Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019580 Camellia sinensis var. sinensis HOM05D007147 ORTHO05D009166 1.2e-112 409.8 201 100.0
CSS0004376 Camellia sinensis var. sinensis HOM05D007147 ORTHO05D009166 1.5e-54 216.9 236 55.1
Rhsim11G0172700 Rhododendron simsii HOM05D007147 ORTHO05D009166 5.6e-46 188.3 209 51.7
Dinv42097 Davidia involucrata HOM05D007147 ORTHO05D009166 3.6e-45 185.7 190 54.2
vmacro02149 Vaccinium macrocarpon HOM05D007147 ORTHO05D009166 3.6e-45 185.7 236 47.0
Eucgr.I01240 Eucalyptus grandis HOM05D007147 ORTHO05D009166 4.7e-45 185.3 212 50.5
Actinidia00494 Actinidia chinensis HOM05D007147 ORTHO05D009166 4.0e-44 182.2 219 49.3
RcHm_v2.0_Chr6g0262271 Rosa chinensis HOM05D007147 ORTHO05D009166 5.2e-44 181.8 219 48.4
Sabra04G0100000 Salix brachista HOM05D007147 ORTHO05D009166 1.2e-43 180.6 192 51.0
Nn1g05127 Nelumbo nucifera HOM05D007147 ORTHO05D009166 2.0e-43 179.9 192 52.1
GSVIVG01031905001 Vitis vinifera HOM05D007147 ORTHO05D009166 2.0e-43 179.9 196 50.5
CiPaw.05G060500 Carya illinoinensis HOM05D007147 ORTHO05D009166 2.6e-43 179.5 211 48.8
MD10G1083300 Malus domestica HOM05D007147 ORTHO05D009166 2.6e-43 179.5 219 48.4
Cpa.g.sc62.102 Carica papaya HOM05D007147 ORTHO05D009166 5.8e-43 178.3 147 61.9
Duzib132G1016 Durio zibethinus HOM05D007147 ORTHO05D009166 7.5e-43 177.9 194 49.5
SalBow6G2891 Salvia bowleyana HOM05D007147 ORTHO05D009166 1.3e-42 177.2 180 51.7
Aa31LG2G16250 Aethionema arabicum HOM05D007147 ORTHO05D009166 1.7e-42 176.8 150 60.0
Haze_02425 Corylus avellana HOM05D007147 ORTHO05D009166 2.2e-42 176.4 150 59.3
Potri.004G150200 Populus trichocarpa HOM05D007147 ORTHO05D009166 2.2e-42 176.4 150 59.3
TWI31G1240 Tripterygium wilfordii HOM05D007147 ORTHO05D009166 2.2e-42 176.4 192 50.5
MBI16_g13157_MAGBIO Magnolia biondii HOM05D007147 ORTHO05D009166 3.7e-42 175.6 158 57.0
QL11p040099 Quercus lobata HOM05D007147 ORTHO05D009166 3.7e-42 175.6 159 59.1
Migut.B00275 Erythranthe guttata HOM05D007147 ORTHO05D009166 4.9e-42 175.3 192 51.6
PGR142G1778 Punica granatum HOM05D007147 ORTHO05D009166 4.9e-42 175.3 212 48.1
FAN27G2577 Fragaria x ananassa HOM05D007147 ORTHO05D009166 1.1e-41 174.1 240 45.8
FvH4_2g07850 Fragaria vesca HOM05D007147 ORTHO05D009166 1.4e-41 173.7 240 44.6
FAN20G1128 Fragaria x ananassa HOM05D007147 ORTHO05D009166 1.4e-41 173.7 245 44.9
Thecc.02G121100 Theobroma cacao HOM05D007147 ORTHO05D009166 1.4e-41 173.7 194 51.0
DCAR_022090 Daucus carota HOM05D005785 ORTHO05D009166 1.9e-41 173.3 192 50.0
THA.LOC104804359 Tarenaya hassleriana HOM05D007147 ORTHO05D009166 1.9e-41 173.3 219 47.5
Gorai.012G146900 Gossypium raimondii HOM05D007147 ORTHO05D009166 2.4e-41 172.9 192 50.0
CAN.G322.104 Capsicum annuum HOM05D007147 ORTHO05D009166 5.4e-41 171.8 192 51.0
Gohir.D04G159500 Gossypium hirsutum HOM05D007147 ORTHO05D009166 5.4e-41 171.8 192 49.5
PGSC0003DMG400025179 Solanum tuberosum HOM05D007147 ORTHO05D009166 5.4e-41 171.8 194 49.5
Manes.15G147500 Manihot esculenta HOM05D007147 ORTHO05D009166 1.2e-40 170.6 236 42.8
