Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019716 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 5.9e-40 167.2 89 100.0
CSS0027414 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D000991 2.4e-33 145.2 89 88.8
CSS0040514 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 2.9e-31 138.3 89 83.1
CSS0025159 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 5.0e-31 137.5 89 83.1
CSS0047077 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 4.1e-25 117.9 108 65.7
CSS0041374 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 4.0e-20 101.3 89 67.4
CSS0006314 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 1.4e-17 92.8 89 62.9
Dinv03970 Davidia involucrata HOM05D001126 ORTHO05D000991 2.0e-16 89.0 85 63.5
Dinv06808 Davidia involucrata HOM05D001126 ORTHO05D000991 2.0e-16 89.0 85 63.5
Dinv06803 Davidia involucrata HOM05D001126 ORTHO05D000991 7.7e-16 87.0 85 63.5
Actinidia02123 Actinidia chinensis HOM05D001126 ORTHO05D000991 5.0e-15 84.3 85 58.8
Hma1.2p1_1395F.1_g280480 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 8.6e-15 83.6 88 56.8
Hma1.2p1_0916F.1_g236460 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.1e-14 83.2 88 56.8
Actinidia35915 Actinidia chinensis HOM05D001126 ORTHO05D000991 2.5e-14 82.0 77 63.6
Hma1.2p1_1395F.1_g280520 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 5.5e-14 80.9 87 56.3
Hma1.2p1_1395F.1_g280470 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 9.5e-14 80.1 84 53.6
Hma1.2p1_1814F.1_g303920 Hydrangea macrophylla HOM05D001126 ORTHO05D012932 9.5e-14 80.1 89 57.3
Hma1.2p1_1395F.1_g280490 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.2e-13 79.7 88 55.7
Dinv21624 Davidia involucrata HOM05D001126 ORTHO05D000991 2.1e-13 79.0 85 57.6
Hma1.2p1_1395F.1_g280460 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 2.1e-13 79.0 88 56.8
Rhsim04G0033400 Rhododendron simsii HOM05D001126 ORTHO05D000991 3.6e-13 78.2 84 56.0
Dinv21625 Davidia involucrata HOM05D001126 ORTHO05D000991 4.7e-13 77.8 85 63.5
Hma1.2p1_2031F.1_g311810 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 8.0e-13 77.0 81 59.3
Hma1.2p1_1430F.1_g282950 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.0e-12 76.6 82 57.3
Hma1.2p1_1990F.1_g310170 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.4e-12 76.3 88 54.5
vmacro23133 Vaccinium macrocarpon HOM05D001126 ORTHO05D000991 3.0e-12 75.1 85 51.8
Hma1.2p1_0916F.1_g236495 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 8.9e-12 73.6 71 62.0
Rhsim04G0107300 Rhododendron simsii HOM05D001126 ORTHO05D000991 8.9e-12 73.6 84 52.4
Rhsim11G0051500 Rhododendron simsii HOM05D001126 ORTHO05D000991 3.4e-11 71.6 83 54.2
Dinv10278 Davidia involucrata HOM05D001126 ORTHO05D000991 4.4e-11 71.2 77 58.4
Hma1.2p1_1814F.1_g303925 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 4.4e-11 71.2 88 51.1
