Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 6.5e-54 213.8 106 100.0
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 4.7e-36 154.5 107 72.9
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 8.0e-36 153.7 103 70.9
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 9.8e-34 146.7 113 67.3
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 4.9e-33 144.4 115 61.7
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 6.4e-33 144.1 115 61.7
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 6.4e-33 144.1 115 61.7
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 8.3e-33 143.7 105 66.7
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 8.3e-33 143.7 104 67.3
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 1.8e-32 142.5 105 65.7
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 2.4e-32 142.1 104 65.4
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 2.4e-32 142.1 104 65.4
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 2.4e-32 142.1 105 65.7
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 2.4e-32 142.1 104 67.3
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 3.2e-32 141.7 108 64.8
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 9.2e-32 140.2 102 67.6
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 1.2e-31 139.8 104 68.3
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 1.2e-31 139.8 102 69.6
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 2.0e-31 139.0 106 66.0
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 2.0e-31 139.0 101 66.3
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 2.7e-31 138.7 106 63.2
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.7e-31 138.7 120 60.0
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 5.9e-31 137.5 105 63.8
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 5.9e-31 137.5 103 64.1
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 7.8e-31 137.1 112 62.5
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 1.0e-30 136.7 101 65.3
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 1.7e-30 136.0 101 67.3
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 2.3e-30 135.6 105 66.7
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 2.3e-30 135.6 101 67.3
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 3.0e-30 135.2 109 62.4
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 3.9e-30 134.8 108 61.1
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 3.9e-30 134.8 100 65.0
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 5.0e-30 134.4 104 66.3
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 5.0e-30 134.4 101 65.3
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 5.0e-30 134.4 100 65.0
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 8.6e-30 133.7 108 61.1
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 8.6e-30 133.7 108 61.1
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 8.6e-30 133.7 108 61.1
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 8.6e-30 133.7 112 61.6
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.1e-29 133.3 102 62.7
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 1.5e-29 132.9 104 62.5
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 1.5e-29 132.9 104 62.5
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 1.9e-29 132.5 101 61.4
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.5e-29 132.1 108 60.2
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 4.3e-29 131.3 110 60.9
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 4.3e-29 131.3 110 59.1
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 4.3e-29 131.3 110 59.1
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 4.3e-29 131.3 104 63.5
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 4.3e-29 131.3 103 61.2
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 7.3e-29 130.6 103 63.1
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 9.5e-29 130.2 108 60.2
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 9.5e-29 130.2 101 63.4
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 1.2e-28 129.8 103 62.1
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.2e-28 129.8 110 58.2
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 1.6e-28 129.4 103 62.1
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 1.6e-28 129.4 94 64.9
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 2.1e-28 129.0 101 61.4
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 2.8e-28 128.6 108 59.3
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 2.8e-28 128.6 101 63.4
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 3.6e-28 128.3 104 61.5
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 4.7e-28 127.9 109 59.6
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 4.7e-28 127.9 94 67.0
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 6.2e-28 127.5 105 59.0
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 6.2e-28 127.5 101 61.4
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 1.0e-27 126.7 112 57.1
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.0e-27 126.7 103 60.2
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 1.8e-27 125.9 109 57.8
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.8e-27 125.9 103 60.2
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.3e-27 125.6 108 59.3
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 3.1e-27 125.2 106 60.4
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 6.8e-27 124.0 105 62.9
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 8.9e-27 123.6 113 54.9
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 1.2e-26 123.2 105 59.0
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 1.2e-26 123.2 106 59.4
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 1.5e-26 122.9 104 56.7
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 2.0e-26 122.5 106 58.5
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 4.4e-26 121.3 111 56.8
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 9.8e-26 120.2 94 63.8
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 9.8e-26 120.2 104 59.6
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 1.3e-25 119.8 117 53.0
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 2.2e-25 119.0 116 53.4
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 2.2e-25 119.0 119 52.1
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 2.2e-25 119.0 111 56.8
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.9e-25 118.6 106 57.5
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 3.7e-25 118.2 119 52.1
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 3.7e-25 118.2 107 57.9
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 4.9e-25 117.9 119 52.9
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 4.9e-25 117.9 119 52.9
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 4.9e-25 117.9 119 52.9
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 6.4e-25 117.5 119 52.1
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 1.4e-24 116.3 122 50.8
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 1.4e-24 116.3 117 52.1
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 1.9e-24 115.9 110 55.5
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 2.4e-24 115.5 111 52.3
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 3.2e-24 115.2 119 51.3
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 4.1e-24 114.8 110 53.6
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 9.2e-24 113.6 113 51.3
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 1.2e-23 113.2 106 56.6
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 1.6e-23 112.8 97 57.7
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 1.6e-23 112.8 113 54.9
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.7e-23 112.1 115 53.0
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 3.5e-23 111.7 117 49.6
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.0e-22 110.2 104 54.8
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 1.3e-22 109.8 120 48.3
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 1.3e-22 109.8 104 54.8
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 1.3e-22 109.8 111 46.8
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.7e-22 109.4 105 55.2
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 2.3e-22 109.0 117 47.0
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 2.3e-22 109.0 105 54.3
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 5.0e-22 107.8 109 53.2
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 1.1e-21 106.7 105 51.4
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 1.1e-21 106.7 94 57.4
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 5.6e-21 104.4 113 48.7
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 7.3e-21 104.0 104 51.0
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 2.1e-20 102.4 119 47.9
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 2.1e-20 102.4 119 47.9
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 3.6e-20 101.7 109 49.5
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 3.6e-20 101.7 118 49.2
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 2.3e-19 99.0 108 43.5
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 3.1e-19 98.6 99 52.5
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 4.0e-19 98.2 111 48.6
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 6.8e-19 97.4 115 47.8
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 1.5e-18 96.3 115 48.7
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 1.1e-16 90.1 76 61.8
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 1.4e-16 89.7 108 47.2
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 1.0e-14 83.6 67 65.7
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 2.1e-07 59.3 75 40.0
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 6.6e-06 54.3 56 48.2


User provided reference genes

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