Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019486 Camellia sinensis var. sinensis HOM05D006404 ORTHO05D008170 2.1e-304 1048.1 495 100.0
CSS0037938 Camellia sinensis var. sinensis HOM05D006404 ORTHO05D008170 5.5e-297 1023.5 484 99.4
Rhsim13G0217700 Rhododendron simsii HOM05D006404 ORTHO05D008170 1.5e-238 829.3 484 79.5
Actinidia06923 Actinidia chinensis HOM05D006404 ORTHO05D008170 9.3e-236 820.1 499 77.0
vmacro04128 Vaccinium macrocarpon HOM05D006404 ORTHO05D008170 9.6e-233 810.1 483 78.5
Actinidia16347 Actinidia chinensis HOM05D006404 ORTHO05D008170 1.1e-231 806.6 484 76.9
GSVIVG01031534001 Vitis vinifera HOM05D006404 ORTHO05D008170 9.3e-220 766.9 490 72.9
COL.COLO4_36457 Corchorus olitorius HOM05D006404 ORTHO05D008170 6.1e-219 764.2 484 71.9
QL01p004100 Quercus lobata HOM05D006404 ORTHO05D008170 1.8e-218 762.7 489 72.4
TAR633G0603 Trochodendron aralioides HOM05D006404 ORTHO05D008170 9.7e-217 756.9 491 71.7
Potri.009G051100 Populus trichocarpa HOM05D006404 ORTHO05D008170 3.8e-213 745.0 489 69.3
MD03G1172000 Malus domestica HOM05D006404 ORTHO05D008170 5.0e-213 744.6 485 70.3
Cfa009810 Carpinus fangiana HOM05D006404 ORTHO05D008170 1.1e-212 743.4 485 70.5
Potri.001G255700 Populus trichocarpa HOM05D006404 ORTHO05D008170 1.9e-212 742.7 489 68.1
Atru.chr3.2649 Acer truncatum HOM05D006404 ORTHO05D008170 1.2e-211 740.0 491 70.7
Duzib150G0746 Durio zibethinus HOM05D006404 ORTHO05D008170 4.6e-211 738.0 488 70.3
Thecc.09G239000 Theobroma cacao HOM05D006404 ORTHO05D008170 6.1e-211 737.6 487 69.8
Duzib168G1842 Durio zibethinus HOM05D006404 ORTHO05D008170 7.9e-211 737.3 491 69.5
CANSAT54G0859 Cannabis sativa HOM05D006404 ORTHO05D008170 3.9e-210 734.9 475 70.1
Cc01_g05020 Coffea canephora HOM05D006404 ORTHO05D008170 1.1e-209 733.4 489 69.1
FvH4_3g28450 Fragaria vesca HOM05D006404 ORTHO05D008170 1.5e-209 733.0 489 68.7
FAN21G1559 Fragaria x ananassa HOM05D006404 ORTHO05D008170 1.5e-209 733.0 489 68.7
FAN16G0405 Fragaria x ananassa HOM05D006404 ORTHO05D008170 2.6e-209 732.3 489 68.5
Sabra09G0037200 Salix brachista HOM05D006404 ORTHO05D008170 4.4e-209 731.5 489 68.5
FAN11G2181 Fragaria x ananassa HOM05D006404 ORTHO05D008170 5.7e-209 731.1 489 68.3
RcHm_v2.0_Chr5g0053011 Rosa chinensis HOM05D006404 ORTHO05D008170 1.3e-208 729.9 489 68.9
Prupe.4G254900 Prunus persica HOM05D006404 ORTHO05D008170 2.8e-208 728.8 488 68.4
Sabra16G0156500 Salix brachista HOM05D006404 ORTHO05D008170 4.1e-207 724.9 485 67.2
Oeu061307.1 Olea europaea HOM05D006404 ORTHO05D008170 6.9e-207 724.2 483 69.4
Manes.06G162300 Manihot esculenta HOM05D006404 ORTHO05D008170 1.5e-206 723.0 488 67.4
Ciclev10014162m.g Citrus clementina HOM05D006404 ORTHO05D008170 7.7e-206 720.7 490 68.6
Nn2g15163 Nelumbo nucifera HOM05D006404 ORTHO05D008170 2.2e-205 719.2 492 66.9
TWI32G0006 Tripterygium wilfordii HOM05D006404 ORTHO05D008170 4.2e-204 714.9 486 67.7
Lj2A624G32 Lonicera japonica HOM05D006404 ORTHO05D008170 7.2e-204 714.1 492 67.7
Nn7g36358 Nelumbo nucifera HOM05D006404 ORTHO05D008170 9.4e-204 713.8 489 66.7
Haze_23174 Corylus avellana HOM05D006404 ORTHO05D008170 3.6e-203 711.8 481 68.4
