Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 4.7e-120 434.5 213 100.0
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 7.1e-116 420.6 213 97.2
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 5.3e-87 324.7 213 79.3
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 9.3e-84 313.9 212 76.4
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 2.0e-78 296.2 206 74.8
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 2.0e-78 296.2 213 71.4
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 2.9e-77 292.4 217 71.0
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 3.2e-76 288.9 213 69.0
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 5.5e-76 288.1 213 66.7
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 9.3e-76 287.3 217 69.1
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 1.5e-73 280.0 215 67.9
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 1.5e-73 280.0 218 67.4
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 7.4e-73 277.7 170 78.8
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 9.7e-73 277.3 215 67.4
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 1.3e-72 276.9 172 78.5
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.6e-72 276.6 219 65.3
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 2.2e-72 276.2 203 69.5
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 3.7e-72 275.4 219 66.2
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 4.8e-72 275.0 216 61.6
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 4.8e-72 275.0 219 66.2
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 8.2e-72 274.2 215 66.5
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 1.8e-71 273.1 176 76.7
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 3.1e-71 272.3 215 65.6
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 1.5e-70 270.0 213 66.7
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 1.5e-70 270.0 221 64.3
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 2.0e-70 269.6 184 71.2
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 3.4e-70 268.9 220 64.1
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 3.4e-70 268.9 170 77.1
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 7.7e-70 267.7 214 68.2
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 1.0e-69 267.3 217 65.4
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 1.3e-69 266.9 166 76.5
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 2.2e-69 266.2 213 65.7
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 2.2e-69 266.2 215 65.1
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 5.0e-69 265.0 223 63.2
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 6.5e-69 264.6 214 67.8
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 1.9e-68 263.1 219 62.1
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.9e-68 263.1 193 69.4
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.9e-68 263.1 193 69.4
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 1.9e-68 263.1 216 61.6
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 7.2e-68 261.2 218 61.0
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 7.2e-68 261.2 214 66.4
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 1.2e-67 260.4 172 72.1
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 1.2e-67 260.4 172 72.1
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 1.2e-67 260.4 219 62.6
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 1.2e-67 260.4 217 61.8
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 7.9e-67 257.7 216 60.6
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 7.9e-67 257.7 215 60.9
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 7.9e-67 257.7 216 59.3
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 2.3e-66 256.1 190 66.3
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 3.0e-66 255.8 236 60.2
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 3.9e-66 255.4 171 72.5
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 3.9e-66 255.4 207 65.7
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 3.9e-66 255.4 213 62.9
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 3.9e-66 255.4 201 63.7
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 6.7e-66 254.6 214 63.1
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 8.8e-66 254.2 173 71.1
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 1.5e-65 253.4 191 67.5
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 2.5e-65 252.7 177 67.2
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 3.3e-65 252.3 213 64.3
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 3.3e-65 252.3 213 59.2
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 5.7e-65 251.5 218 60.6
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 5.7e-65 251.5 213 61.5
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 5.7e-65 251.5 200 68.0
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 5.7e-65 251.5 207 62.3
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 1.3e-64 250.4 169 71.6
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 1.7e-64 250.0 200 62.5
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 3.7e-64 248.8 183 63.9
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 1.1e-63 247.3 205 65.4
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 4.1e-63 245.4 208 60.1
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 6.9e-63 244.6 178 66.3
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 9.1e-63 244.2 199 63.8
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 1.5e-62 243.4 215 58.1
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 2.0e-62 243.0 179 67.0
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 3.4e-62 242.3 224 54.9
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 5.9e-62 241.5 178 66.9
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 1.0e-61 240.7 181 65.2
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 1.3e-61 240.4 169 66.3
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 3.8e-61 238.8 197 62.9
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 5.0e-61 238.4 169 65.7
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 1.9e-60 236.5 222 54.1
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 1.9e-60 236.5 178 65.7
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 1.9e-60 236.5 178 65.7
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 1.9e-60 236.5 178 65.7
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 1.9e-60 236.5 192 60.4
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 9.4e-60 234.2 174 66.1
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 2.1e-59 233.0 178 64.0
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 2.7e-59 232.6 158 71.5
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 6.1e-59 231.5 178 64.0
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 7.9e-59 231.1 231 56.3
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 3.0e-58 229.2 181 64.1
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 8.8e-58 227.6 179 63.7
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 2.0e-57 226.5 126 88.9
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 2.0e-57 226.5 142 71.8
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 7.4e-57 224.6 231 54.1
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 3.7e-56 222.2 232 54.3
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 4.8e-56 221.9 164 66.5
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 3.1e-55 219.2 125 80.8
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 7.0e-55 218.0 145 70.3
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 2.6e-54 216.1 170 64.1
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 1.0e-53 214.2 138 72.5
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 6.1e-51 204.9 129 75.2
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 2.3e-50 203.0 175 60.6
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 1.1e-49 200.7 136 65.4
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 5.3e-47 191.8 127 70.9
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 9.1e-47 191.0 153 53.6
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 4.5e-46 188.7 159 66.7
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 4.5e-46 188.7 159 66.7
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 6.5e-45 184.9 136 61.8
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 6.8e-42 174.9 138 67.4
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 1.2e-41 174.1 111 69.4
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 4.1e-39 165.6 174 51.1
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 3.4e-33 146.0 139 59.7
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 3.7e-32 142.5 140 55.7
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 1.8e-31 140.2 91 74.7
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 1.8e-31 140.2 82 82.9
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 9.2e-31 137.9 144 53.5
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 3.5e-30 136.0 80 80.0
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 8.6e-29 131.3 128 44.5
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 1.1e-28 131.0 131 45.8
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 8.0e-27 124.8 122 46.7
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 4.4e-25 119.0 101 61.4
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 9.8e-17 91.3 114 36.0
TPR.G22672 Trifolium pratense HOM05D006272 ORTHO05D007989 1.1e-07 61.2 38 65.8
vmacro22872 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 7.1e-07 58.5 36 75.0


User provided reference genes

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