Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019505 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D004316 5.8e-109 397.5 192 100.0
vmacro21202 Vaccinium macrocarpon HOM05D000010 ORTHO05D004316 7.7e-21 104.8 120 50.0
Rhsim06G0089300 Rhododendron simsii HOM05D000010 ORTHO05D004316 5.0e-20 102.1 120 50.0
PGSC0003DMG400031149 Solanum tuberosum HOM05D000010 ORTHO05D004316 3.0e-17 92.8 141 42.6
Sopen04g028400 Solanum pennellii HOM05D000010 ORTHO05D004316 4.4e-16 89.0 141 41.8
Dinv41013 Davidia involucrata HOM05D000010 ORTHO05D004316 7.5e-16 88.2 118 50.0
Solyc04g072220.3 Solanum lycopersicum HOM05D000010 ORTHO05D004316 7.5e-16 88.2 141 41.8
CAN.G1010.3 Capsicum annuum HOM05D000010 ORTHO05D004316 1.3e-15 87.4 139 41.0
Nitab4.5_0000433g0130 Nicotiana tabacum HOM05D000010 ORTHO05D004316 4.9e-15 85.5 141 41.8
Peaxi162Scf00226g00319 Petunia axillaris HOM05D000010 ORTHO05D004316 2.4e-14 83.2 111 48.6
Nitab4.5_0001000g0040 Nicotiana tabacum HOM05D000010 ORTHO05D004316 3.1e-14 82.8 114 45.6
Oeu027224.1 Olea europaea HOM05D000010 ORTHO05D004316 1.2e-13 80.9 125 44.0
Manes.02G186500 Manihot esculenta HOM05D000010 ORTHO05D004316 5.9e-13 78.6 120 45.8
SGA_v2.0_scaffold553G52893 Striga asiatica HOM05D000010 ORTHO05D004316 7.8e-13 78.2 103 45.6
Haze_17847 Corylus avellana HOM05D000010 ORTHO05D004316 1.3e-12 77.4 115 46.1
Potri.005G200100 Populus trichocarpa HOM05D000010 ORTHO05D004316 1.7e-12 77.0 118 46.6
Prupe.8G045800 Prunus persica HOM05D000010 ORTHO05D004316 2.3e-12 76.6 109 46.8
TWI32G0847 Tripterygium wilfordii HOM05D000010 ORTHO05D004316 2.3e-12 76.6 109 46.8
Cfa018251 Carpinus fangiana HOM05D000010 ORTHO05D004316 3.8e-12 75.9 113 46.0
CiPaw.16G006500 Carya illinoinensis HOM05D000010 ORTHO05D004316 6.6e-12 75.1 129 40.3
Migut.N02933 Erythranthe guttata HOM05D000010 ORTHO05D004316 6.6e-12 75.1 109 47.7
HanXRQChr10g0278711 Helianthus annuus HOM05D000010 ORTHO05D004316 6.6e-12 75.1 107 45.8
Ciclev10000612m.g Citrus clementina HOM05D000010 ORTHO05D004316 8.6e-12 74.7 129 41.9
Lj7A387G68 Lonicera japonica HOM05D000010 ORTHO05D004316 8.6e-12 74.7 119 42.9
MD10G1041500 Malus domestica HOM05D000010 ORTHO05D004316 8.6e-12 74.7 131 40.5
Sabra05G0152200 Salix brachista HOM05D000010 ORTHO05D004316 8.6e-12 74.7 118 44.9
CiPaw.15G010900 Carya illinoinensis HOM05D000010 ORTHO05D004316 1.5e-11 73.9 113 46.9
CANSAT25G0087 Cannabis sativa HOM05D000010 ORTHO05D004316 1.9e-11 73.6 129 41.1
