Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019542 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 5.1e-95 351.3 206 100.0
CSS0009415 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 7.9e-56 221.1 132 86.4
Actinidia15201 Actinidia chinensis HOM05D006959 ORTHO05D008808 1.4e-55 220.3 212 71.7
TAR381G0659 Trochodendron aralioides HOM05D006959 ORTHO05D008808 2.4e-52 209.5 209 57.9
Manes.18G084200 Manihot esculenta HOM05D006959 ORTHO05D008808 2.6e-51 206.1 210 57.6
Lsat_1_v5_gn_1_10340 Lactuca sativa HOM05D006959 ORTHO05D008808 1.9e-49 199.9 209 54.5
Lj4A666T17 Lonicera japonica HOM05D006959 ORTHO05D008808 2.5e-49 199.5 208 56.7
Hma1.2p1_0159F.1_g070330 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 5.5e-49 198.4 211 55.9
CiPaw.16G022000 Carya illinoinensis HOM05D006959 ORTHO05D008808 9.4e-49 197.6 213 54.9
Atru.chr13.1599 Acer truncatum HOM05D006959 ORTHO05D008808 1.2e-48 197.2 210 55.7
COL.COLO4_32963 Corchorus olitorius HOM05D006959 ORTHO05D008808 1.2e-48 197.2 211 61.6
Thecc.08G134700 Theobroma cacao HOM05D006959 ORTHO05D008808 1.2e-48 197.2 211 54.5
Gohir.A05G238900 Gossypium hirsutum HOM05D006959 ORTHO05D008808 4.7e-48 195.3 214 54.2
FvH4_2g28060 Fragaria vesca HOM05D006959 ORTHO05D008808 1.0e-47 194.1 221 52.9
Lj4A663T33 Lonicera japonica HOM05D006959 ORTHO05D008808 1.8e-47 193.4 204 56.4
Cfa018414 Carpinus fangiana HOM05D006959 ORTHO05D008808 3.0e-47 192.6 215 53.0
FAN24G0315 Fragaria x ananassa HOM05D006959 ORTHO05D008808 3.0e-47 192.6 221 52.5
Gorai.009G249600 Gossypium raimondii HOM05D006959 ORTHO05D008808 3.0e-47 192.6 222 52.7
Sed0020251 Sechium edule HOM05D006959 ORTHO05D008808 4.0e-47 192.2 213 52.6
Oeu026374.1 Olea europaea HOM05D006959 ORTHO05D008808 5.2e-47 191.8 214 54.2
CSS0036249 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 6.7e-47 191.4 132 76.5
FAN27G3284 Fragaria x ananassa HOM05D006959 ORTHO05D008808 6.7e-47 191.4 221 52.5
Gohir.D05G240800 Gossypium hirsutum HOM05D006959 ORTHO05D008808 6.7e-47 191.4 222 52.3
Ciclev10002542m.g Citrus clementina HOM05D006959 ORTHO05D008808 1.5e-46 190.3 206 53.9
Cc10_g14010 Coffea canephora HOM05D006959 ORTHO05D008808 2.6e-46 189.5 202 53.0
Actinidia24726 Actinidia chinensis HOM05D006959 ORTHO05D008808 5.7e-46 188.3 145 70.3
HanXRQChr02g0045531 Helianthus annuus HOM05D006959 ORTHO05D008808 9.7e-46 187.6 204 52.9
Nn1g08935 Nelumbo nucifera HOM05D006959 ORTHO05D008808 1.3e-45 187.2 209 54.1
CsaV3_6G033990 Cucumis sativus L. HOM05D006959 ORTHO05D008808 2.8e-45 186.0 210 52.4
Duzib093G2176 Durio zibethinus HOM05D006959 ORTHO05D008808 2.8e-45 186.0 210 53.3
Potri.002G076700 Populus trichocarpa HOM05D006959 ORTHO05D008808 2.8e-45 186.0 215 54.9
MD15G1131600 Malus domestica HOM05D006959 ORTHO05D008808 8.2e-45 184.5 208 51.9
PGSC0003DMG402018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 8.2e-45 184.5 209 51.2
Glyma.13G035500 Glycine max HOM05D006959 ORTHO05D008808 1.1e-44 184.1 208 53.4
Medtr1g029720 Medicago truncatula HOM05D006959 ORTHO05D008808 1.1e-44 184.1 208 63.9
PGR042G0886 Punica granatum HOM05D006959 ORTHO05D008808 1.8e-44 183.3 221 51.6
