Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019658 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 1.2e-158 563.1 301 100.0
Actinidia38795 Actinidia chinensis HOM05D004960 ORTHO05D004696 2.0e-79 300.1 308 57.1
Manes.13G066000 Manihot esculenta HOM05D004960 ORTHO05D004696 1.8e-56 223.8 272 47.4
Eucgr.J03153 Eucalyptus grandis HOM05D004960 ORTHO05D004696 3.1e-56 223.0 283 43.5
Potri.010G250300 Populus trichocarpa HOM05D004960 ORTHO05D004696 1.1e-53 214.5 294 45.6
TAR383G0876 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.2e-44 184.5 302 40.1
TAR383G0345 Trochodendron aralioides HOM05D004960 ORTHO05D004696 2.7e-44 183.3 291 41.2
TAR626G0702 Trochodendron aralioides HOM05D004960 ORTHO05D004696 6.0e-44 182.2 290 40.7
MBI14_g30696_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 7.8e-44 181.8 303 40.3
TAR383G0614 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.3e-43 181.0 302 40.1
Eucgr.F04013 Eucalyptus grandis HOM05D004960 ORTHO05D004696 5.6e-42 175.6 285 39.6
MBI14_g30695_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 8.9e-40 168.3 307 39.7
TWI12G0285 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 1.4e-32 144.4 299 33.8
TWI12G0641 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 1.2e-31 141.4 298 35.2
ATR0580G065 Amborella trichopoda HOM05D004960 ORTHO05D004696 1.0e-27 128.3 307 31.3
TAR626G1729 Trochodendron aralioides HOM05D004960 ORTHO05D004696 3.0e-27 126.7 287 32.8
ATR0580G174 Amborella trichopoda HOM05D004960 ORTHO05D004696 6.9e-24 115.5 294 28.6
MBI14_g30701_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.4e-21 107.8 288 31.6
Actinidia21870 Actinidia chinensis HOM05D004960 ORTHO05D004696 1.9e-21 107.5 218 36.7
MBI14_g30694_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 3.5e-20 103.2 305 29.8
Dinv37795 Davidia involucrata HOM05D004960 ORTHO05D004696 1.8e-19 100.9 84 65.5
MBI14_g30692_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 3.0e-19 100.1 302 31.5
Hma1.2p1_0921F.1_g236760 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 4.3e-18 96.3 293 27.6
Hma1.2p1_0921F.1_g236792 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 4.3e-18 96.3 293 27.6
Nn2g12577 Nelumbo nucifera HOM05D004960 ORTHO05D004696 4.3e-18 96.3 309 29.1
TAR626G1223 Trochodendron aralioides HOM05D004960 ORTHO05D004696 7.4e-18 95.5 292 31.5
TAR625G0177 Trochodendron aralioides HOM05D004960 ORTHO05D004696 4.5e-15 86.3 310 29.0
CSS0034998 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 5.8e-15 85.9 301 26.9
CSS0049948 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 1.7e-14 84.3 298 27.9
MBI14_g30697_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 4.9e-14 82.8 292 26.7
MBI14_g30699_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 4.9e-14 82.8 301 28.6
Nn8g40270 Nelumbo nucifera HOM05D004960 ORTHO05D004696 6.4e-14 82.4 306 27.1
TAR626G1419 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.1e-13 81.6 287 30.3
Cc06_g13870 Coffea canephora HOM05D004960 ORTHO05D004696 2.5e-13 80.5 302 26.2
Cfa013540 Carpinus fangiana HOM05D004960 ORTHO05D004696 9.3e-13 78.6 276 27.5
COL.COLO4_16060 Corchorus olitorius HOM05D004960 ORTHO05D004696 9.3e-13 78.6 293 28.0
Dinv43330 Davidia involucrata HOM05D004960 ORTHO05D004696 9.3e-13 78.6 225 30.2
CSS0018327 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 1.6e-12 77.8 295 26.8
RcHm_v2.0_Chr4g0404711 Rosa chinensis HOM05D004960 ORTHO05D004696 1.0e-11 75.1 311 28.6
Aqoxy7G03205 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 1.8e-11 74.3 299 26.1
Eucgr.C00202 Eucalyptus grandis HOM05D004960 ORTHO05D004696 1.8e-11 74.3 281 26.7
Nn1g04315 Nelumbo nucifera HOM05D004960 ORTHO05D004696 2.3e-11 73.9 219 27.9
Prupe.1G095900 Prunus persica HOM05D004960 ORTHO05D004696 2.3e-11 73.9 295 27.8
Haze_10109 Corylus avellana HOM05D004960 ORTHO05D004696 3.9e-11 73.2 289 26.3
Aqoxy7G03204 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 1.5e-10 71.2 310 27.7
Lsat_1_v5_gn_8_65701 Lactuca sativa HOM05D004960 ORTHO05D004696 1.5e-10 71.2 286 27.3
SEGI_26894 Sequoiadendron giganteum HOM05D001062 ORTHO05D000884 2.5e-10 70.5 289 27.3
HPP92_010759 Vanilla planifolia HOM05D004960 ORTHO05D004696 3.3e-10 70.1 293 26.6