Solyc01g109290.3 Solanum lycopersicum HOM05D007147 ORTHO05D009166 1.2e-40 170.6 215 47.9
Thhalv10026003m.g Eutrema salsugineum HOM05D007147 ORTHO05D009166 1.6e-40 170.2 192 51.0
Gohir.A04G117800 Gossypium hirsutum HOM05D007147 ORTHO05D009166 1.6e-40 170.2 194 49.0
Sopen01g051470 Solanum pennellii HOM05D007147 ORTHO05D009166 2.1e-40 169.9 192 50.0
BraA01t00396Z Brassica rapa HOM05D007147 ORTHO05D009166 3.5e-40 169.1 194 47.4
Ciclev10029097m.g Citrus clementina HOM05D007147 ORTHO05D009166 3.5e-40 169.1 229 44.1
Cc02_g17980 Coffea canephora HOM05D007147 ORTHO05D009166 3.5e-40 169.1 192 49.0
AL7G16910 Arabidopsis lyrata HOM05D007147 ORTHO05D009166 4.6e-40 168.7 219 45.7
CARHR242410 Cardamine hirsuta HOM05D007147 ORTHO05D009166 4.6e-40 168.7 220 45.5
Atru.chr5.2922 Acer truncatum HOM05D007147 ORTHO05D009166 6.0e-40 168.3 192 51.6
Lj9A365G69 Lonicera japonica HOM05D007147 ORTHO05D009166 6.0e-40 168.3 192 46.9
AT4G34360 Arabidopsis thaliana HOM05D007147 ORTHO05D009166 7.8e-40 167.9 192 49.5
FAN24G1629 Fragaria x ananassa HOM05D007147 ORTHO05D009166 7.8e-40 167.9 210 47.6
BolC1t00429H Brassica oleracea HOM05D007147 ORTHO05D009166 1.0e-39 167.5 194 46.9
Nitab4.5_0004280g0130 Nicotiana tabacum HOM05D007147 ORTHO05D009166 1.0e-39 167.5 213 47.9
ClCG02G005360 Citrullus lanatus HOM05D005785 ORTHO05D009166 1.3e-39 167.2 219 47.5
C01p04440 Brassica napus HOM05D007147 ORTHO05D009166 1.7e-39 166.8 194 46.4
ECA236G2314 Erigeron canadensis HOM05D007147 ORTHO05D009166 1.7e-39 166.8 194 47.9
CANSAT11G2593 Cannabis sativa HOM05D007147 ORTHO05D009166 2.3e-39 166.4 211 48.3
Peaxi162Scf00016g01041 Petunia axillaris HOM05D007147 ORTHO05D009166 3.0e-39 166.0 192 50.5
FAN15G2211 Fragaria x ananassa HOM05D007147 ORTHO05D009166 1.1e-38 164.1 177 52.0
Glyma.11G121200 Glycine max HOM05D007147 ORTHO05D009166 1.1e-38 164.1 177 48.0
MELO3C018408.2 Cucumis melo HOM05D007147 ORTHO05D009166 1.9e-38 163.3 219 46.6
SGA_v2.0_scaffold58G20579 Striga asiatica HOM05D007147 ORTHO05D009166 1.9e-38 163.3 219 44.3
Nitab4.5_0003816g0060 Nicotiana tabacum HOM05D007147 ORTHO05D009166 3.3e-38 162.5 234 43.6
VMungo1127G1103 Vigna mungo HOM05D007147 ORTHO05D009166 3.3e-38 162.5 177 48.0
Carub.0007s0597 Capsella rubella HOM05D007147 ORTHO05D009166 4.3e-38 162.2 192 46.4
Lsat_1_v5_gn_7_89880 Lactuca sativa HOM05D007147 ORTHO05D009166 9.5e-38 161.0 221 44.3
Phvul.011G048100 Phaseolus vulgaris HOM05D007147 ORTHO05D009166 9.5e-38 161.0 177 48.0
unitig_21.g20771 Utricularia gibba HOM05D007147 ORTHO05D009166 1.2e-37 160.6 192 48.4
HanXRQChr15g0490561 Helianthus annuus HOM05D007147 ORTHO05D009166 2.1e-37 159.8 190 48.4
Lalb_Chr01g0002781 Lupinus albus HOM05D007147 ORTHO05D009166 3.6e-37 159.1 212 42.9
Psat7g185440 Pisum sativum HOM05D007147 ORTHO05D009166 1.8e-36 156.8 177 45.8
SEGI_35081 Sequoiadendron giganteum HOM05D007147 ORTHO05D009166 2.3e-36 156.4 245 40.4
Aqoxy5G01730 Aquilegia oxysepala HOM05D007147 ORTHO05D009166 3.1e-36 156.0 150 52.0
Medtr4g068950 Medicago truncatula HOM05D007147 ORTHO05D009166 4.0e-36 155.6 177 45.8
Sp7g32150 Schrenkiella parvula HOM05D007147 ORTHO05D009166 8.9e-36 154.5 185 45.9