QL09p031824 Quercus lobata HOM05D006959 ORTHO05D008808 1.8e-44 183.3 215 53.0
Migut.C01073 Erythranthe guttata HOM05D006959 ORTHO05D008808 3.1e-44 182.6 213 51.6
TWI32G1355 Tripterygium wilfordii HOM05D006959 ORTHO05D008808 3.1e-44 182.6 209 49.8
PGSC0003DMG403018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 4.1e-44 182.2 209 51.2
GSVIVG01008793001 Vitis vinifera HOM05D006959 ORTHO05D008808 4.1e-44 182.2 142 66.9
VMungo0647G0259 Vigna mungo HOM05D006959 ORTHO05D008808 5.3e-44 181.8 207 53.1
QL09p031413 Quercus lobata HOM05D006959 ORTHO05D008808 7.0e-44 181.4 215 52.6
Lj1g0023549 Lotus japonicus HOM05D006959 ORTHO05D008808 1.2e-43 180.6 212 59.4
Lalb_Chr04g0253591 Lupinus albus HOM05D006959 ORTHO05D008808 1.2e-43 180.6 206 61.7
RcHm_v2.0_Chr6g0297021 Rosa chinensis HOM05D006959 ORTHO05D008808 1.2e-43 180.6 218 49.5
Sopen04g026100 Solanum pennellii HOM05D006959 ORTHO05D008808 1.2e-43 180.6 208 49.0
Phvul.001G066600 Phaseolus vulgaris HOM05D006959 ORTHO05D008808 4.5e-43 178.7 208 51.0
Aqoxy6G00289 Aquilegia oxysepala HOM05D006959 ORTHO05D008808 1.0e-42 177.6 143 64.3
arahy.Tifrunner.gnm1.ann1.P1MCWD Arachis hypogaea HOM05D006959 ORTHO05D008808 1.0e-42 177.6 208 51.9
Eucgr.F03861 Eucalyptus grandis HOM05D006959 ORTHO05D008808 1.3e-42 177.2 220 48.6
THA.LOC104813687 Tarenaya hassleriana HOM05D006959 ORTHO05D008808 1.3e-42 177.2 216 50.0
Haze_17647 Corylus avellana HOM05D006959 ORTHO05D008808 1.7e-42 176.8 230 49.1
Hund17359 Selenicereus undatus HOM05D006959 ORTHO05D008808 1.7e-42 176.8 204 52.5
MSTRG.1406 Avicennia marina HOM05D006959 ORTHO05D008808 2.9e-42 176.0 213 49.8
AUR62007695 Chenopodium quinoa HOM05D006959 ORTHO05D008808 5.0e-42 175.3 217 50.2
CAN.G46.11 Capsicum annuum HOM05D006959 ORTHO05D008808 1.5e-41 173.7 206 50.0
Nitab4.5_0002625g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 1.5e-41 173.7 212 50.5
AUR62013448 Chenopodium quinoa HOM05D006959 ORTHO05D008808 2.5e-41 172.9 220 50.5
ClCG08G006070 Citrullus lanatus HOM05D006959 ORTHO05D008808 2.5e-41 172.9 248 44.4
MBI03_g13506_MAGBIO Magnolia biondii HOM05D006959 ORTHO05D008808 4.2e-41 172.2 222 51.8
PSO528G0249 Papaver somniferum HOM05D006959 ORTHO05D008808 7.2e-41 171.4 233 46.8
Peaxi162Scf00066g00072 Petunia axillaris HOM05D006959 ORTHO05D008808 9.4e-41 171.0 209 47.8
AL2G37400 Arabidopsis lyrata HOM05D006959 ORTHO05D008808 1.2e-40 170.6 209 49.3
Cpa.g.sc64.158 Carica papaya HOM05D006959 ORTHO05D008808 1.6e-40 170.2 206 51.9
MELO3C008461.2 Cucumis melo HOM05D006959 ORTHO05D008808 2.1e-40 169.9 224 47.3
CDE06G1932 Ceratophyllum demersum HOM05D006959 ORTHO05D008808 6.1e-40 168.3 191 50.3
Thhalv10019109m.g Eutrema salsugineum HOM05D006959 ORTHO05D008808 8.0e-40 167.9 217 47.0
AT1G77230 Arabidopsis thaliana HOM05D006959 ORTHO05D008808 1.0e-39 167.5 213 46.5
PSO170G0856 Papaver somniferum HOM05D006959 ORTHO05D008808 4.0e-39 165.6 232 46.1
CARHR070700 Cardamine hirsuta HOM05D006959 ORTHO05D008808 6.8e-39 164.9 203 46.8
BcaC08g45484 Brassica carinata HOM05D006959 ORTHO05D008808 2.0e-38 163.3 209 46.4
Carub.0002s2410 Capsella rubella HOM05D006959 ORTHO05D008808 3.4e-38 162.5 215 46.0
FAN20G3215 Fragaria x ananassa HOM05D006959 ORTHO05D008808 3.4e-38 162.5 221 48.0
