Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 8.0e-211 736.9 381 100.0
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.2e-209 733.0 380 99.5
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 3.1e-170 602.1 379 82.6
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 4.4e-169 598.2 434 74.4
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 1.3e-168 596.7 381 81.6
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 2.9e-168 595.5 380 81.1
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 8.3e-168 594.0 381 79.8
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 2.3e-165 585.9 382 78.8
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 1.9e-164 582.8 381 78.2
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 1.9e-164 582.8 381 78.5
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 2.8e-163 578.9 381 78.2
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 2.4e-162 575.9 381 77.4
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 2.4e-162 575.9 381 76.4
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 2.4e-162 575.9 381 76.4
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 5.2e-162 574.7 381 76.4
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 1.2e-161 573.5 379 77.0
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 4.4e-161 571.6 382 77.7
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 2.2e-160 569.3 379 76.5
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 3.8e-160 568.5 381 75.9
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 6.4e-160 567.8 380 76.8
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 6.4e-160 567.8 381 76.9
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 2.4e-159 565.8 381 75.6
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 4.2e-159 565.1 381 76.4
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 5.4e-159 564.7 381 74.3
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 9.2e-159 563.9 382 77.0
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 1.2e-158 563.5 381 76.1
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 1.2e-158 563.5 382 75.9
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 2.7e-158 562.4 364 81.3
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 3.5e-158 562.0 382 76.2
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 3.5e-158 562.0 382 77.0
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 7.8e-158 560.8 409 71.1
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 1.3e-157 560.1 381 75.3
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 1.7e-157 559.7 381 76.1
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 2.3e-157 559.3 381 76.1
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 1.1e-156 557.0 381 75.9
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 3.3e-156 555.4 385 75.6
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 4.3e-156 555.1 391 76.0
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 4.3e-156 555.1 382 74.1
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 7.3e-156 554.3 381 74.8
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 7.3e-156 554.3 385 75.1
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 9.6e-156 553.9 381 75.1
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 3.6e-155 552.0 405 71.4
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 3.6e-155 552.0 381 73.5
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 4.7e-155 551.6 411 70.6
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 4.7e-155 551.6 382 74.1
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 6.2e-155 551.2 382 74.1
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 2.4e-154 549.3 381 73.8
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 2.4e-154 549.3 406 70.4
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 6.9e-154 547.7 434 70.3
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 6.9e-154 547.7 382 73.6
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 6.9e-154 547.7 385 73.0
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 6.9e-154 547.7 381 73.5
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 9.0e-154 547.4 401 71.8
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 9.9e-153 543.9 381 75.1
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 3.8e-152 542.0 382 74.3
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 3.8e-152 542.0 385 74.5
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 3.8e-152 542.0 436 67.7
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 4.2e-151 538.5 381 73.8
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.1e-150 536.2 389 70.2
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 7.8e-150 534.3 386 72.8
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 2.3e-149 532.7 381 70.9
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 2.3e-149 532.7 381 71.4
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 1.1e-148 530.4 381 71.9
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 7.3e-148 527.7 381 70.6
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 2.1e-147 526.2 381 72.7
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.1e-146 522.3 381 70.3
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 3.1e-146 522.3 375 71.2
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 5.3e-146 521.5 381 70.3
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 2.0e-145 519.6 382 70.7
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 4.5e-145 518.5 381 69.6
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 4.5e-145 518.5 358 75.7
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 9.9e-145 517.3 381 69.8
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 2.2e-144 516.2 381 69.6
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 8.4e-144 514.2 379 69.4
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 3.2e-143 512.3 388 69.1
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 7.1e-143 511.1 388 69.3
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 2.1e-142 509.6 381 68.5
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 6.0e-142 508.1 384 68.5
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 7.9e-142 507.7 377 69.0
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 1.8e-141 506.5 381 68.2
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 3.9e-141 505.4 381 68.5
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 1.9e-140 503.1 381 68.2
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.5e-140 502.7 410 64.9
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 4.3e-140 501.9 381 68.2
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 5.6e-140 501.5 382 68.1
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 2.8e-139 499.2 381 67.5
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 4.8e-139 498.4 381 67.5
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 4.8e-139 498.4 381 67.5
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.9e-136 489.2 381 66.1
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 2.9e-136 489.2 331 75.8
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 8.4e-136 487.6 400 64.2
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 8.4e-136 487.6 390 67.2
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 1.6e-134 483.4 461 57.3
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 3.3e-132 475.7 381 65.1
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 2.4e-130 469.5 384 64.3
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 5.3e-130 468.4 326 72.4
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 2.6e-129 466.1 276 87.7
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 2.6e-129 466.1 386 64.8
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.9e-128 462.6 381 65.1
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 2.4e-122 443.0 384 62.8
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 2.0e-121 439.9 384 63.0
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 2.1e-118 429.9 413 57.4
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 1.2e-110 404.1 393 58.0
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 3.0e-109 399.4 389 56.6
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 8.8e-109 397.9 277 74.4
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 5.2e-77 292.4 245 63.7
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 2.0e-73 280.4 417 42.2
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 2.4e-66 256.9 456 36.0
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 4.4e-60 236.1 158 72.8
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 9.8e-60 235.0 161 72.0
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.1e-58 231.5 158 72.2
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 4.6e-49 199.5 347 39.2
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.5e-47 193.7 148 68.2
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.2e-46 191.4 161 61.5
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.6e-44 183.7 137 68.6
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 4.2e-42 176.4 127 72.4
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 1.2e-41 174.9 140 59.3
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 1.8e-37 161.0 109 77.1
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 2.0e-36 157.5 104 74.0
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 5.6e-31 139.4 105 65.7
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.8e-27 126.7 95 70.5
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 3.5e-25 120.2 85 70.6
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 1.4e-10 71.6 124 36.3
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 2.5e-10 70.9 165 32.1
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 1.0e-08 65.5 39 79.5
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 2.3e-08 64.3 39 76.9
Lj9A174G23 Lonicera japonica HOM05D002866 ORTHO05D234197 1.1e-07 62.0 116 39.7
Cfa026867 Carpinus fangiana HOM05D000892 ORTHO05D005341 3.3e-07 60.5 146 28.1
Lsat_1_v5_gn_9_20721 Lactuca sativa HOM05D000892 ORTHO05D000750 3.7e-06 57.0 159 28.9
HanXRQChr08g0229831 Helianthus annuus HOM05D000892 ORTHO05D000750 6.3e-06 56.2 159 28.9
Lj9C161T2 Lonicera japonica HOM05D002866 ORTHO05D234048 6.3e-06 56.2 116 37.9
QL01p012113 Quercus lobata HOM05D000892 ORTHO05D000750 6.3e-06 56.2 159 28.9


User provided reference genes

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