Peaxi162Scf00160g01636 Petunia axillaris HOM05D000010 ORTHO05D004316 1.9e-11 73.6 96 45.8
MD05G1037700 Malus domestica HOM05D000010 ORTHO05D004316 2.5e-11 73.2 131 40.5
Nitab4.5_0004295g0050 Nicotiana tabacum HOM05D000010 ORTHO05D004316 2.5e-11 73.2 116 43.1
Migut.N02932 Erythranthe guttata HOM05D000010 ORTHO05D004316 3.3e-11 72.8 106 44.3
Sabra02G0049600 Salix brachista HOM05D004266 ORTHO05D005151 4.3e-11 72.4 118 45.8
HanXRQChr09g0243981 Helianthus annuus HOM05D000010 ORTHO05D004316 7.3e-11 71.6 107 44.9
Thecc.08G196700 Theobroma cacao HOM05D000010 ORTHO05D004316 7.3e-11 71.6 108 42.6
CANSAT25G3469 Cannabis sativa HOM05D000010 ORTHO05D004316 1.2e-10 70.9 101 45.5
Nitab4.5_0004541g0050 Nicotiana tabacum HOM05D000010 ORTHO05D004316 1.2e-10 70.9 109 43.1
unitig_578.g16215 Utricularia gibba HOM05D000010 ORTHO05D004316 1.2e-10 70.9 83 49.4
Actinidia10278 Actinidia chinensis HOM05D000010 ORTHO05D004316 1.6e-10 70.5 134 39.6
Cc10_g06320 Coffea canephora HOM05D000010 ORTHO05D004316 1.6e-10 70.5 102 43.1
SalBow6G0248 Salvia bowleyana HOM05D000010 ORTHO05D004316 1.6e-10 70.5 64 62.5
QL02p035310 Quercus lobata HOM05D000010 ORTHO05D004316 2.1e-10 70.1 127 40.2
QL02p036691 Quercus lobata HOM05D000010 ORTHO05D004316 2.1e-10 70.1 127 40.2
TAR381G0546 Trochodendron aralioides HOM05D000010 ORTHO05D004316 2.1e-10 70.1 121 43.0
Nn1g05179 Nelumbo nucifera HOM05D000010 ORTHO05D004316 2.8e-10 69.7 129 41.9
SGA_v2.0_scaffold288G47245 Striga asiatica HOM05D000010 ORTHO05D004316 2.8e-10 69.7 86 50.0
MELO3C019954.2 Cucumis melo HOM05D000010 ORTHO05D004316 3.6e-10 69.3 128 43.0
DCAR_019984 Daucus carota HOM05D000010 ORTHO05D004316 3.6e-10 69.3 100 46.0
RcHm_v2.0_Chr6g0273431 Rosa chinensis HOM05D000010 ORTHO05D004316 3.6e-10 69.3 105 44.8
Phvul.007G085600 Phaseolus vulgaris HOM05D000010 ORTHO05D004316 4.7e-10 68.9 150 36.7
Gohir.D05G248900 Gossypium hirsutum HOM05D000010 ORTHO05D004316 6.1e-10 68.6 117 40.2
Sed0015101 Sechium edule HOM05D000010 ORTHO05D004316 6.1e-10 68.6 104 45.2
PGSC0003DMG400016962 Solanum tuberosum HOM05D000010 ORTHO05D004316 6.1e-10 68.6 127 41.7
arahy.Tifrunner.gnm1.ann1.8D109F Arachis hypogaea HOM05D000010 ORTHO05D004316 8.0e-10 68.2 123 39.8
Gorai.009G260000 Gossypium raimondii HOM05D000010 ORTHO05D004316 8.0e-10 68.2 117 40.2
Lj5g0009860 Lotus japonicus HOM05D000010 ORTHO05D004316 8.0e-10 68.2 148 37.2
Oeu036726.1 Olea europaea HOM05D000010 ORTHO05D004316 8.0e-10 68.2 71 54.9
