Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.5e-203 712.6 354 100.0
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.5e-195 686.0 354 96.3
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.5e-190 667.5 340 97.9
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.6e-189 664.8 356 94.7
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.6e-179 632.1 354 91.2
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 3.7e-170 601.7 354 82.5
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 3.7e-170 601.7 354 82.5
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.6e-167 590.5 354 85.9
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 4.0e-148 528.5 357 69.7
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 4.1e-145 518.5 348 75.0
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 4.1e-145 518.5 350 72.3
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 6.0e-144 514.6 357 72.3
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 1.0e-143 513.8 364 70.9
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 1.5e-142 510.0 357 71.4
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 1.4e-140 503.4 347 71.2
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.2e-139 500.4 362 68.2
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 1.5e-139 500.0 360 69.4
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 7.6e-139 497.7 356 69.7
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 2.2e-138 496.1 346 69.7
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 1.4e-137 493.4 358 71.2
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 5.4e-137 491.5 354 70.1
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 7.1e-137 491.1 359 69.9
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 2.1e-136 489.6 362 65.7
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 1.3e-135 486.9 348 67.0
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 1.7e-135 486.5 344 69.5
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 2.3e-135 486.1 356 68.0
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 6.6e-135 484.6 348 70.4
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 1.5e-134 483.4 356 65.7
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 1.9e-134 483.0 350 69.4
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 9.6e-134 480.7 344 69.8
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 2.8e-133 479.2 356 66.9
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 6.2e-133 478.0 348 68.7
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 1.1e-132 477.2 385 64.7
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 1.4e-132 476.9 362 65.2
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 1.4e-132 476.9 362 65.2
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 1.8e-132 476.5 356 68.0
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 3.1e-132 475.7 356 64.6
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 3.1e-132 475.7 354 64.7
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.1e-132 475.7 348 68.1
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 3.1e-132 475.7 356 66.9
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 1.2e-131 473.8 348 68.4
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 3.4e-131 472.2 362 65.7
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 4.4e-131 471.9 356 66.6
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 7.6e-131 471.1 362 65.7
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 7.6e-131 471.1 362 65.7
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 7.6e-131 471.1 345 68.1
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 1.3e-130 470.3 354 67.2
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 1.4e-129 466.8 356 66.0
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 1.4e-129 466.8 345 67.5
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 1.9e-129 466.5 348 66.7
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 1.9e-129 466.5 356 66.0
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.4e-129 466.1 348 67.5
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 1.6e-128 463.4 350 67.4
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 2.7e-128 462.6 336 68.8
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 6.0e-128 461.5 348 65.8
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 3.0e-127 459.1 360 62.8
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 8.7e-127 457.6 373 63.0
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 1.9e-126 456.4 372 60.8
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 7.3e-126 454.5 352 67.3
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 1.3e-125 453.8 353 62.9
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.6e-125 453.4 359 64.9
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 2.0e-123 446.4 354 66.4
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 4.9e-122 441.8 352 64.2
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 8.4e-122 441.0 329 66.6
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 2.1e-120 436.4 364 62.4
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 2.3e-119 433.0 346 61.0
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 4.3e-118 428.7 356 60.4
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 9.6e-118 427.6 354 59.6
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 2.8e-117 426.0 358 61.5
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 2.8e-117 426.0 355 62.5
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 6.2e-117 424.9 358 61.2
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.1e-116 424.1 352 62.2
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 1.1e-116 424.1 367 59.9
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 1.4e-116 423.7 367 59.1
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 1.8e-116 423.3 355 60.8
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.8e-116 423.3 360 61.4
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 3.1e-116 422.5 352 62.2
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 3.1e-116 422.5 356 61.8
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 5.3e-116 421.8 353 61.2
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 9.0e-116 421.0 370 59.5
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 4.5e-115 418.7 358 60.6
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 2.2e-114 416.4 358 60.1
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 2.2e-114 416.4 368 61.7
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 1.6e-112 410.2 350 58.9
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 6.0e-112 408.3 357 58.8
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 4.3e-110 402.1 356 59.8
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 1.1e-108 397.5 334 62.3
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 1.8e-108 396.7 335 61.8
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 4.0e-108 395.6 335 61.5
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 1.2e-107 394.0 335 61.2
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 1.1e-105 387.5 360 59.2
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 1.4e-105 387.1 334 61.7
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 4.2e-105 385.6 338 58.6
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.3e-102 375.6 211 91.5
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.1e-100 369.4 211 89.6
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.3e-100 368.6 211 90.5
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 1.4e-97 360.5 227 75.8
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 4.2e-97 359.0 250 70.4
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 4.6e-96 355.5 235 74.5
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 1.7e-85 320.5 352 50.0
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 4.5e-83 312.4 225 69.3
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 1.7e-82 310.5 345 50.1
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 3.9e-79 299.3 311 52.7
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 3.1e-76 289.7 351 43.0
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 3.2e-73 279.6 163 77.9
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 1.0e-71 274.6 371 40.7
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 7.0e-68 261.9 211 65.9
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 1.7e-66 257.3 215 59.1
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 2.2e-66 256.9 216 63.4
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.2e-64 251.1 214 66.4
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 1.4e-63 247.7 313 45.4
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.5e-59 232.6 120 95.0
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 3.4e-54 216.5 146 74.0
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 2.6e-46 190.3 378 32.3
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 9.8e-46 188.3 240 46.2
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 1.4e-44 184.5 145 59.3
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 9.5e-33 145.2 165 42.4
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-27 127.9 65 98.5
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.9e-25 120.9 65 92.3
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.2e-21 107.5 65 86.2
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 3.2e-12 77.0 52 65.4
QL93p0107_0059 Quercus lobata HOM05D006038 ORTHO05D007547 1.2e-11 75.1 56 60.7
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 1.6e-11 74.7 53 66.0
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 1.6e-11 74.7 53 66.0
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 1.6e-11 74.7 53 66.0
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 3.5e-11 73.6 56 62.5
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 3.5e-11 73.6 57 59.6
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 6.0e-11 72.8 158 30.4
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 1.0e-10 72.0 157 35.0
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 2.4e-07 60.8 49 59.2
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 2.4e-07 60.8 49 59.2
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 2.4e-07 60.8 49 59.2
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 2.4e-07 60.8 49 59.2


User provided reference genes

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