Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019679 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 4.8e-102 374.4 177 100.0
CSS0004473 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 8.5e-99 363.6 177 97.7
CSS0043152 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 6.3e-78 294.3 177 81.9
CSS0030841 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 3.5e-52 208.8 183 60.7
CSS0021561 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 9.9e-47 190.7 162 64.8
Rhsim11G0070600 Rhododendron simsii HOM05D001090 ORTHO05D008663 1.8e-40 169.9 164 56.7
Actinidia29485 Actinidia chinensis HOM05D001090 ORTHO05D008663 5.3e-40 168.3 162 56.8
Actinidia03422 Actinidia chinensis HOM05D001090 ORTHO05D008663 2.0e-39 166.4 162 58.0
Peaxi162Scf01003g00015 Petunia axillaris HOM05D001090 ORTHO05D008663 5.8e-39 164.9 165 53.3
DCAR_018875 Daucus carota HOM05D001090 ORTHO05D008663 2.2e-38 162.9 162 52.5
Nitab4.5_0002045g0020 Nicotiana tabacum HOM05D001090 ORTHO05D008663 3.8e-38 162.2 162 54.9
Dinv14668 Davidia involucrata HOM05D001090 ORTHO05D008663 3.5e-36 155.6 162 53.1
CiPaw.15G032400 Carya illinoinensis HOM05D001090 ORTHO05D008663 3.6e-33 145.6 162 50.6
Nitab4.5_0001168g0020 Nicotiana tabacum HOM05D001090 ORTHO05D008663 9.0e-32 141.0 150 52.0
Cc10_g12630 Coffea canephora HOM05D001090 ORTHO05D008663 7.6e-31 137.9 141 50.4
Hma1.2p1_1129F.1_g259860 Hydrangea macrophylla HOM05D001090 ORTHO05D008663 1.3e-30 137.1 162 48.8
Nn1g08979 Nelumbo nucifera HOM05D001090 ORTHO05D008663 2.2e-30 136.3 141 51.1
QL09p032725 Quercus lobata HOM05D001090 ORTHO05D008663 2.9e-30 136.0 162 48.8
Lj7C349G17 Lonicera japonica HOM05D001090 ORTHO05D002687 8.4e-30 134.4 164 48.8
SGA_v2.0_scaffold24G10429 Striga asiatica HOM05D001090 ORTHO05D008663 1.1e-29 134.0 143 51.7
Cfa018121 Carpinus fangiana HOM05D001090 ORTHO05D008663 5.4e-29 131.7 162 46.3
GSVIVG01008814001 Vitis vinifera HOM05D001090 ORTHO05D008663 7.1e-29 131.3 162 46.3
Aqoxy6G00325 Aquilegia oxysepala HOM05D001090 ORTHO05D008663 2.7e-28 129.4 141 45.4
MBI03_g28477_MAGBIO Magnolia biondii HOM05D001090 ORTHO05D008663 6.0e-28 128.3 162 43.8
Prupe.1G490500 Prunus persica HOM05D001090 ORTHO05D008663 8.7e-27 124.4 141 48.2
Glyma.06G116800 Glycine max HOM05D001090 ORTHO05D008663 1.1e-26 124.0 144 45.1
Lj1g0016545 Lotus japonicus HOM05D001090 ORTHO05D008663 1.5e-26 123.6 141 46.1
Oeu021884.2 Olea europaea HOM05D001090 ORTHO05D008663 2.5e-26 122.9 135 47.4
RcHm_v2.0_Chr6g0296591 Rosa chinensis HOM05D001090 ORTHO05D008663 3.3e-26 122.5 141 44.7
Thecc.08G132300 Theobroma cacao HOM05D001090 ORTHO05D008663 3.3e-26 122.5 141 48.9
TWI34G0871 Tripterygium wilfordii HOM05D001090 ORTHO05D008663 3.3e-26 122.5 162 43.2
Sc15g0007530 Simmondsia chinensis HOM05D001090 ORTHO05D008663 5.6e-26 121.7 142 45.8
FvH4_2g27740 Fragaria vesca HOM05D001090 ORTHO05D008663 9.6e-26 120.9 141 45.4
