Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 1.0e-102 376.7 183 100.0
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 7.5e-82 307.4 150 97.3
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 1.2e-60 236.9 166 69.9
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 2.8e-60 235.7 151 72.8
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 6.8e-59 231.1 149 75.2
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 4.1e-56 221.9 149 71.8
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 5.4e-56 221.5 154 70.1
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 2.8e-52 209.1 142 67.6
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 1.8e-51 206.5 127 74.8
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 2.4e-51 206.1 136 69.1
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 8.9e-51 204.1 136 68.4
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 1.5e-50 203.4 139 66.2
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 4.4e-50 201.8 139 66.2
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 4.4e-50 201.8 138 67.4
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 7.6e-50 201.1 140 65.0
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 3.8e-49 198.7 147 62.6
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 8.4e-49 197.6 152 59.9
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 1.1e-48 197.2 150 61.3
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 1.1e-48 197.2 141 62.4
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 1.1e-48 197.2 147 61.9
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 1.4e-48 196.8 138 65.9
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 1.2e-47 193.7 141 61.7
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 3.5e-47 192.2 146 61.6
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 6.0e-47 191.4 140 65.0
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 7.8e-47 191.0 139 63.3
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 7.8e-47 191.0 181 55.2
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 1.0e-46 190.7 149 65.1
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 1.1e-45 187.2 145 62.1
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 1.5e-45 186.8 147 59.9
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 1.5e-45 186.8 146 61.6
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 4.3e-45 185.3 147 61.2
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 7.3e-45 184.5 140 60.7
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 9.6e-45 184.1 154 60.4
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 1.2e-44 183.7 146 59.6
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 1.6e-44 183.3 140 60.7
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 2.8e-44 182.6 160 55.6
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 3.6e-44 182.2 136 61.8
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 3.6e-44 182.2 128 64.1
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 4.7e-44 181.8 150 58.7
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 6.2e-44 181.4 160 55.6
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 1.1e-43 180.6 138 60.9
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.1e-43 180.6 143 57.3
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 1.4e-43 180.3 153 57.5
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 1.4e-43 180.3 147 58.5
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.4e-43 180.3 152 58.6
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 1.8e-43 179.9 139 59.7
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 3.1e-43 179.1 147 58.5
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 5.2e-43 178.3 130 61.5
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 5.2e-43 178.3 148 60.1
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 6.9e-43 177.9 130 60.8
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 6.9e-43 177.9 140 57.9
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 9.0e-43 177.6 140 57.1
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 1.5e-42 176.8 143 56.6
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 1.3e-41 173.7 143 54.5
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 1.3e-41 173.7 125 62.4
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 2.2e-41 172.9 143 54.5
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 2.2e-41 172.9 143 55.9
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 2.9e-41 172.6 139 59.7
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 4.9e-41 171.8 124 62.1
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 4.9e-41 171.8 139 59.7
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 1.4e-40 170.2 138 59.4
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 1.9e-40 169.9 143 53.8
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 1.9e-40 169.9 143 53.8
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 3.2e-40 169.1 142 51.4
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 4.2e-40 168.7 148 51.4
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 7.1e-40 167.9 143 52.4
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 7.1e-40 167.9 143 52.4
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 7.1e-40 167.9 161 54.7
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 9.3e-40 167.5 142 57.7
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 1.2e-39 167.2 139 59.0
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 1.6e-39 166.8 143 52.4
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 2.1e-39 166.4 143 51.7
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 2.1e-39 166.4 143 51.7
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 2.7e-39 166.0 148 50.7
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 2.7e-39 166.0 143 55.9
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 6.0e-39 164.9 136 59.6
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 1.7e-38 163.3 124 62.9
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 6.6e-38 161.4 119 59.7
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 2.5e-37 159.5 138 59.4
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 2.5e-37 159.5 123 59.3
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 1.3e-36 157.1 148 48.0
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 6.2e-36 154.8 150 50.0
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 1.1e-35 154.1 123 58.5
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 6.9e-35 151.4 138 52.9
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 9.0e-35 151.0 135 54.1
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 1.5e-34 150.2 142 50.7
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 3.4e-34 149.1 161 50.3
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 3.8e-33 145.6 150 47.3
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 6.4e-33 144.8 171 45.6
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.9e-32 143.3 132 51.5
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 7.1e-32 141.4 93 72.0
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 9.3e-32 141.0 125 52.0
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 9.3e-32 141.0 125 52.0
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.6e-31 140.2 159 48.4
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 2.3e-30 136.3 144 50.7
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 3.9e-30 135.6 93 65.6
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 8.7e-30 134.4 131 51.1
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 1.8e-27 126.7 92 60.9
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 3.8e-25 119.0 119 49.6
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 1.4e-24 117.1 138 45.7
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 3.2e-24 115.9 198 34.3
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 2.1e-23 113.2 96 53.1
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 3.5e-23 112.5 123 48.0
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 1.0e-22 110.9 168 37.5
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 3.0e-22 109.4 87 58.6
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 1.5e-21 107.1 90 60.0
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 3.7e-20 102.4 124 40.3
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 6.2e-20 101.7 117 38.5
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 2.5e-16 89.7 126 38.1
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 6.3e-12 75.1 75 52.0
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 1.5e-10 70.5 93 37.6
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 1.7e-09 67.0 125 32.8
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 2.9e-09 66.2 143 32.2
Cfa010446 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.4e-08 63.9 45 62.2
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 1.4e-08 63.9 53 56.6
Cfa003473 Carpinus fangiana HOM05D006750 ORTHO05D008426 9.4e-08 61.2 32 78.1
MBI18_g36125_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 2.7e-07 59.7 53 49.1
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 2.7e-07 59.7 70 42.9
Cfa005130 Carpinus fangiana HOM05D000013 ORTHO05D000011 1.4e-06 57.4 32 71.9
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 1.8e-06 57.0 144 31.2
Cfa014827 Carpinus fangiana HOM05D006750 ORTHO05D008426 3.0e-06 56.2 31 74.2
Cfa001145 Carpinus fangiana HOM05D000011 ORTHO05D000157 6.7e-06 55.1 35 68.6


User provided reference genes

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