Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019591 Camellia sinensis var. sinensis HOM05D008618 ORTHO05D010393 1.3e-38 162.5 82 100.0
Rhsim03G0215100 Rhododendron simsii HOM05D008618 ORTHO05D010393 7.6e-18 93.6 77 61.0
Dinv29214 Davidia involucrata HOM05D008618 ORTHO05D010393 1.0e-17 93.2 77 64.9
vmacro06440 Vaccinium macrocarpon HOM05D008618 ORTHO05D010393 1.3e-17 92.8 77 58.4
Actinidia34266 Actinidia chinensis HOM05D008618 ORTHO05D010393 6.5e-17 90.5 80 63.8
Hma1.2p1_0094F.1_g047330 Hydrangea macrophylla HOM05D008618 ORTHO05D010393 6.5e-17 90.5 77 62.3
Hma1.2p1_0094F.1_g047336 Hydrangea macrophylla HOM05D008618 ORTHO05D010393 6.5e-17 90.5 77 62.3
Haze_00293 Corylus avellana HOM05D008618 ORTHO05D010393 4.3e-13 77.8 78 52.6
FvH4_7g32870 Fragaria vesca HOM05D008618 ORTHO05D010393 2.8e-12 75.1 79 51.9
FAN10G0741 Fragaria x ananassa HOM05D008618 ORTHO05D010393 2.8e-12 75.1 79 51.9
FAN10G2254 Fragaria x ananassa HOM05D008618 ORTHO05D010393 2.8e-12 75.1 79 51.9
Cfa016164 Carpinus fangiana HOM05D008618 ORTHO05D010393 6.9e-11 70.5 78 51.3
Oeu061027.1 Olea europaea HOM05D008618 ORTHO05D010393 1.5e-10 69.3 78 50.0
QL09p007223 Quercus lobata HOM05D008618 ORTHO05D010393 1.5e-10 69.3 78 50.0
RcHm_v2.0_Chr1g0382821 Rosa chinensis HOM05D008618 ORTHO05D010393 7.6e-10 67.0 70 51.4
CiPaw.02G048200 Carya illinoinensis HOM05D008618 ORTHO05D010393 1.0e-09 66.6 78 50.0
Manes.01G042900 Manihot esculenta HOM05D008618 ORTHO05D010393 1.3e-09 66.2 70 42.9
Thecc.03G208200 Theobroma cacao HOM05D008618 ORTHO05D010393 1.7e-09 65.9 79 49.4
MD07G1298600 Malus domestica HOM05D008618 ORTHO05D010393 3.8e-09 64.7 65 53.8
Aqoxy7G00591 Aquilegia oxysepala HOM05D008618 ORTHO05D010393 1.1e-08 63.2 67 50.7
TAR623G0439 Trochodendron aralioides HOM05D008618 ORTHO05D010393 1.4e-08 62.8 77 42.9
TAR629G1218 Trochodendron aralioides HOM05D008618 ORTHO05D010393 1.9e-08 62.4 77 45.5
TAR623G0113 Trochodendron aralioides HOM05D008618 ORTHO05D010393 3.2e-08 61.6 77 41.6
Gohir.D09G181766 Gossypium hirsutum HOM05D008618 ORTHO05D010393 4.2e-08 61.2 80 48.8
Gorai.006G203700 Gossypium raimondii HOM05D008618 ORTHO05D010393 4.2e-08 61.2 80 48.8
Sabra15G0003400 Salix brachista HOM05D008618 ORTHO05D010393 4.2e-08 61.2 77 45.5
CiPaw.06G041500 Carya illinoinensis HOM05D008618 ORTHO05D010393 5.5e-08 60.8 77 46.8
Glyma.06G136100 Glycine max HOM05D008618 ORTHO05D010393 1.2e-07 59.7 69 50.7
Gohir.A09G186833 Gossypium hirsutum HOM05D008618 ORTHO05D010393 1.2e-07 59.7 78 47.4
MBI12_g34834_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 1.6e-07 59.3 69 44.9
MBI12_g34833_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 2.7e-07 58.5 69 44.9
Nn3g18880 Nelumbo nucifera HOM05D008618 ORTHO05D010393 2.7e-07 58.5 77 42.9
MBI12_g02805_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 4.6e-07 57.8 70 44.3
Potri.012G021500 Populus trichocarpa HOM05D008618 ORTHO05D010393 7.9e-07 57.0 77 41.6
VMungo1309G1433 Vigna mungo HOM05D008618 ORTHO05D010393 1.0e-06 56.6 78 48.7
GSVIVG01038639001 Vitis vinifera HOM05D008618 ORTHO05D010393 1.3e-06 56.2 79 45.6
Gohir.A12G246600 Gossypium hirsutum HOM05D008618 ORTHO05D010393 2.3e-06 55.5 66 47.0
Gorai.008G265300 Gossypium raimondii HOM05D008618 ORTHO05D010393 2.3e-06 55.5 66 47.0
Potri.015G004900 Populus trichocarpa HOM05D008618 ORTHO05D010393 3.9e-06 54.7 46 52.2
Gohir.D12G247300 Gossypium hirsutum HOM05D008618 ORTHO05D010393 6.7e-06 53.9 66 45.5
MBI12_g20135_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 8.7e-06 53.5 66 42.4


User provided reference genes

Program Settings