Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019531 Camellia sinensis var. sinensis HOM05D004810 ORTHO05D006272 0.0e+00 2152.9 1058 100.0
CSS0014565 Camellia sinensis var. sinensis HOM05D004810 ORTHO05D006272 0.0e+00 2105.5 1058 97.8
Actinidia21354 Actinidia chinensis HOM05D004810 ORTHO05D006272 0.0e+00 1670.2 1060 78.6
Rhsim13G0000700 Rhododendron simsii HOM05D004810 ORTHO05D006272 0.0e+00 1613.2 1072 75.1
QL12p034348 Quercus lobata HOM05D004810 ORTHO05D006272 0.0e+00 1297.3 1109 60.4
vmacro02367 Vaccinium macrocarpon HOM05D004810 ORTHO05D006272 0.0e+00 1291.6 875 74.3
Haze_05120 Corylus avellana HOM05D004810 ORTHO05D006272 0.0e+00 1283.9 1067 61.9
GSVIVG01028203001 Vitis vinifera HOM05D004810 ORTHO05D006272 0.0e+00 1283.5 1065 62.3
Atru.chr5.899 Acer truncatum HOM05D004810 ORTHO05D006272 0.0e+00 1281.9 1068 60.7
Cfa004881 Carpinus fangiana HOM05D004810 ORTHO05D006272 0.0e+00 1278.5 1067 61.6
Thecc.01G322600 Theobroma cacao HOM05D004810 ORTHO05D006272 0.0e+00 1238.0 1058 58.8
Ciclev10018506m.g Citrus clementina HOM05D004810 ORTHO05D006272 0.0e+00 1227.2 1068 58.6
Potri.002G189400 Populus trichocarpa HOM05D004810 ORTHO05D006272 0.0e+00 1224.5 1060 60.1
CiPaw.07G123600 Carya illinoinensis HOM05D004810 ORTHO05D006272 0.0e+00 1213.7 1072 59.0
Duzib138G1217 Durio zibethinus HOM05D004810 ORTHO05D006272 0.0e+00 1204.5 1062 58.6
COL.COLO4_23155 Corchorus olitorius HOM05D004810 ORTHO05D006272 0.0e+00 1199.1 1057 57.5
MD09G1293000 Malus domestica HOM05D004810 ORTHO05D006272 0.0e+00 1198.0 1057 59.1
TAR362G0253 Trochodendron aralioides HOM05D004810 ORTHO05D006272 0.0e+00 1192.9 1065 59.0
FvH4_1g26470 Fragaria vesca HOM05D004810 ORTHO05D006272 0.0e+00 1174.1 1058 57.8
FAN19G2038 Fragaria x ananassa HOM05D004810 ORTHO05D006272 0.0e+00 1172.5 1058 57.8
Sabra02G0166300 Salix brachista HOM05D004810 ORTHO05D006272 0.0e+00 1171.8 1143 54.9
FAN23G0904 Fragaria x ananassa HOM05D004810 ORTHO05D006272 0.0e+00 1171.0 1058 58.1
Prupe.3G004200 Prunus persica HOM05D004810 ORTHO05D006272 0.0e+00 1168.7 1056 59.3
FAN26G0889 Fragaria x ananassa HOM05D004810 ORTHO05D006272 0.0e+00 1163.7 1053 58.1
RcHm_v2.0_Chr3g0486381 Rosa chinensis HOM05D004810 ORTHO05D006272 0.0e+00 1162.1 1056 58.1
Gorai.008G136000 Gossypium raimondii HOM05D004810 ORTHO05D006272 0.0e+00 1157.9 1058 56.8
Manes.05G010600 Manihot esculenta HOM05D004810 ORTHO05D006272 0.0e+00 1157.5 1060 56.9
Gohir.A12G121200 Gossypium hirsutum HOM05D004810 ORTHO05D006272 0.0e+00 1151.7 1058 56.8
Sopen01g030000 Solanum pennellii HOM05D004810 ORTHO05D006272 0.0e+00 1144.4 1075 55.0
TWI14G1319 Tripterygium wilfordii HOM05D004810 ORTHO05D006272 0.0e+00 1143.6 1061 56.2
Nn3g21885 Nelumbo nucifera HOM05D004810 ORTHO05D006272 0.0e+00 1133.6 1060 55.3
Hma1.2p1_0484F.1_g162890 Hydrangea macrophylla HOM05D004810 ORTHO05D006272 0.0e+00 1132.9 828 68.2
Lj1g0015466 Lotus japonicus HOM05D004810 ORTHO05D006272 0.0e+00 1129.0 1058 55.4
Medtr7g110260 Medicago truncatula HOM05D004810 ORTHO05D006272 0.0e+00 1123.2 1061 55.4
Glyma.19G220100 Glycine max HOM05D004810 ORTHO05D006272 0.0e+00 1120.1 1062 55.5
Lalb_Chr04g0260131 Lupinus albus HOM05D004810 ORTHO05D006272 0.0e+00 1113.6 1056 53.9