Atru.chr13.1551 Acer truncatum HOM05D001090 ORTHO05D008663 1.6e-25 120.2 164 43.9
Migut.C01061 Erythranthe guttata HOM05D001090 ORTHO05D008663 6.2e-25 118.2 162 42.0
Ca_16604_v3 Cicer arietinum L. HOM05D001090 ORTHO05D002687 8.1e-25 117.9 141 44.0
FAN20G0562 Fragaria x ananassa HOM05D001090 ORTHO05D002687 8.1e-25 117.9 141 45.4
Phvul.009G129300 Phaseolus vulgaris HOM05D001090 ORTHO05D008663 8.1e-25 117.9 144 44.4
MSTRG.25363 Avicennia marina HOM05D001090 ORTHO05D008663 1.4e-24 117.1 162 41.4
PGSC0003DMG401006052 Solanum tuberosum HOM05D001090 ORTHO05D008663 1.8e-24 116.7 162 43.8
arahy.Tifrunner.gnm1.ann1.NR7S6L Arachis hypogaea HOM05D001090 ORTHO05D008663 2.4e-24 116.3 141 43.3
CANSAT56G3793 Cannabis sativa HOM05D001090 ORTHO05D008663 2.4e-24 116.3 189 38.6
VMungo1309G2387 Vigna mungo HOM05D001090 ORTHO05D008663 2.4e-24 116.3 141 44.0
Sopen11g001050 Solanum pennellii HOM05D001090 ORTHO05D008663 4.0e-24 115.5 162 45.1
FAN24G1236 Fragaria x ananassa HOM05D001090 ORTHO05D002687 5.3e-24 115.2 141 44.0
Solyc11g005030.3 Solanum lycopersicum HOM05D001090 ORTHO05D008663 5.3e-24 115.2 162 44.4
TPR.G13463 Trifolium pratense HOM05D001090 ORTHO05D008663 9.0e-24 114.4 141 41.8
Medtr3g088545 Medicago truncatula HOM05D001090 ORTHO05D008663 1.2e-23 114.0 141 43.3
PSO017G6856 Papaver somniferum HOM05D001090 ORTHO05D008663 1.2e-23 114.0 141 43.3
EL10Ac7g17319 Beta vulgaris HOM05D001090 ORTHO05D008663 1.5e-23 113.6 141 43.3
Lalb_Chr08g0241151 Lupinus albus HOM05D001090 ORTHO05D008663 1.5e-23 113.6 142 44.4
COL.COLO4_05689 Corchorus olitorius HOM05D001090 ORTHO05D008663 2.0e-23 113.2 154 43.5
FAN15G0022 Fragaria x ananassa HOM05D001090 ORTHO05D002687 2.0e-23 113.2 141 44.7
FAN27G1391 Fragaria x ananassa HOM05D001090 ORTHO05D002687 2.0e-23 113.2 141 44.7
Psat5g085040 Pisum sativum HOM05D001090 ORTHO05D008663 3.4e-23 112.5 141 41.8
arahy.Tifrunner.gnm1.ann1.FIZF7Q Arachis hypogaea HOM05D001090 ORTHO05D008663 4.5e-23 112.1 141 41.8
Hund17320 Selenicereus undatus HOM05D001090 ORTHO05D008663 1.7e-22 110.2 141 41.1
HanXRQChr02g0041931 Helianthus annuus HOM05D001090 ORTHO05D008663 2.2e-22 109.8 164 43.9
AUR62040524 Chenopodium quinoa HOM05D001090 ORTHO05D008663 2.9e-22 109.4 149 38.9
Ah.15g092020 Amaranthus hybridus HOM05D001090 ORTHO05D008663 3.8e-22 109.0 141 42.6
Duzib041G0130 Durio zibethinus HOM05D001090 ORTHO05D008663 3.8e-22 109.0 163 41.7
Eucgr.F03832 Eucalyptus grandis HOM05D001090 ORTHO05D008663 3.8e-22 109.0 85 60.0
Gorai.005G088100 Gossypium raimondii HOM05D001090 ORTHO05D008663 3.8e-22 109.0 164 40.2
Potri.019G066500 Populus trichocarpa HOM05D001090 ORTHO05D008663 4.9e-22 108.6 162 42.0
Ciclev10000294m.g Citrus clementina HOM05D001090 ORTHO05D008663 6.5e-22 108.2 162 40.7
Manes.18G082000 Manihot esculenta HOM05D001090 ORTHO05D008663 1.9e-21 106.7 130 47.7
PSO170G6226 Papaver somniferum HOM05D001090 ORTHO05D008663 4.2e-21 105.5 142 41.5
Lsat_1_v5_gn_1_9840 Lactuca sativa HOM05D001090 ORTHO05D008663 5.5e-21 105.1 165 41.2