Hma1.2p1_1990F.1_g310180 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 4.4e-11 71.2 88 51.1
Lj2C216T3 Lonicera japonica HOM05D001126 ORTHO05D000991 5.7e-11 70.9 66 62.1
Rhsim04G0107100 Rhododendron simsii HOM05D001126 ORTHO05D000991 7.5e-11 70.5 80 55.0
Actinidia35914 Actinidia chinensis HOM05D001126 ORTHO05D000991 1.7e-10 69.3 77 54.5
Hma1.2p1_1814F.1_g303900 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 2.2e-10 68.9 58 67.2
Hma1.2p1_2370F.1_g320790 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 2.2e-10 68.9 58 67.2
Rhsim04G0107800 Rhododendron simsii HOM05D001126 ORTHO05D000991 2.8e-10 68.6 83 53.0
Hma1.2p1_1635F.1_g294810 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 3.7e-10 68.2 85 52.9
Rhsim04G0106900 Rhododendron simsii HOM05D001126 ORTHO05D000991 4.9e-10 67.8 83 51.8
vmacro09047 Vaccinium macrocarpon HOM05D001126 ORTHO05D000991 4.9e-10 67.8 83 51.8
Hma1.2p1_1814F.1_g303930 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 6.3e-10 67.4 88 51.1
Dinv21623 Davidia involucrata HOM05D001126 ORTHO05D000991 1.1e-09 66.6 52 73.1
Migut.O00103 Erythranthe guttata HOM05D001126 ORTHO05D000991 1.1e-09 66.6 87 51.7
Hma1.2p1_0916F.1_g236480 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.4e-09 66.2 58 65.5
Hma1.2p1_3357F.1_g335540 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.4e-09 66.2 88 51.1
Actinidia35911 Actinidia chinensis HOM05D003490 ORTHO05D000991 1.8e-09 65.9 86 48.8
Hma1.2p1_1814F.1_g303910 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.8e-09 65.9 85 50.6
Hma1.2p1_3173F.1_g333590 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 3.1e-09 65.1 85 49.4
Rhsim07G0176400 Rhododendron simsii HOM05D001126 ORTHO05D000991 3.1e-09 65.1 83 51.8
TAR629G0685 Trochodendron aralioides HOM05D001126 ORTHO05D000991 3.1e-09 65.1 73 54.8
ECA248G2315 Erigeron canadensis HOM05D001126 ORTHO05D000991 4.1e-09 64.7 82 43.9
Dinv06805 Davidia involucrata HOM05D001126 ORTHO05D000991 7.0e-09 63.9 51 72.5
Cpa.g.sc29.141 Carica papaya HOM05D001126 ORTHO05D000991 1.2e-08 63.2 84 45.2
Lj8C261T5 Lonicera japonica HOM05D001126 ORTHO05D012932 1.2e-08 63.2 62 61.3
Rhsim04G0107700 Rhododendron simsii HOM05D001126 ORTHO05D000991 2.0e-08 62.4 68 54.4
Migut.O00102 Erythranthe guttata HOM05D001126 ORTHO05D000991 2.7e-08 62.0 87 47.1
SGA_v2.0_scaffold25G10833 Striga asiatica HOM05D001126 ORTHO05D000991 2.7e-08 62.0 76 48.7
Dinv21539 Davidia involucrata HOM05D001126 ORTHO05D000991 3.5e-08 61.6 85 52.9
Migut.O00101 Erythranthe guttata HOM05D001126 ORTHO05D000991 4.5e-08 61.2 88 46.6
Migut.O00111 Erythranthe guttata HOM05D001126 ORTHO05D000991 4.5e-08 61.2 60 58.3
Cfa007765 Carpinus fangiana HOM05D001126 ORTHO05D000991 1.0e-07 60.1 83 50.6
vmacro02651 Vaccinium macrocarpon HOM05D001126 ORTHO05D012932 1.0e-07 60.1 55 60.0
Rhsim04G0107200 Rhododendron simsii HOM05D001126 ORTHO05D000991 1.3e-07 59.7 85 47.1
TWI81G0441 Tripterygium wilfordii HOM05D001126 ORTHO05D000991 1.3e-07 59.7 85 44.7
