Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 1.5e-190 669.5 357 100.0
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 1.1e-126 457.2 331 69.8
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 1.4e-121 440.3 332 66.9
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 2.7e-120 436.0 324 66.0
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 9.4e-113 411.0 334 62.9
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 8.8e-111 404.4 336 59.5
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 1.1e-110 404.1 329 59.3
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 4.4e-110 402.1 331 62.2
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 1.1e-108 397.5 335 59.1
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 1.2e-107 394.0 337 59.3
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 2.0e-107 393.3 336 58.9
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 2.0e-107 393.3 331 58.3
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 7.7e-107 391.3 338 58.9
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 7.7e-107 391.3 337 57.0
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 2.2e-106 389.8 338 58.0
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 6.5e-106 388.3 335 58.8
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 8.5e-106 387.9 337 56.7
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 3.2e-105 386.0 336 57.7
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 7.2e-105 384.8 335 58.5
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 7.2e-105 384.8 337 58.2
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 2.1e-104 383.3 340 58.2
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 1.8e-103 380.2 332 56.6
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 8.8e-103 377.9 318 60.1
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 1.2e-102 377.5 332 58.7
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 4.4e-102 375.6 331 60.1
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 1.7e-101 373.6 323 58.8
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 3.7e-101 372.5 338 57.4
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 4.8e-101 372.1 335 57.3
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 8.2e-101 371.3 333 55.3
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 8.2e-101 371.3 332 54.5
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 4.1e-100 369.0 338 57.1
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 1.6e-99 367.1 340 55.6
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 7.7e-99 364.8 333 56.5
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 1.7e-98 363.6 338 56.8
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.7e-98 363.6 338 56.8
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.7e-98 363.6 338 56.8
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.7e-98 363.6 338 56.8
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 2.1e-96 356.7 338 55.3
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 4.7e-96 355.5 334 54.5
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 8.0e-96 354.8 334 54.2
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 4.4e-94 349.0 336 55.7
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 7.7e-91 338.2 334 55.4
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 1.5e-89 334.0 341 50.4
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 1.6e-88 330.5 334 50.6
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 2.8e-88 329.7 311 55.9
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 2.8e-88 329.7 341 49.9
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 4.7e-88 328.9 343 51.0
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 6.1e-88 328.6 317 54.3
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 6.1e-88 328.6 341 50.4
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 6.1e-88 328.6 345 52.5
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 8.0e-88 328.2 334 50.3
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 2.3e-87 326.6 340 50.9
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 3.0e-87 326.2 320 53.1
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 1.5e-86 323.9 331 49.5
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 2.6e-86 323.2 335 50.1
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 2.6e-86 323.2 332 50.0
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 7.5e-86 321.6 336 49.4
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 9.8e-86 321.2 335 49.6
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 2.2e-85 320.1 329 51.1
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 2.8e-85 319.7 336 51.8
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 1.1e-84 317.8 341 49.6
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 3.1e-84 316.2 341 50.1
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 8.6e-82 308.1 316 50.3
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 3.3e-81 306.2 348 46.8
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 4.3e-81 305.8 333 48.9
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 6.1e-80 302.0 338 47.3
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 1.4e-79 300.8 336 48.2
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 1.2e-78 297.7 302 54.3
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 2.6e-78 296.6 335 46.9
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 9.8e-78 294.7 300 51.7
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 4.9e-77 292.4 335 46.0
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 6.4e-77 292.0 314 47.1
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 1.2e-75 287.7 333 46.5
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 2.0e-75 287.0 340 45.9
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 3.0e-74 283.1 342 47.4
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 3.6e-72 276.2 335 45.4
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 3.1e-71 273.1 368 44.3
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 8.9e-71 271.6 282 49.3
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 8.9e-71 271.6 311 47.6
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 5.8e-70 268.9 313 48.2
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 2.2e-69 266.9 335 46.0
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 2.2e-69 266.9 335 46.0
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 2.2e-69 266.9 335 46.0
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 2.9e-69 266.5 238 59.2
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 1.2e-67 261.2 331 43.2
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 1.6e-67 260.8 324 45.4
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 4.6e-67 259.2 275 52.7
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 6.0e-67 258.8 313 49.8
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 7.8e-67 258.5 324 45.1
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 3.0e-66 256.5 335 44.5
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 1.9e-65 253.8 335 42.1
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 1.9e-65 253.8 319 45.8
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 1.4e-63 247.7 206 57.3
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 1.8e-63 247.3 338 42.9
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 8.9e-63 245.0 317 42.6
PGR142G0953 Punica granatum HOM05D005574 ORTHO05D007102 1.5e-62 244.2 339 44.2
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 4.9e-61 239.2 326 42.0
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 9.2e-60 235.0 253 49.8
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 5.1e-58 229.2 305 45.2
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 1.7e-50 204.1 372 36.6
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 6.2e-48 195.7 241 48.5
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 6.9e-47 192.2 317 37.9
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 3.4e-46 189.9 321 34.9
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 1.9e-44 184.1 139 66.2
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 1.6e-43 181.0 341 35.8
unitig_32.g11728 Utricularia gibba HOM05D005574 ORTHO05D007102 2.1e-43 180.6 338 35.5
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 9.0e-39 165.2 130 56.9
Os03g0747100 Oryza sativa ssp. japonica HOM05D005574 ORTHO05D007102 3.4e-38 163.3 327 34.3
Zm00001eb057090 Zea mays HOM05D005574 ORTHO05D007102 2.2e-37 160.6 317 33.1
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 4.2e-36 156.4 185 44.9
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 7.1e-36 155.6 193 43.5
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 1.8e-34 151.0 174 45.4
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 3.3e-33 146.7 293 32.8
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 1.6e-32 144.4 155 46.5
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 3.5e-27 126.7 270 31.9
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 2.3e-26 124.0 102 56.9
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 1.4e-23 114.8 94 57.4
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 1.4e-20 104.8 143 42.0
BcaC07g42131 Brassica carinata HOM05D005574 ORTHO05D007102 1.8e-18 97.8 112 44.6
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 1.8e-18 97.8 109 45.9
C08p51720 Brassica napus HOM05D005574 ORTHO05D007102 1.8e-18 97.8 112 44.6
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 1.8e-18 97.8 109 45.9
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 2.3e-18 97.4 108 46.3
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 2.3e-18 97.4 108 46.3
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 3.0e-18 97.1 109 45.9
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 1.5e-17 94.7 108 45.4
A09p67440 Brassica napus HOM05D005574 ORTHO05D007102 4.3e-17 93.2 99 47.5
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 4.3e-17 93.2 110 47.3
BcaB07g33702 Brassica carinata HOM05D005574 ORTHO05D007102 1.1e-15 88.6 197 32.5
Sabra08G0117800 Salix brachista HOM05D000633 ORTHO05D000477 1.4e-15 88.2 79 53.2
C01p45800 Brassica napus HOM05D005574 ORTHO05D007102 9.0e-15 85.5 156 33.3
A09p57160 Brassica napus HOM05D005574 ORTHO05D007102 1.5e-14 84.7 65 63.1
BcaC09g48798 Brassica carinata HOM05D005574 ORTHO05D007102 5.9e-14 82.8 98 42.9
Haze_20405 Corylus avellana HOM05D005574 ORTHO05D007102 1.7e-08 64.7 66 45.5
BcaC07g42130 Brassica carinata HOM05D005574 ORTHO05D007102 4.1e-07 60.1 111 35.1


User provided reference genes

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