Phvul.001G216500 Phaseolus vulgaris HOM05D004810 ORTHO05D006272 0.0e+00 1106.7 1059 54.4
TPR.G4131 Trifolium pratense HOM05D004810 ORTHO05D006272 0.0e+00 1105.9 1056 54.4
Sed0025982 Sechium edule HOM05D004810 ORTHO05D006272 0.0e+00 1101.3 1063 54.8
VMungo1383G1823 Vigna mungo HOM05D004810 ORTHO05D006272 0.0e+00 1095.9 1052 54.6
arahy.Tifrunner.gnm1.ann1.NAX4N2 Arachis hypogaea HOM05D004810 ORTHO05D006272 0.0e+00 1094.0 1056 53.6
DCAR_018250 Daucus carota HOM05D004810 ORTHO05D006272 0.0e+00 1091.3 1109 52.0
Eucgr.K00589 Eucalyptus grandis HOM05D004810 ORTHO05D006272 0.0e+00 1090.5 1057 54.3
Ca_09236_v3 Cicer arietinum L. HOM05D004810 ORTHO05D006272 0.0e+00 1089.7 1061 53.9
arahy.Tifrunner.gnm1.ann1.RS5E8T Arachis hypogaea HOM05D004810 ORTHO05D006272 0.0e+00 1089.3 1056 53.1
Cc01_g21880 Coffea canephora HOM05D004810 ORTHO05D006272 0.0e+00 1085.1 1117 52.5
Aqoxy5G02779 Aquilegia oxysepala HOM05D004810 ORTHO05D006272 0.0e+00 1080.1 1068 53.8
MSTRG.21726 Avicennia marina HOM05D004810 ORTHO05D006272 0.0e+00 1078.5 1069 53.5
CsaV3_3G031590 Cucumis sativus L. HOM05D004810 ORTHO05D006272 0.0e+00 1076.2 1064 53.0
PGR142G2149 Punica granatum HOM05D004810 ORTHO05D006272 1.4e-310 1069.7 1055 53.8
AUR62011731 Chenopodium quinoa HOM05D004810 ORTHO05D006272 3.0e-308 1062.0 1059 53.4
PSO170G6261 Papaver somniferum HOM05D004810 ORTHO05D006272 1.6e-306 1056.2 1062 52.4
EL10As5g23578 Beta vulgaris HOM05D004810 ORTHO05D006272 1.1e-305 1053.5 1062 52.9
PSO357G0647 Papaver somniferum HOM05D004810 ORTHO05D006272 4.1e-305 1051.6 1062 52.5
Sp6g01700 Schrenkiella parvula HOM05D004810 ORTHO05D006272 9.4e-302 1040.4 1061 51.7
THA.LOC104825930 Tarenaya hassleriana HOM05D004810 ORTHO05D006272 9.4e-302 1040.4 1057 51.4
Nitab4.5_0000222g0280 Nicotiana tabacum HOM05D004810 ORTHO05D006272 6.1e-301 1037.7 1067 52.6
Thhalv10027621m.g Eutrema salsugineum HOM05D004810 ORTHO05D006272 3.9e-300 1035.0 1056 50.6
Aa31LG5G1530 Aethionema arabicum HOM05D004810 ORTHO05D006272 2.0e-299 1032.7 1056 51.6
BcaB01g02106 Brassica carinata HOM05D004810 ORTHO05D006272 3.3e-299 1031.9 1060 51.9
AL6G51450 Arabidopsis lyrata HOM05D004810 ORTHO05D006272 1.3e-298 1030.0 1052 50.5
Lj2C1214G2 Lonicera japonica HOM05D004810 ORTHO05D006272 1.1e-297 1026.9 1066 53.7
Carub.0006s3538 Capsella rubella HOM05D004810 ORTHO05D006272 1.8e-297 1026.2 1056 50.7
MELO3C012913.2 Cucumis melo HOM05D004810 ORTHO05D006272 3.1e-297 1025.4 1062 52.3
Gohir.D12G125000 Gossypium hirsutum HOM05D004810 ORTHO05D006272 1.5e-296 1023.1 946 56.3
MBI18_g09625_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D006272 3.4e-296 1021.9 1052 52.4
AT4G01860 Arabidopsis thaliana HOM05D004810 ORTHO05D006272 3.8e-295 1018.5 1054 50.6
A09p01330 Brassica napus HOM05D004810 ORTHO05D006272 4.2e-294 1015.0 1062 51.5
C09p01390 Brassica napus HOM05D004810 ORTHO05D006272 5.5e-294 1014.6 1060 51.5
BraA09t35800Z Brassica rapa HOM05D004810 ORTHO05D006272 1.2e-293 1013.4 1061 51.7
BcaC04g24069 Brassica carinata HOM05D004810 ORTHO05D006272 1.1e-291 1006.9 1060 51.7
FAN28G1956 Fragaria x ananassa HOM05D004810 ORTHO05D006272 9.1e-289 997.3 1132 50.1