Migut.O00112 Erythranthe guttata HOM05D001126 ORTHO05D000991 1.7e-07 59.3 58 56.9
Hma1.2p1_1635F.1_g294780 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.7e-07 59.3 58 60.3
Haze_14308 Corylus avellana HOM05D001126 ORTHO05D000991 2.3e-07 58.9 85 48.2
Oeu016890.1 Olea europaea HOM05D001126 ORTHO05D000991 2.3e-07 58.9 85 44.7
Oeu050141.1 Olea europaea HOM05D001126 ORTHO05D000991 2.3e-07 58.9 85 41.2
Atru.chr9.1328 Acer truncatum HOM05D001126 ORTHO05D000991 2.9e-07 58.5 86 47.7
FAN11G0525 Fragaria x ananassa HOM05D001126 ORTHO05D000991 2.9e-07 58.5 71 49.3
Lj8C261G4 Lonicera japonica HOM05D001126 ORTHO05D000991 2.9e-07 58.5 48 60.4
Peaxi162Scf00002g01621 Petunia axillaris HOM05D001126 ORTHO05D000991 2.9e-07 58.5 53 58.5
Rhsim04G0107000 Rhododendron simsii HOM05D001126 ORTHO05D000991 2.9e-07 58.5 85 45.9
Rhsim04G0107500 Rhododendron simsii HOM05D001126 ORTHO05D000991 2.9e-07 58.5 85 47.1
Oeu016891.1 Olea europaea HOM05D001126 ORTHO05D000991 3.9e-07 58.2 85 41.2
RhsimUnG0169500 Rhododendron simsii HOM05D001126 ORTHO05D000991 3.9e-07 58.2 76 51.3
CANSAT21G0832 Cannabis sativa HOM05D001126 ORTHO05D000991 5.0e-07 57.8 87 40.2
FAN16G0079 Fragaria x ananassa HOM05D001126 ORTHO05D000991 5.0e-07 57.8 71 47.9
FAN25G1129 Fragaria x ananassa HOM05D001126 ORTHO05D000991 5.0e-07 57.8 71 47.9
Lsat_1_v5_gn_1_43181 Lactuca sativa HOM05D001126 ORTHO05D000991 5.0e-07 57.8 86 40.7
Oeu016895.1 Olea europaea HOM05D001126 ORTHO05D000991 5.0e-07 57.8 85 40.0
Sopen08g027230 Solanum pennellii HOM05D001126 ORTHO05D000991 5.0e-07 57.8 52 59.6
Actinidia05201 Actinidia chinensis HOM05D001126 ORTHO05D000991 6.6e-07 57.4 61 52.5
FvH4_3g26880 Fragaria vesca HOM05D001126 ORTHO05D000991 6.6e-07 57.4 71 47.9
ECA248G3845 Erigeron canadensis HOM05D001126 ORTHO05D000991 8.6e-07 57.0 74 43.2
Lsat_1_v5_gn_6_34481 Lactuca sativa HOM05D001126 ORTHO05D000991 8.6e-07 57.0 52 59.6
Lj8C261T1 Lonicera japonica HOM05D001126 ORTHO05D000991 8.6e-07 57.0 85 47.1
Cc08_g12620 Coffea canephora HOM05D001126 ORTHO05D000991 1.1e-06 56.6 79 45.6
Lsat_1_v5_gn_1_87001 Lactuca sativa HOM05D001126 ORTHO05D000991 1.1e-06 56.6 53 56.6
Oeu016406.1 Olea europaea HOM05D001126 ORTHO05D000991 1.1e-06 56.6 52 59.6
ECA248G2329 Erigeron canadensis HOM05D001126 ORTHO05D000991 1.5e-06 56.2 72 44.4
Migut.O00110 Erythranthe guttata HOM05D001126 ORTHO05D000991 1.5e-06 56.2 77 45.5
Lsat_1_v5_gn_6_40021 Lactuca sativa HOM05D001126 ORTHO05D000991 1.5e-06 56.2 54 55.6
Lj8C261T3 Lonicera japonica HOM05D001126 ORTHO05D000991 1.5e-06 56.2 48 58.3
AL8G10390 Arabidopsis lyrata HOM05D001126 ORTHO05D000991 1.9e-06 55.8 85 44.7
Gohir.A12G217800 Gossypium hirsutum HOM05D001126 ORTHO05D000991 2.5e-06 55.5 54 55.6
HanXRQChr08g0222761 Helianthus annuus HOM05D001126 ORTHO05D000991 2.5e-06 55.5 53 56.6
Lsat_1_v5_gn_1_43221 Lactuca sativa HOM05D001126 ORTHO05D000991 2.5e-06 55.5 86 41.9