CsaV3_6G004800 Cucumis sativus L. HOM05D000010 ORTHO05D004316 1.0e-09 67.8 121 44.6
VMungo0720G0429 Vigna mungo HOM05D000010 ORTHO05D004316 1.0e-09 67.8 149 37.6
Duzib211G0642 Durio zibethinus HOM05D000010 ORTHO05D004316 1.4e-09 67.4 112 42.9
Gohir.A05G247400 Gossypium hirsutum HOM05D000010 ORTHO05D004316 1.4e-09 67.4 117 41.0
Lsat_1_v5_gn_6_99960 Lactuca sativa HOM05D000010 ORTHO05D004316 1.4e-09 67.4 109 41.3
Lalb_Chr06g0161851 Lupinus albus HOM05D000010 ORTHO05D004316 1.4e-09 67.4 80 50.0
Potri.002G061300 Populus trichocarpa HOM05D000010 ORTHO05D004316 1.4e-09 67.4 115 42.6
Sed0027261 Sechium edule HOM05D000010 ORTHO05D004316 1.4e-09 67.4 101 44.6
Sopen12g029470 Solanum pennellii HOM05D000010 ORTHO05D004316 1.8e-09 67.0 114 43.9
Atru.chr13.1955 Acer truncatum HOM05D000010 ORTHO05D004316 3.1e-09 66.2 126 40.5
Oeu061458.1 Olea europaea HOM05D000010 ORTHO05D004316 3.1e-09 66.2 86 48.8
Lalb_Chr21g0305651 Lupinus albus HOM05D000010 ORTHO05D004316 5.2e-09 65.5 152 34.9
Hund25941 Selenicereus undatus HOM05D000010 ORTHO05D004316 5.2e-09 65.5 74 52.7
ClCG09G010760 Citrullus lanatus HOM05D000010 ORTHO05D004316 6.8e-09 65.1 115 40.9
COL.COLO4_05235 Corchorus olitorius HOM05D000273 ORTHO05D004316 8.9e-09 64.7 123 38.2
Gohir.A02G061700 Gossypium hirsutum HOM05D000010 ORTHO05D004316 8.9e-09 64.7 107 41.1
Solyc12g056790.2 Solanum lycopersicum HOM05D000010 ORTHO05D004316 8.9e-09 64.7 118 42.4
TAR628G1521 Trochodendron aralioides HOM05D000010 ORTHO05D004316 8.9e-09 64.7 89 50.6
EL10Ac8g19197 Beta vulgaris HOM05D000010 ORTHO05D004316 1.2e-08 64.3 79 46.8
FAN15G2808 Fragaria x ananassa HOM05D000010 ORTHO05D004316 1.5e-08 63.9 106 44.3
Glyma.20G172100 Glycine max HOM05D000010 ORTHO05D004316 1.5e-08 63.9 110 40.9
PGR042G2358 Punica granatum HOM05D000010 ORTHO05D004316 1.5e-08 63.9 73 52.1
arahy.Tifrunner.gnm1.ann1.2AA9DZ Arachis hypogaea HOM05D000010 ORTHO05D004316 2.0e-08 63.5 113 40.7
ECA246G2771 Erigeron canadensis HOM05D000010 ORTHO05D004316 2.6e-08 63.2 70 50.0
FAN24G3419 Fragaria x ananassa HOM05D000010 ORTHO05D004316 2.6e-08 63.2 105 44.8
HanXRQChr05g0162521 Helianthus annuus HOM05D000010 ORTHO05D004316 2.6e-08 63.2 97 41.2
FAN27G0448 Fragaria x ananassa HOM05D000010 ORTHO05D004316 3.4e-08 62.8 106 44.3
Glyma.10G219600 Glycine max HOM05D000010 ORTHO05D004316 3.4e-08 62.8 110 40.0
Gohir.D02G067300 Gossypium hirsutum HOM05D000010 ORTHO05D004316 3.4e-08 62.8 107 40.2
Gorai.005G076200 Gossypium raimondii HOM05D000010 ORTHO05D004316 3.4e-08 62.8 107 40.2
