Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.4e-92 342.8 162 100.0
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.2e-91 339.7 162 98.8
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.9e-90 334.7 162 98.1
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 3.9e-82 308.1 158 88.6
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 4.3e-81 304.7 158 89.2
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 5.6e-81 304.3 162 87.7
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 6.2e-80 300.8 158 86.7
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 4.0e-79 298.1 158 85.4
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 6.9e-79 297.4 158 87.3
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 9.0e-79 297.0 158 86.1
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 2.6e-78 295.4 161 84.5
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 2.6e-78 295.4 158 85.4
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 5.8e-78 294.3 158 83.5
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 9.9e-78 293.5 158 85.4
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.7e-77 292.7 158 84.2
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 2.9e-77 292.0 158 84.8
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 3.8e-77 291.6 158 84.2
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 4.9e-77 291.2 158 84.8
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 6.4e-77 290.8 158 84.8
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.1e-76 290.0 158 83.5
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.4e-76 289.7 158 82.9
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 1.9e-76 289.3 158 83.5
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 1.9e-76 289.3 158 85.4
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 1.9e-76 289.3 156 85.3
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 3.2e-76 288.5 150 87.3
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 4.2e-76 288.1 158 83.5
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 4.2e-76 288.1 158 83.5
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 4.2e-76 288.1 158 83.5
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 5.4e-76 287.7 158 82.3
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 7.1e-76 287.3 149 87.9
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 7.1e-76 287.3 158 84.2
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 7.1e-76 287.3 162 82.1
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 9.3e-76 287.0 158 82.3
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 1.6e-75 286.2 159 83.6
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 1.6e-75 286.2 155 85.8
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.6e-75 286.2 155 85.8
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.6e-75 286.2 155 85.8
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 3.5e-75 285.0 154 81.8
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 4.6e-75 284.6 158 81.0
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 4.6e-75 284.6 158 81.6
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 4.6e-75 284.6 158 81.6
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 4.6e-75 284.6 158 81.6
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 6.0e-75 284.3 148 87.8
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 6.0e-75 284.3 156 82.7
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 6.0e-75 284.3 156 82.7
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 6.0e-75 284.3 157 83.4
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 7.9e-75 283.9 158 82.9
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.0e-74 283.5 158 81.0
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.0e-74 283.5 158 80.4
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 1.0e-74 283.5 156 82.7
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 1.0e-74 283.5 159 82.4
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.0e-74 283.5 158 81.6
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.7e-74 282.7 152 86.2
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.3e-74 282.3 156 82.1
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 3.0e-74 282.0 158 81.0
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 8.7e-74 280.4 154 81.2
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 1.9e-73 279.3 158 77.2
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 1.9e-73 279.3 158 77.2
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 1.9e-73 279.3 158 80.4
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 1.9e-73 279.3 155 83.9
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 4.3e-73 278.1 154 80.5
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 4.3e-73 278.1 158 80.4
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 1.3e-72 276.6 158 76.6
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 1.6e-72 276.2 158 75.9
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 1.6e-72 276.2 158 76.6
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 2.1e-72 275.8 158 80.4
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 2.1e-72 275.8 158 75.9
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 2.8e-72 275.4 158 79.1
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 3.6e-72 275.0 157 80.3
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 4.8e-72 274.6 158 75.9
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 6.2e-72 274.2 159 79.2
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 6.2e-72 274.2 158 75.9
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 6.2e-72 274.2 211 64.0
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 8.1e-72 273.9 158 82.9
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 1.4e-71 273.1 158 75.9
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 5.3e-71 271.2 158 75.3
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 5.3e-71 271.2 159 75.5
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 9.0e-71 270.4 158 74.7
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 9.0e-71 270.4 156 77.6
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 9.0e-71 270.4 148 86.5
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 4.5e-70 268.1 159 75.5
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 5.8e-70 267.7 166 72.3
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 5.8e-70 267.7 166 72.3
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 5.8e-70 267.7 150 78.7
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 6.4e-69 264.2 156 76.3
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.4e-68 262.3 162 74.7
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.4e-68 262.3 155 74.2
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 3.2e-68 261.9 156 77.6
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 4.2e-68 261.5 157 76.4
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 4.2e-68 261.5 159 75.5
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 5.5e-68 261.2 158 78.5
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 3.5e-67 258.5 155 72.9
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 3.0e-66 255.4 149 76.5
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 3.9e-66 255.0 162 71.6
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 6.7e-66 254.2 159 73.0
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 5.6e-65 251.1 135 83.7
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 7.4e-65 250.8 137 81.8
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.1e-64 249.2 135 83.0
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 1.2e-62 243.4 157 69.4
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 2.6e-62 242.3 144 77.8
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 5.8e-62 241.1 135 80.7
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 7.6e-62 240.7 138 80.4
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 3.8e-61 238.4 152 75.0
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 2.3e-58 229.2 117 88.9
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 8.2e-56 220.7 116 85.3
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 8.2e-56 220.7 138 73.9
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 2.6e-54 215.7 183 60.1
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 2.5e-52 209.1 114 84.2
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.2e-52 208.8 152 61.2
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 1.2e-51 206.8 153 60.8
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 3.5e-51 205.3 116 80.2
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.5e-51 205.3 155 68.4
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 6.1e-51 204.5 121 80.2
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.9e-50 201.8 152 59.2
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 9.7e-49 197.2 102 86.3
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 1.2e-46 190.3 114 74.6
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 4.5e-46 188.3 129 68.2
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 1.1e-44 183.7 96 83.3
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 3.2e-44 182.2 95 87.4
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 4.3e-41 171.8 102 72.5
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 1.7e-37 159.8 157 54.1
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 3.8e-37 158.7 132 58.3
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 4.2e-36 155.2 86 84.9
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 4.2e-36 155.2 135 60.7
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 9.4e-36 154.1 85 83.5
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 1.0e-26 124.0 67 85.1
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 1.9e-20 103.2 52 86.5
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 8.3e-16 87.8 57 68.4
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 8.3e-08 61.2 68 45.6


User provided reference genes

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