Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.9e-302 1039.3 500 100.0
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.2e-300 1032.7 500 99.2
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.1e-299 1031.6 500 99.2
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.1e-299 1031.6 500 99.0
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.7e-299 1031.2 500 99.0
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.9e-298 1027.3 500 98.6
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.6e-297 1023.5 500 98.4
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.8e-295 1018.5 500 97.8
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.0e-295 1017.3 500 97.2
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.7e-293 1011.9 500 97.0
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.1e-292 1009.2 500 96.8
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.4e-292 1008.8 500 96.8
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.6e-291 1003.8 500 96.6
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 1.2e-211 740.0 500 70.6
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 5.7e-209 731.1 509 69.4
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 4.5e-206 721.5 499 69.5
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 1.9e-204 716.1 502 68.3
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 4.0e-202 708.4 498 68.7
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 6.4e-200 701.0 499 68.3
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 3.5e-198 695.3 474 69.8
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 4.6e-198 694.9 504 68.5
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 1.3e-197 693.3 497 67.4
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 8.6e-197 690.6 479 68.7
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 4.7e-195 684.9 470 68.9
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 2.6e-193 679.1 498 65.3
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 3.4e-193 678.7 501 65.9
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 7.5e-193 677.6 499 65.9
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 6.4e-192 674.5 497 65.8
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 1.9e-188 662.9 497 65.0
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 6.2e-187 657.9 402 76.4
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 1.1e-186 657.1 503 64.6
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 1.3e-184 650.2 496 63.5
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 1.3e-184 650.2 509 63.7
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 1.4e-183 646.7 502 63.9
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 5.4e-183 644.8 502 63.1
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 4.6e-182 641.7 360 80.8
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 6.0e-182 641.3 500 61.4
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 7.8e-182 641.0 492 64.8
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 1.0e-181 640.6 404 74.3
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 1.3e-181 640.2 400 73.8
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.3e-181 640.2 400 74.5
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 6.6e-181 637.9 489 64.4
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 1.1e-180 637.1 400 73.8
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 1.5e-180 636.7 404 75.7
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 1.9e-180 636.3 496 63.3
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 2.5e-180 636.0 496 63.1
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 1.2e-179 633.6 415 70.8
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 1.2e-179 633.6 499 62.1
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 1.6e-179 633.3 499 62.9
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 8.1e-179 630.9 500 62.2
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 1.1e-178 630.6 494 63.0
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 1.4e-178 630.2 500 62.8
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 1.5e-177 626.7 409 71.6
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 1.5e-177 626.7 398 73.9
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 2.9e-176 622.5 507 60.9
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 3.8e-176 622.1 502 62.4
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 6.4e-176 621.3 405 70.1
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 1.1e-175 620.5 479 64.1
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 3.2e-175 619.0 500 60.0
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 7.1e-175 617.8 498 61.2
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 7.1e-175 617.8 501 60.7
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 1.0e-173 614.0 400 72.0
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 1.3e-173 613.6 492 61.8
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 1.7e-173 613.2 487 62.6
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 3.9e-173 612.1 378 73.0
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 1.1e-172 610.5 494 61.3
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 7.3e-172 607.8 493 58.6
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 9.6e-172 607.4 400 69.5
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 1.2e-171 607.1 487 62.0
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 2.8e-171 605.9 350 82.0
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 4.7e-171 605.1 400 70.8
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 6.9e-170 601.3 402 69.7
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 1.5e-169 600.1 400 69.8
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 3.4e-169 599.0 401 70.1
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 7.6e-169 597.8 396 71.2
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 2.2e-168 596.3 506 59.3
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 6.4e-168 594.7 393 71.2
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 5.4e-167 591.7 502 59.6
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 1.7e-165 586.6 403 67.7
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 2.5e-164 582.8 370 72.4
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 2.8e-163 579.3 499 57.3
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 1.0e-157 560.8 443 60.9
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 1.8e-157 560.1 372 69.9
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 6.7e-157 558.1 359 71.9
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 7.4e-156 554.7 478 58.2
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 1.3e-155 553.9 430 62.3
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 3.1e-154 549.3 391 65.7
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 2.9e-152 542.7 508 54.9
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 3.0e-149 532.7 458 57.2
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 2.5e-148 529.6 489 57.1
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 2.1e-147 526.6 350 68.9
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 1.0e-128 464.5 391 57.0
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 3.8e-128 462.6 386 58.3
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 1.7e-123 447.2 293 72.4
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 1.4e-117 427.6 477 50.1
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 1.5e-116 424.1 353 59.2
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 3.4e-108 396.4 407 49.4
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 7.2e-95 352.1 296 56.4
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 6.3e-91 339.0 209 74.6
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 4.0e-85 319.7 433 40.2
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 9.2e-82 308.5 443 39.1
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 5.6e-71 272.7 447 36.7
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 2.5e-63 247.3 302 44.4
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 2.1e-62 244.2 400 37.2
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 8.9e-61 238.8 162 69.1
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 1.6e-41 174.9 322 31.4
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 2.7e-41 174.1 224 46.4
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 1.5e-28 131.7 308 32.1
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 2.2e-27 127.9 89 68.5
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 2.5e-23 114.4 295 29.2
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 2.5e-18 97.8 73 64.4
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 6.7e-16 89.7 59 64.4
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 7.2e-10 69.7 89 40.4


User provided reference genes

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