Oeu046081.1 Olea europaea HOM05D000010 ORTHO05D004316 3.4e-08 62.8 78 51.3
Duzib116G0504 Durio zibethinus HOM05D000010 ORTHO05D004316 4.4e-08 62.4 74 48.6
Medtr1g097300 Medicago truncatula HOM05D000010 ORTHO05D004316 5.8e-08 62.0 139 36.7
Ca_10641_v3 Cicer arietinum L. HOM05D000010 ORTHO05D004316 7.5e-08 61.6 124 37.1
FAN20G2327 Fragaria x ananassa HOM05D000010 ORTHO05D004316 7.5e-08 61.6 106 43.4
Sed0009730 Sechium edule HOM05D000010 ORTHO05D004316 7.5e-08 61.6 111 37.8
GSVIVG01013671001 Vitis vinifera HOM05D000010 ORTHO05D004316 7.5e-08 61.6 81 48.1
ClCG08G008780 Citrullus lanatus HOM05D000010 ORTHO05D004316 9.8e-08 61.2 62 61.3
Duzib093G0838 Durio zibethinus HOM05D000010 ORTHO05D004316 9.8e-08 61.2 82 45.1
Dinv13095 Davidia involucrata HOM05D000010 ORTHO05D004316 2.2e-07 60.1 59 61.0
TPR.G23152 Trifolium pratense HOM05D000010 ORTHO05D004316 2.2e-07 60.1 134 35.1
AUR62033952 Chenopodium quinoa HOM05D000010 ORTHO05D004316 8.3e-07 58.2 116 34.5
Thhalv10007196m.g Eutrema salsugineum HOM05D000010 ORTHO05D004316 8.3e-07 58.2 111 37.8
BcaB03g13678 Brassica carinata HOM05D000010 ORTHO05D004316 1.1e-06 57.8 111 36.9
AUR62029057 Chenopodium quinoa HOM05D000010 ORTHO05D004316 1.1e-06 57.8 61 52.5
Psat6g189280 Pisum sativum HOM05D000010 ORTHO05D004316 1.1e-06 57.8 119 39.5
A05p23920 Brassica napus HOM05D000010 ORTHO05D004316 1.4e-06 57.4 98 37.8
BraA05t21271Z Brassica rapa HOM05D000010 ORTHO05D004316 1.4e-06 57.4 98 37.8
A09p32330 Brassica napus HOM05D000010 ORTHO05D004316 2.4e-06 56.6 93 39.8
Actinidia28547 Actinidia chinensis HOM05D000010 ORTHO05D009770 4.1e-06 55.8 76 48.7
Ah.14g085180 Amaranthus hybridus HOM05D000010 ORTHO05D004316 4.1e-06 55.8 71 43.7
BcaC08g43803 Brassica carinata HOM05D000010 ORTHO05D004316 4.1e-06 55.8 93 39.8
BolC6t36315H Brassica oleracea HOM05D000010 ORTHO05D004316 4.1e-06 55.8 93 39.8
Sp1g29420 Schrenkiella parvula HOM05D000010 ORTHO05D004316 4.1e-06 55.8 120 35.0
BolC5t32498H Brassica oleracea HOM05D000010 ORTHO05D004316 5.4e-06 55.5 112 35.7
Eucgr.F02771 Eucalyptus grandis HOM05D000010 ORTHO05D004316 7.0e-06 55.1 69 44.9
Manes.18G096600 Manihot esculenta HOM05D000010 ORTHO05D004316 7.0e-06 55.1 119 36.1
BcaB07g33154 Brassica carinata HOM05D000010 ORTHO05D004316 9.2e-06 54.7 96 36.5
Lj4A706T79 Lonicera japonica HOM05D000010 ORTHO05D004316 9.2e-06 54.7 67 43.3


User provided reference genes

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