BolC9t53072H Brassica oleracea HOM05D004810 ORTHO05D006272 6.5e-287 991.1 1059 50.5
SGA_v2.0_scaffold80G25689 Striga asiatica HOM05D004810 ORTHO05D006272 2.7e-285 985.7 1063 50.4
HanXRQChr06g0167991 Helianthus annuus HOM05D004810 ORTHO05D006272 3.6e-285 985.3 1052 51.0
Lsat_1_v5_gn_8_167321 Lactuca sativa HOM05D004810 ORTHO05D006272 2.0e-283 979.5 1056 50.6
Psat3g018400 Pisum sativum HOM05D004810 ORTHO05D006272 1.2e-277 960.3 1059 49.3
Hund09692 Selenicereus undatus HOM05D004810 ORTHO05D006272 1.3e-274 950.3 1036 51.8
ClCG10G011790 Citrullus lanatus HOM05D004810 ORTHO05D006272 3.1e-273 945.7 1018 50.9
ATR0796G051 Amborella trichopoda HOM05D004810 ORTHO05D006272 1.6e-272 943.3 1087 48.3
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 1.8e-268 929.9 1032 50.8
Dinv12098 Davidia involucrata HOM05D004810 ORTHO05D006272 6.1e-261 904.8 636 71.7
CDE05G2014 Ceratophyllum demersum HOM05D004810 ORTHO05D006272 5.7e-259 898.3 1074 46.1
Hma1.2p1_0484F.1_g162880 Hydrangea macrophylla HOM05D004810 ORTHO05D006272 1.1e-254 884.0 634 68.0
Os03g0111800 Oryza sativa ssp. japonica HOM05D004810 ORTHO05D006272 1.8e-244 850.1 1056 45.3
HPP92_017301 Vanilla planifolia HOM05D004810 ORTHO05D006272 7.5e-243 844.7 1070 45.0
Sc18g0007580 Simmondsia chinensis HOM05D004810 ORTHO05D006272 1.6e-237 827.0 743 57.7
AUR62024565 Chenopodium quinoa HOM05D004810 ORTHO05D006272 1.7e-223 780.4 855 49.2
Oeu044753.1 Olea europaea HOM05D004810 ORTHO05D006272 1.7e-218 763.8 784 52.8
Nitab4.5_0002994g0090 Nicotiana tabacum HOM05D004810 ORTHO05D006272 4.5e-211 739.2 756 51.9
CARHR249820 Cardamine hirsuta HOM05D004810 ORTHO05D006272 1.1e-206 724.5 711 51.6
Zm00001eb404090 Zea mays HOM05D004810 ORTHO05D006272 4.0e-167 593.2 800 44.2
SEGI_19859 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 1.1e-164 585.1 755 44.1
Migut.D00025 Erythranthe guttata HOM05D004810 ORTHO05D006272 3.5e-163 580.1 653 48.9
SEGI_21204 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 1.7e-154 551.2 877 40.5
unitig_62.g23902 Utricularia gibba HOM05D004810 ORTHO05D006272 1.7e-154 551.2 1021 36.6
Mapoly0020s0127 Marchantia polymorpha HOM05D004810 ORTHO05D006272 7.2e-153 545.8 1159 32.5
Dinv12097 Davidia involucrata HOM05D004810 ORTHO05D006272 4.0e-151 540.0 390 69.7
Pp3c3_23690 Physcomitrium patens HOM05D004810 ORTHO05D006272 1.2e-150 538.5 1154 34.9
AagrBONN_evm.TU.Sc2ySwM_344.1995 Anthoceros agrestis HOM05D004810 ORTHO05D006272 4.1e-140 503.4 1141 32.6
Migut.D00026 Erythranthe guttata HOM05D004810 ORTHO05D006272 9.5e-129 465.7 391 59.6
Cpa.g.sc67.77 Carica papaya HOM05D004810 ORTHO05D006272 1.1e-111 409.1 319 63.6
SMO137G0268 Selaginella moellendorffii HOM05D004810 ORTHO05D006272 2.4e-103 381.3 1057 29.4
SHI15445 Sapria himalayana HOM05D004810 ORTHO05D006272 2.2e-101 374.8 470 46.8
MD17G1281400 Malus domestica HOM05D004810 ORTHO05D006272 2.6e-94 351.3 318 59.1
Oeu044752.1 Olea europaea HOM05D004810 ORTHO05D006272 3.8e-85 320.9 254 62.2
CANSAT21G0194 Cannabis sativa HOM05D004810 ORTHO05D006272 3.2e-84 317.8 254 62.6
SHI15448 Sapria himalayana HOM05D000105 ORTHO05D000023 2.3e-82 311.6 303 56.8
