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 2.7e-47 193.4 226 52.7
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 2.7e-47 193.4 195 56.4
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 4.6e-47 192.6 199 55.8
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 4.6e-47 192.6 194 56.2
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 2.3e-46 190.3 196 53.6
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 3.0e-46 189.9 232 50.0
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 1.1e-45 188.0 195 56.9
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 3.3e-45 186.4 203 52.7
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 4.3e-45 186.0 203 52.7
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 5.7e-45 185.7 204 53.4
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 7.4e-45 185.3 197 53.3
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 7.4e-45 185.3 210 54.3
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 9.7e-45 184.9 219 51.1
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 1.7e-44 184.1 199 53.8
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 2.8e-44 183.3 219 51.1
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 3.7e-44 183.0 201 55.7
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 1.4e-43 181.0 221 48.9
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 2.4e-43 180.3 188 57.4
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 2.4e-43 180.3 128 72.7
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 2.4e-43 180.3 241 51.5
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 3.1e-43 179.9 219 50.2
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 3.1e-43 179.9 142 69.7
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 1.2e-42 177.9 108 79.6
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 5.0e-41 172.6 203 52.2
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.4e-40 171.0 186 56.5
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 2.5e-40 170.2 108 81.5
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.6e-39 167.5 186 55.4
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 4.7e-39 166.0 105 78.1
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 1.4e-38 164.5 203 49.3
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 3.0e-38 163.3 155 58.7
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 3.3e-37 159.8 105 75.2
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 3.3e-37 159.8 138 61.6
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 6.1e-31 139.0 102 65.7
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 5.7e-29 132.5 193 46.1
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 7.4e-29 132.1 114 64.0
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 3.1e-27 126.7 147 54.4
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 3.2e-24 116.7 205 42.9
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 2.7e-23 113.6 134 55.2
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 2.6e-21 107.1 73 69.9
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 1.7e-20 104.4 193 39.4
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 1.6e-18 97.8 177 40.1
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 2.7e-18 97.1 128 52.3
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 1.3e-17 94.7 139 43.9
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.1e-16 91.7 170 37.6
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 3.6e-15 86.7 58 70.7
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 3.6e-15 86.7 49 79.6
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 1.0e-14 85.1 101 44.6
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.0e-14 83.6 57 75.4
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 7.0e-11 72.4 41 78.0
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.7e-09 67.8 48 64.6
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 5.0e-09 66.2 73 50.7
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.2e-07 61.6 80 43.8
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 1.0e-06 58.5 84 40.5
CSS0037022 Camellia sinensis var. sinensis HOM05D002017 ORTHO05D002042 1.4e-06 58.2 46 60.9


User provided reference genes

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