Gorai.009G074000 Gossypium raimondii HOM05D006404 ORTHO05D008170 1.5e-201 706.4 487 67.4
Gohir.A05G070000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 7.4e-201 704.1 487 67.1
Nitab4.5_0007711g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 5.3e-199 698.0 489 66.5
Peaxi162Scf00004g03311 Petunia axillaris HOM05D006404 ORTHO05D008170 2.0e-198 696.0 488 66.2
MSTRG.12459 Avicennia marina HOM05D006404 ORTHO05D008170 2.9e-197 692.2 483 65.2
Nitab4.5_0006123g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 6.5e-197 691.0 489 66.3
Gorai.006G126600 Gossypium raimondii HOM05D006404 ORTHO05D008170 2.7e-195 685.6 484 66.7
Gohir.A09G112300 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.0e-194 683.7 484 66.5
Solyc11g065340.2 Solanum lycopersicum HOM05D006404 ORTHO05D008170 1.0e-194 683.7 487 65.5
Gohir.D09G109000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.4e-194 683.3 484 66.7
Sopen11g025080 Solanum pennellii HOM05D006404 ORTHO05D008170 5.2e-194 681.4 489 65.2
Eucgr.B03709 Eucalyptus grandis HOM05D006404 ORTHO05D008170 7.7e-190 667.5 476 63.7
PGSC0003DMG400029994 Solanum tuberosum HOM05D006404 ORTHO05D008170 2.2e-189 666.0 472 66.1
CAN.G494.3 Capsicum annuum HOM05D006404 ORTHO05D008170 8.5e-189 664.1 490 64.1
MELO3C015171.2 Cucumis melo HOM05D006404 ORTHO05D008170 2.5e-188 662.5 484 63.8
EL10Ac4g10212 Beta vulgaris HOM05D006404 ORTHO05D008170 9.4e-188 660.6 486 62.3
CsaV3_1G042990 Cucumis sativus L. HOM05D006404 ORTHO05D008170 1.0e-186 657.1 483 62.9
MBI19_g45588_MAGBIO Magnolia biondii HOM05D006404 ORTHO05D008170 1.8e-186 656.4 488 62.9
ClCG03G013070 Citrullus lanatus HOM05D006404 ORTHO05D008170 8.8e-186 654.1 483 63.4
PGR102G1713 Punica granatum HOM05D006404 ORTHO05D008170 9.8e-185 650.6 488 62.7
Hund07470 Selenicereus undatus HOM05D006404 ORTHO05D008170 2.8e-184 649.0 490 62.2
Aqoxy2G00213 Aquilegia oxysepala HOM05D006404 ORTHO05D008170 2.0e-182 642.9 496 60.3
Glyma.11G094500 Glycine max HOM05D006404 ORTHO05D008170 1.0e-181 640.6 491 61.1
Glyma.12G020900 Glycine max HOM05D006404 ORTHO05D008170 1.7e-181 639.8 485 61.9
DCAR_029968 Daucus carota HOM05D006404 ORTHO05D008170 2.3e-181 639.4 461 65.1
Glyma.01G227500 Glycine max HOM05D006404 ORTHO05D008170 1.0e-178 630.6 486 61.1
THA.LOC104811179 Tarenaya hassleriana HOM05D006404 ORTHO05D008170 2.3e-178 629.4 483 59.6
VMungo1127G0106 Vigna mungo HOM05D006404 ORTHO05D008170 8.8e-178 627.5 485 60.4
Ah.06g193910 Amaranthus hybridus HOM05D006404 ORTHO05D008170 7.5e-177 624.4 491 57.8
VMungo1215G1207 Vigna mungo HOM05D006404 ORTHO05D008170 1.3e-176 623.6 480 61.9
Migut.N02343 Erythranthe guttata HOM05D006404 ORTHO05D008170 4.9e-176 621.7 486 60.9
Zm00001eb332810 Zea mays HOM05D006404 ORTHO05D008170 1.8e-175 619.8 490 59.0
Lj3g0019929 Lotus japonicus HOM05D006404 ORTHO05D008170 2.7e-174 615.9 489 60.9
TPR.G13759 Trifolium pratense HOM05D006404 ORTHO05D008170 7.8e-174 614.4 458 62.0
Sc16g0011280 Simmondsia chinensis HOM05D006404 ORTHO05D008170 1.5e-172 610.1 488 58.4
Os01g0275900 Oryza sativa ssp. japonica HOM05D006404 ORTHO05D008170 1.9e-172 609.8 488 59.0