vmacro16445 Vaccinium macrocarpon HOM05D001090 ORTHO05D008663 5.5e-21 105.1 270 32.6
SalBow7G3344 Salvia bowleyana HOM05D001090 ORTHO05D008663 9.3e-21 104.4 162 38.3
SalBow7G3826 Salvia bowleyana HOM05D001090 ORTHO05D008663 9.3e-21 104.4 162 38.3
TWI32G0149 Tripterygium wilfordii HOM05D001090 ORTHO05D002687 1.2e-20 104.0 163 39.9
AL1G34800 Arabidopsis lyrata HOM05D001090 ORTHO05D008663 2.7e-20 102.8 141 43.3
Carub.0001s2108 Capsella rubella HOM05D001090 ORTHO05D008663 3.5e-20 102.4 141 43.3
CARHR022000 Cardamine hirsuta HOM05D001090 ORTHO05D002687 1.3e-19 100.5 141 42.6
Sabra19G0078400 Salix brachista HOM05D001090 ORTHO05D008663 1.8e-19 100.1 162 40.7
AT1G21650 Arabidopsis thaliana HOM05D001090 ORTHO05D002687 3.0e-19 99.4 141 41.8
AT1G21651 Arabidopsis thaliana HOM05D001090 ORTHO05D008663 3.0e-19 99.4 141 41.8
ECA238G2411 Erigeron canadensis HOM05D001090 ORTHO05D008663 5.1e-19 98.6 166 40.4
Sp1g19180 Schrenkiella parvula HOM05D001090 ORTHO05D008663 6.7e-19 98.2 141 42.6
unitig_0.g2283 Utricularia gibba HOM05D001090 ORTHO05D008663 1.1e-18 97.4 144 38.2
Thhalv10006535m.g Eutrema salsugineum HOM05D001090 ORTHO05D002687 7.4e-18 94.7 141 40.4
CDE02G2378 Ceratophyllum demersum HOM05D001090 ORTHO05D008663 9.6e-18 94.4 168 32.1
A06p17720 Brassica napus HOM05D001090 ORTHO05D008663 1.6e-17 93.6 162 37.0
BraA06t24864Z Brassica rapa HOM05D001090 ORTHO05D008663 1.6e-17 93.6 162 37.0
SHI09187 Sapria himalayana HOM05D001090 ORTHO05D008663 3.7e-17 92.4 166 34.9
ATR0584G005 Amborella trichopoda HOM05D001090 ORTHO05D008663 6.2e-17 91.7 141 36.2
Gohir.D02G078900 Gossypium hirsutum HOM05D001090 ORTHO05D008663 1.1e-16 90.9 105 45.7
BcaC05g26082 Brassica carinata HOM05D001090 ORTHO05D008663 1.4e-16 90.5 141 39.0
CsaV3_1G032930 Cucumis sativus L. HOM05D001090 ORTHO05D008663 1.4e-16 90.5 164 37.2
Aa31LG7G5630 Aethionema arabicum HOM05D001090 ORTHO05D008663 2.4e-16 89.7 141 40.4
C05p20620 Brassica napus HOM05D001090 ORTHO05D008663 4.1e-16 89.0 141 37.6
BolC5t30760H Brassica oleracea HOM05D001090 ORTHO05D008663 4.1e-16 89.0 141 37.6
MELO3C002690.2 Cucumis melo HOM05D001090 ORTHO05D008663 6.9e-16 88.2 164 36.6
THA.LOC104813679 Tarenaya hassleriana HOM05D001090 ORTHO05D008663 1.5e-15 87.0 141 36.2
Lj7A347T47 Lonicera japonica HOM05D001090 ORTHO05D008663 3.4e-15 85.9 80 53.8
Gohir.A02G071600 Gossypium hirsutum HOM05D001090 ORTHO05D008663 5.8e-15 85.1 105 43.8
BcaB07g32158 Brassica carinata HOM05D001090 ORTHO05D008663 1.0e-14 84.3 141 36.9
CDE08G1173 Ceratophyllum demersum HOM05D001090 ORTHO05D008663 1.1e-13 80.9 62 56.5
Cpa.g.sc64.146 Carica papaya HOM05D001090 ORTHO05D008663 5.7e-10 68.6 174 29.9
Sed0003425 Sechium edule HOM05D001090 ORTHO05D008663 7.7e-07 58.2 80 40.0
HPP92_013748 Vanilla planifolia HOM05D001090 ORTHO05D008663 1.0e-06 57.8 100 32.0


User provided reference genes

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