AUR62016685 Chenopodium quinoa HOM05D007147 ORTHO05D009166 3.4e-35 152.5 219 43.8
arahy.Tifrunner.gnm1.ann1.ZC4AM7 Arachis hypogaea HOM05D007147 ORTHO05D009166 4.4e-35 152.1 150 50.7
Lj3g0019789 Lotus japonicus HOM05D007147 ORTHO05D009166 2.9e-34 149.4 177 45.8
Ca_20840_v3 Cicer arietinum L. HOM05D007147 ORTHO05D009166 3.7e-34 149.1 195 43.1
AUR62011017 Chenopodium quinoa HOM05D007147 ORTHO05D009166 1.1e-33 147.5 220 43.2
Ah.01g019690 Amaranthus hybridus HOM05D007147 ORTHO05D009166 7.1e-33 144.8 182 45.1
TPR.G20354 Trifolium pratense HOM05D007147 ORTHO05D009166 7.1e-33 144.8 177 46.3
Hund00292 Selenicereus undatus HOM05D007147 ORTHO05D009166 1.6e-32 143.7 147 51.0
Hund00299 Selenicereus undatus HOM05D007147 ORTHO05D009166 2.7e-32 142.9 147 51.0
AUR62027458 Chenopodium quinoa HOM05D007147 ORTHO05D009166 6.0e-32 141.7 177 45.8
Os11g0557700 Oryza sativa ssp. japonica HOM05D007147 ORTHO05D009166 8.9e-28 127.9 178 41.6
HPP92_027474 Vanilla planifolia HOM05D007147 ORTHO05D009166 1.5e-27 127.1 152 45.4
AagrBONN_evm.TU.Sc2ySwM_369.500 Anthoceros agrestis HOM05D007147 ORTHO05D009166 1.7e-26 123.6 192 39.6
COL.COLO4_32471 Corchorus olitorius HOM05D007147 ORTHO05D009166 3.8e-26 122.5 71 81.7
Zm00001eb201910 Zea mays HOM05D007147 ORTHO05D009166 3.2e-25 119.4 242 33.5
CsaV3_7G010260 Cucumis sativus L. HOM05D007147 ORTHO05D009166 1.2e-24 117.5 149 46.3
AUR62000942 Chenopodium quinoa HOM05D007147 ORTHO05D009166 1.6e-24 117.1 159 43.4
SMO118G0172 Selaginella moellendorffii HOM05D007147 ORTHO05D009166 2.3e-23 113.2 169 39.1
Sed0002261 Sechium edule HOM05D007147 ORTHO05D009166 3.9e-23 112.5 113 57.5
Mapoly0071s0019 Marchantia polymorpha HOM05D007147 ORTHO05D009166 6.6e-23 111.7 194 36.1
Pp3c5_4770 Physcomitrium patens HOM05D007147 ORTHO05D009166 8.7e-23 111.3 168 40.5
SMO222G0013 Selaginella moellendorffii HOM05D007147 ORTHO05D009166 1.2e-21 107.5 138 41.3
AUR62039986 Chenopodium quinoa HOM05D007147 ORTHO05D009166 1.4e-20 104.0 140 44.3
Sc18g0004730 Simmondsia chinensis HOM05D007147 ORTHO05D009166 5.3e-20 102.1 113 51.3
ATR0733G027 Amborella trichopoda HOM05D007147 ORTHO05D009166 3.4e-19 99.4 110 52.7
AUR62011374 Chenopodium quinoa HOM05D007147 ORTHO05D009166 5.8e-19 98.6 112 45.5
Prupe.8G106400 Prunus persica HOM05D007147 ORTHO05D009166 3.9e-15 85.9 65 60.0
Oeu021890.1 Olea europaea HOM05D007147 ORTHO05D009166 1.3e-13 80.9 40 80.0
Glyma.12G046300 Glycine max HOM05D007147 ORTHO05D009166 3.6e-13 79.3 47 70.2
BcaNung05032 Brassica carinata HOM05D007147 ORTHO05D009166 3.1e-12 76.3 40 75.0
TAR381G1422 Trochodendron aralioides HOM05D007147 ORTHO05D009166 4.0e-12 75.9 95 46.3
Sabra09G0085000 Salix brachista HOM05D007147 ORTHO05D009166 6.0e-08 62.0 41 68.3
CDE02G0683 Ceratophyllum demersum HOM05D007147 ORTHO05D009166 3.9e-07 59.3 40 67.5
Sopen01g051480 Solanum pennellii HOM05D007147 ORTHO05D009166 5.6e-06 55.5 72 48.6
Eucgr.G03283 Eucalyptus grandis HOM05D002688 ORTHO05D002911 9.6e-06 54.7 113 31.9


User provided reference genes

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