Lsat_1_v5_gn_6_40720 Lactuca sativa HOM05D001126 ORTHO05D000991 2.5e-06 55.5 61 52.5
Cfa012932 Carpinus fangiana HOM05D003906 ORTHO05D000991 3.3e-06 55.1 55 54.5
Dinv21540 Davidia involucrata HOM05D001126 ORTHO05D000991 3.3e-06 55.1 86 50.0
ECA233G1870 Erigeron canadensis HOM05D001126 ORTHO05D000991 3.3e-06 55.1 61 52.5
Lsat_1_v5_gn_1_46400 Lactuca sativa HOM05D001126 ORTHO05D000991 3.3e-06 55.1 79 40.5
Lj8P260T34 Lonicera japonica HOM05D001126 ORTHO05D000991 3.3e-06 55.1 85 43.5
Thecc.03G253400 Theobroma cacao HOM05D001126 ORTHO05D000991 3.3e-06 55.1 79 44.3
Duzib205G0781 Durio zibethinus HOM05D001126 ORTHO05D000991 4.3e-06 54.7 87 42.5
Gohir.D12G220300 Gossypium hirsutum HOM05D001126 ORTHO05D000991 4.3e-06 54.7 54 53.7
Lsat_1_v5_gn_5_87360 Lactuca sativa HOM05D001126 ORTHO05D000991 4.3e-06 54.7 53 56.6
Oeu040843.1 Olea europaea HOM05D001126 ORTHO05D000991 4.3e-06 54.7 57 50.9
Actinidia02122 Actinidia chinensis HOM05D001126 ORTHO05D012932 5.6e-06 54.3 51 60.8
Gorai.008G236000 Gossypium raimondii HOM05D001126 ORTHO05D000991 5.6e-06 54.3 53 54.7
Lsat_1_v5_gn_6_40001 Lactuca sativa HOM05D001126 ORTHO05D000991 5.6e-06 54.3 54 55.6
Lsat_1_v5_gn_6_40281 Lactuca sativa HOM05D001126 ORTHO05D000991 5.6e-06 54.3 61 50.8
Lj2C216T2 Lonicera japonica HOM05D001126 ORTHO05D000991 5.6e-06 54.3 85 43.5
Oeu048636.1 Olea europaea HOM05D001126 ORTHO05D000991 5.6e-06 54.3 85 40.0
RcHm_v2.0_Chr7g0202961 Rosa chinensis HOM05D001126 ORTHO05D000991 5.6e-06 54.3 86 41.9
A10p32930 Brassica napus HOM05D001126 ORTHO05D000991 7.3e-06 53.9 85 45.9
C09p73890 Brassica napus HOM05D001126 ORTHO05D000991 7.3e-06 53.9 87 44.8
BolC9t60122H Brassica oleracea HOM05D001126 ORTHO05D000991 7.3e-06 53.9 87 44.8
BraA10t45330Z Brassica rapa HOM05D001126 ORTHO05D000991 7.3e-06 53.9 85 45.9
ECA233G0214 Erigeron canadensis HOM05D001126 ORTHO05D000991 7.3e-06 53.9 52 53.8
HanXRQChr09g0263641 Helianthus annuus HOM05D001126 ORTHO05D000991 7.3e-06 53.9 61 47.5
HanXRQChr15g0467631 Helianthus annuus HOM05D001126 ORTHO05D000991 7.3e-06 53.9 61 47.5
HanXRQChr17g0540721 Helianthus annuus HOM05D001126 ORTHO05D000991 7.3e-06 53.9 61 47.5
Hma1.2p1_1635F.1_g294800 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 7.3e-06 53.9 52 61.5
Hma1.2p1_3207F.1_g333980 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 7.3e-06 53.9 52 61.5
Oeu048634.1 Olea europaea HOM05D001126 ORTHO05D000991 7.3e-06 53.9 85 38.8
CiPaw.11G152900 Carya illinoinensis HOM05D001126 ORTHO05D000991 9.5e-06 53.5 76 46.1
ECA246G1370 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.5e-06 53.5 61 50.8
Eucgr.D02052 Eucalyptus grandis HOM05D001126 ORTHO05D000991 9.5e-06 53.5 55 58.2
HanXRQChr17g0542991 Helianthus annuus HOM05D001126 ORTHO05D012932 9.5e-06 53.5 61 50.8
Lsat_1_v5_gn_1_46500 Lactuca sativa HOM05D001126 ORTHO05D000991 9.5e-06 53.5 79 39.2


User provided reference genes

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