Sp5g32400 Schrenkiella parvula HOM05D006959 ORTHO05D008808 4.4e-38 162.2 210 48.6
DCAR_028201 Daucus carota HOM05D006959 ORTHO05D008808 1.7e-37 160.2 207 58.5
Nitab4.5_0008327g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 1.7e-37 160.2 236 44.9
Os02g0553500 Oryza sativa ssp. japonica HOM05D006959 ORTHO05D008808 3.7e-37 159.1 205 46.3
C06p31380 Brassica napus HOM05D006959 ORTHO05D008808 4.8e-37 158.7 204 46.6
BolC6t38274H Brassica oleracea HOM05D006959 ORTHO05D008808 6.3e-37 158.3 204 46.6
Ca_12642_v3 Cicer arietinum L. HOM05D006959 ORTHO05D008808 8.3e-37 157.9 225 57.3
SalBow7G4180 Salvia bowleyana HOM05D006959 ORTHO05D008808 1.1e-36 157.5 233 44.6
ATR0584G163 Amborella trichopoda HOM05D006959 ORTHO05D008808 1.4e-36 157.1 204 54.4
A08p07140 Brassica napus HOM05D006959 ORTHO05D008808 1.8e-36 156.8 204 46.1
BraA08t32726Z Brassica rapa HOM05D006959 ORTHO05D008808 1.8e-36 156.8 204 46.1
Zm00001eb181980 Zea mays HOM05D006959 ORTHO05D008808 1.8e-36 156.8 202 46.5
CANSAT64G0796 Cannabis sativa HOM05D006959 ORTHO05D008808 4.1e-36 155.6 211 48.3
EL10Ac1g01371 Beta vulgaris HOM05D006959 ORTHO05D008808 4.5e-35 152.1 248 42.3
arahy.Tifrunner.gnm1.ann1.84IAJ5 Arachis hypogaea HOM05D006959 ORTHO05D008808 5.9e-35 151.8 131 64.1
Aa31LG4G7230 Aethionema arabicum HOM05D006959 ORTHO05D008808 1.3e-34 150.6 236 41.9
Sabra02G0060200 Salix brachista HOM05D006959 ORTHO05D008808 2.9e-34 149.4 286 42.0
HPP92_016131 Vanilla planifolia HOM05D006959 ORTHO05D008808 6.5e-34 148.3 206 43.2
BcaB02g07099 Brassica carinata HOM05D006959 ORTHO05D008808 1.6e-32 143.7 211 41.7
Hma1.2p1_0159F.1_g070340 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 1.8e-31 140.2 194 47.9
Psat6g040840 Pisum sativum HOM05D006959 ORTHO05D008808 6.8e-31 138.3 141 55.3
Glyma.14G156700 Glycine max HOM05D006959 ORTHO05D008808 4.5e-27 125.6 83 74.7
Solyc04g058200.3 Solanum lycopersicum HOM05D006959 ORTHO05D008808 1.6e-24 117.1 114 53.5
Mapoly0050s0106 Marchantia polymorpha HOM05D006959 ORTHO05D008808 8.9e-23 111.3 147 44.9
SGA_v2.0_scaffold52G18911 Striga asiatica HOM05D006959 ORTHO05D008808 1.5e-22 110.5 126 50.8
Dinv27258 Davidia involucrata HOM05D006959 ORTHO05D008808 6.0e-19 98.6 128 50.8
RcHm_v2.0_Chr6g0296981 Rosa chinensis HOM05D006959 ORTHO05D008808 1.1e-15 87.8 55 78.2
TPR.G879 Trifolium pratense HOM05D006959 ORTHO05D008808 7.5e-14 81.6 84 54.8
FAN24G1784 Fragaria x ananassa HOM05D006959 ORTHO05D008808 9.2e-12 74.7 47 70.2
Cre12.g510034 Chlamydomonas reinhardtii HOM05D006959 ORTHO05D008808 3.0e-10 69.7 80 47.5
FAN27G2285 Fragaria x ananassa HOM05D006959 ORTHO05D008808 3.9e-10 69.3 99 43.4
Prupe.1G487500 Prunus persica HOM05D006959 ORTHO05D008808 1.1e-09 67.8 202 33.2
RcHm_v2.0_Chr6g0296961 Rosa chinensis HOM05D006959 ORTHO05D008808 3.1e-07 59.7 75 44.0
Sc26g0002850 Simmondsia chinensis HOM05D006959 ORTHO05D008808 2.6e-06 56.6 211 29.4
Medtr7g059150 Medicago truncatula HOM05D003946 ORTHO05D004485 9.9e-06 54.7 88 35.2
TPR.G23301 Trifolium pratense HOM05D003946 ORTHO05D004485 9.9e-06 54.7 79 35.4


User provided reference genes

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