vmacro02368 Vaccinium macrocarpon HOM05D004810 ORTHO05D006272 4.3e-81 307.4 232 66.4
MD17G1281700 Malus domestica HOM05D004810 ORTHO05D006272 4.8e-72 277.3 269 57.2
Cpa.g.sc3588.1 Carica papaya HOM05D004810 ORTHO05D006272 2.0e-70 271.9 255 56.9
RcHm_v2.0_Chr3g0486501 Rosa chinensis HOM05D004810 ORTHO05D006272 4.5e-62 244.2 246 57.7
FAN10G1333 Fragaria x ananassa HOM05D004810 ORTHO05D006272 2.7e-59 235.0 257 52.1
Solyc01g068070.4 Solanum lycopersicum HOM05D004810 ORTHO05D006272 4.5e-54 217.6 203 55.2
RcHm_v2.0_Chr3g0486491 Rosa chinensis HOM05D004810 ORTHO05D006272 2.3e-50 205.3 191 53.4
CBR_g26439 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-42 179.1 703 24.9
Psat4g129960 Pisum sativum HOM05D004810 ORTHO05D006272 6.8e-42 177.2 184 48.4
Actinidia06394 Actinidia chinensis HOM05D004810 ORTHO05D006272 2.0e-41 175.6 155 58.7
MD17G1281800 Malus domestica HOM05D004810 ORTHO05D006272 2.5e-36 158.7 100 73.0
RcHm_v2.0_Chr3g0486511 Rosa chinensis HOM05D004810 ORTHO05D006272 8.9e-34 150.2 190 46.3
SEGI_39451 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 1.7e-32 146.0 151 47.0
FAN24G0870 Fragaria x ananassa HOM05D004810 ORTHO05D006272 3.7e-32 144.8 161 47.8
Psat0s2464g0040 Pisum sativum HOM05D004810 ORTHO05D006272 3.8e-29 134.8 111 53.2
SHI15443 Sapria himalayana HOM05D004810 ORTHO05D006272 1.4e-26 126.3 252 32.9
FvH4_2g08080 Fragaria vesca HOM05D004810 ORTHO05D006272 3.7e-24 118.2 130 46.9
MCO01G012 Micromonas commoda HOM05D004810 ORTHO05D006272 1.4e-23 116.3 1217 22.4
CAN.G100.30 Capsicum annuum HOM05D004810 ORTHO05D006272 3.2e-23 115.2 85 63.5
Lsat_1_v5_gn_2_51680 Lactuca sativa HOM05D004810 ORTHO05D006272 1.1e-20 106.7 115 46.1
PRCOL_00001957 Prasinoderma coloniale HOM05D004810 ORTHO05D006272 1.9e-20 105.9 609 21.3
SEGI_09896 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 2.2e-16 92.4 104 45.2
Hund09691 Selenicereus undatus HOM05D004810 ORTHO05D006272 2.4e-15 89.0 74 60.8
FvH4_6g28340 Fragaria vesca HOM05D003050 ORTHO05D006272 7.8e-14 84.0 104 47.1
MBI14_g40313_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 6.6e-13 80.9 63 68.3
MBI15_g23571_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 6.6e-13 80.9 63 68.3
MBI13_g10212_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 9.5e-12 77.0 63 66.7
MBI14_g17170_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 8.1e-11 73.9 55 72.7
FAN14G3945 Fragaria x ananassa HOM05D004810 ORTHO05D029461 1.1e-10 73.6 56 60.7
Actinidia10458 Actinidia chinensis HOM05D000038 ORTHO05D053114 3.1e-10 72.0 42 73.8
MBI19_g30553_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 3.1e-10 72.0 51 76.5
FvH4_3g18411 Fragaria vesca HOM05D004810 ORTHO05D029461 6.4e-08 64.3 63 54.0
CBR_g26440 Chara braunii HOM05D000019 ORTHO05D000048 8.3e-08 63.9 51 52.9
FvH4_6g46150 Fragaria vesca HOM05D004810 ORTHO05D029461 8.3e-08 63.9 56 55.4
MD17G1281500 Malus domestica HOM05D004810 ORTHO05D006272 1.2e-06 60.1 52 57.7
Psat0s3766g0080 Pisum sativum HOM05D002292 ORTHO05D006272 1.2e-06 60.1 32 75.0
Actinidia16142 Actinidia chinensis HOM05D002279 ORTHO05D006272 3.5e-06 58.5 29 75.9


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