CSS0038346 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 5.6e-10 69.3 288 26.4
Dinv41300 Davidia involucrata HOM05D004960 ORTHO05D004696 5.6e-10 69.3 286 25.9
Aqoxy7G03208 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 7.4e-10 68.9 295 27.1
TAR626G1398 Trochodendron aralioides HOM05D004960 ORTHO05D004696 9.6e-10 68.6 226 32.3
CSS0022952 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 1.3e-09 68.2 288 26.4
TWI34G0908 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 2.8e-09 67.0 231 29.4
CSS0015847 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 4.8e-09 66.2 294 24.5
Hma1.2p1_0921F.1_g236770 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 4.8e-09 66.2 226 25.7
Hma1.2p1_0921F.1_g236794 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 4.8e-09 66.2 226 25.7
QL02p095902 Quercus lobata HOM05D004960 ORTHO05D004696 1.1e-08 65.1 294 25.2
Rhsim01G0010200 Rhododendron simsii HOM05D004960 ORTHO05D004696 1.1e-08 65.1 293 23.2
Thecc.09G162700 Theobroma cacao HOM05D004960 ORTHO05D004696 1.1e-08 65.1 293 26.3
Migut.K00271 Erythranthe guttata HOM05D004960 ORTHO05D004696 1.4e-08 64.7 213 26.3
Lalb_Chr25g0281621 Lupinus albus HOM05D001062 ORTHO05D000884 1.8e-08 64.3 292 24.0
MBI14_g30691_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.8e-08 64.3 299 26.4
Oeu043380.1 Olea europaea HOM05D004960 ORTHO05D004696 2.4e-08 63.9 219 23.7
MBI02_g35824_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D007039 3.1e-08 63.5 296 23.0
MD16G1263500 Malus domestica HOM05D004960 ORTHO05D004696 3.1e-08 63.5 291 26.5
CsaV3_6G035630 Cucumis sativus L. HOM05D001062 ORTHO05D000884 4.0e-08 63.2 296 26.0
EL10Ac6g15296 Beta vulgaris HOM05D001062 ORTHO05D000884 5.3e-08 62.8 291 25.8
CSS0021222 Camellia sinensis var. sinensis HOM05D001062 ORTHO05D000884 9.0e-08 62.0 290 26.2
Atru.chr7.532 Acer truncatum HOM05D004960 ORTHO05D004696 1.5e-07 61.2 293 25.3
CSS0049252 Camellia sinensis var. sinensis HOM05D001062 ORTHO05D000884 1.5e-07 61.2 291 25.8
MELO3C010587.2 Cucumis melo HOM05D001062 ORTHO05D000884 1.5e-07 61.2 296 25.7
Lj4P839T38 Lonicera japonica HOM05D001062 ORTHO05D000884 1.5e-07 61.2 275 22.2
TWI63G1126 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 1.5e-07 61.2 298 23.8
Oeu033667.1 Olea europaea HOM05D001062 ORTHO05D000884 2.0e-07 60.8 292 22.9
Nn3g16144 Nelumbo nucifera HOM05D001062 ORTHO05D000884 2.6e-07 60.5 289 22.5
Nn3g17062 Nelumbo nucifera HOM05D001062 ORTHO05D000884 2.6e-07 60.5 289 22.5
SalBow1G3390 Salvia bowleyana HOM05D001062 ORTHO05D000884 2.6e-07 60.5 290 22.1
Migut.J01430 Erythranthe guttata HOM05D004960 ORTHO05D004696 4.5e-07 59.7 284 26.4
Dinv42772 Davidia involucrata HOM05D004960 ORTHO05D004696 7.6e-07 58.9 178 28.1
SHI09266 Sapria himalayana HOM05D001062 ORTHO05D000884 7.6e-07 58.9 297 24.9
Migut.H00697 Erythranthe guttata HOM05D001062 ORTHO05D000884 1.0e-06 58.5 290 24.1
Sed0002264 Sechium edule HOM05D001062 ORTHO05D000884 1.0e-06 58.5 297 24.6
Aqoxy7G03202 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 1.3e-06 58.2 287 24.0
Prupe.1G095700 Prunus persica HOM05D004960 ORTHO05D004696 1.3e-06 58.2 285 26.3
HanXRQChr16g0510881 Helianthus annuus HOM05D001062 ORTHO05D000884 1.7e-06 57.8 289 23.5
PGR044G0276 Punica granatum HOM05D001062 ORTHO05D000884 2.2e-06 57.4 292 22.3
Solyc07g006420.1 Solanum lycopersicum HOM05D004960 ORTHO05D004696 2.2e-06 57.4 285 26.0
HanXRQChr03g0074111 Helianthus annuus HOM05D012567 ORTHO05D004696 3.8e-06 56.6 303 22.4
ClCG08G002770 Citrullus lanatus HOM05D001062 ORTHO05D000884 4.9e-06 56.2 295 24.1
Dinv41298 Davidia involucrata HOM05D004960 ORTHO05D004696 4.9e-06 56.2 115 30.4
HanXRQChr03g0074151 Helianthus annuus HOM05D012567 ORTHO05D004696 4.9e-06 56.2 303 22.4
Duzib168G0188 Durio zibethinus HOM05D004960 ORTHO05D004696 6.5e-06 55.8 282 24.5
Glyma.04G242400 Glycine max HOM05D001062 ORTHO05D000884 8.4e-06 55.5 289 24.9
Gohir.D05G242200 Gossypium hirsutum HOM05D001062 ORTHO05D000884 8.4e-06 55.5 285 21.4
Sed0003865 Sechium edule HOM05D001062 ORTHO05D000884 8.4e-06 55.5 293 25.6
TAR381G1261 Trochodendron aralioides HOM05D001062 ORTHO05D000884 8.4e-06 55.5 289 24.9


User provided reference genes

Program Settings