Ca_26059_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 9.5e-172 607.4 453 61.6
Ca_30127_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 9.5e-172 607.4 453 61.6
AUR62000151 Chenopodium quinoa HOM05D006404 ORTHO05D008170 4.7e-171 605.1 490 58.4
Medtr4g076810 Medicago truncatula HOM05D006404 ORTHO05D008170 4.7e-171 605.1 493 59.8
Psat7g172680 Pisum sativum HOM05D006404 ORTHO05D008170 4.7e-171 605.1 487 58.9
ECA233G0536 Erigeron canadensis HOM05D006404 ORTHO05D008170 1.0e-170 604.0 469 62.0
AUR62039864 Chenopodium quinoa HOM05D006404 ORTHO05D008170 1.5e-169 600.1 490 59.2
Sed0002434 Sechium edule HOM05D006404 ORTHO05D008170 3.4e-169 599.0 484 59.5
arahy.Tifrunner.gnm1.ann1.E0EAPG Arachis hypogaea HOM05D006404 ORTHO05D008170 2.3e-165 586.3 421 63.9
arahy.Tifrunner.gnm1.ann1.BK260Y Arachis hypogaea HOM05D006404 ORTHO05D008170 6.6e-165 584.7 421 63.7
Lalb_Chr03g0024521 Lupinus albus HOM05D006404 ORTHO05D008170 7.3e-164 581.3 410 64.9
HanXRQChr13g0401241 Helianthus annuus HOM05D006404 ORTHO05D008170 3.1e-162 575.9 475 55.6
unitig_27.g25000 Utricularia gibba HOM05D006404 ORTHO05D008170 8.6e-157 557.8 492 55.9
SGA_v2.0_scaffold3G01478 Striga asiatica HOM05D006404 ORTHO05D008170 1.9e-156 556.6 465 57.2
Gohir.D05G073000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 2.3e-154 549.7 387 66.7
CiPaw.13G154900 Carya illinoinensis HOM05D006404 ORTHO05D008170 4.9e-152 542.0 344 72.4
Phvul.002G034601 Phaseolus vulgaris HOM05D006404 ORTHO05D008170 8.3e-152 541.2 479 54.7
Lsat_1_v5_gn_6_25840 Lactuca sativa HOM05D006404 ORTHO05D008170 3.3e-148 529.3 441 56.9
SEGI_17812 Sequoiadendron giganteum HOM05D006404 ORTHO05D008170 2.4e-146 523.1 471 52.4
ATR0307G124 Amborella trichopoda HOM05D006404 ORTHO05D008170 7.6e-145 518.1 500 52.8
Cpa.g.sc84.27 Carica papaya HOM05D006404 ORTHO05D008170 8.1e-123 444.9 489 47.6
Manes.14G004336 Manihot esculenta HOM05D006404 ORTHO05D008170 1.1e-108 397.9 489 46.2
Mapoly0128s0014 Marchantia polymorpha HOM05D006404 ORTHO05D008170 2.5e-108 396.7 524 40.6
Glyma.11G015367 Glycine max HOM05D006404 ORTHO05D008170 1.4e-95 354.4 288 58.0
HPP92_028182 Vanilla planifolia HOM05D006404 ORTHO05D008170 3.6e-86 323.2 244 59.4
PGSC0003DMG400035426 Solanum tuberosum HOM05D006404 ORTHO05D008170 1.4e-74 284.6 203 66.5
CBR_g12234 Chara braunii HOM05D006404 ORTHO05D008170 6.8e-69 265.8 474 31.6
Phvul.011G076700 Phaseolus vulgaris HOM05D006404 ORTHO05D008170 7.8e-49 199.1 166 57.2
HPP92_028181 Vanilla planifolia HOM05D006404 ORTHO05D008170 3.3e-39 167.2 148 53.4
PGSC0003DMG400025695 Solanum tuberosum HOM05D006404 ORTHO05D008170 4.9e-35 153.3 106 67.0
PRCOL_00003209 Prasinoderma coloniale HOM05D006404 ORTHO05D008170 1.6e-22 111.7 418 26.1
Gohir.D05G072932 Gossypium hirsutum HOM05D006404 ORTHO05D008170 2.6e-20 104.4 66 66.7
HPP92_012439 Vanilla planifolia HOM05D006404 ORTHO05D008170 2.6e-12 77.8 59 52.5
COL.COLO4_24475 Corchorus olitorius HOM05D003120 ORTHO05D003568 6.4e-11 73.2 42 71.4
FAN25G0856 Fragaria x ananassa HOM05D006404 ORTHO05D008170 9.6e-07 59.3 163 28.2


User provided reference genes

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