Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019463 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.8e-87 325.9 164 100.0
CSS0004677 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.7e-72 276.2 167 88.0
Hma1.2p1_0205F.1_g087265 Hydrangea macrophylla HOM05D006384 ORTHO05D007917 4.0e-50 201.8 163 68.1
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 3.4e-49 198.7 161 67.7
Rhsim03G0093600 Rhododendron simsii HOM05D006384 ORTHO05D007917 4.4e-49 198.4 156 67.9
QL07p044018 Quercus lobata HOM05D006384 ORTHO05D007917 7.5e-49 197.6 165 65.5
Haze_20571 Corylus avellana HOM05D006384 ORTHO05D007917 9.8e-49 197.2 165 66.7
Cc06_g04070 Coffea canephora HOM05D006384 ORTHO05D007917 1.3e-48 196.8 162 64.2
Nitab4.5_0000754g0290 Nicotiana tabacum HOM05D006384 ORTHO05D007917 1.3e-48 196.8 153 66.7
Nitab4.5_0002130g0050 Nicotiana tabacum HOM05D006384 ORTHO05D007917 1.3e-48 196.8 153 66.0
Nn2g11540 Nelumbo nucifera HOM05D006384 ORTHO05D007917 2.2e-48 196.1 155 65.8
Sopen10g035590 Solanum pennellii HOM05D006384 ORTHO05D007917 2.8e-48 195.7 157 65.6
Solyc10g086210.2 Solanum lycopersicum HOM05D006384 ORTHO05D007917 6.3e-48 194.5 157 65.0
Dinv37301 Davidia involucrata HOM05D006384 ORTHO05D007917 1.8e-47 193.0 155 67.7
Peaxi162Scf00488g00042 Petunia axillaris HOM05D006384 ORTHO05D007917 4.1e-47 191.8 150 67.3
TAR623G0498 Trochodendron aralioides HOM05D001475 ORTHO05D001525 7.0e-47 191.0 157 65.0
PGR004G0408 Punica granatum HOM05D006384 ORTHO05D007917 9.2e-47 190.7 154 66.2
FvH4_6g16140 Fragaria vesca HOM05D006384 ORTHO05D007917 1.2e-46 190.3 151 68.2
Cpa.g.c35130 Carica papaya HOM05D006384 ORTHO05D007917 1.6e-46 189.9 155 67.1
Thecc.05G063500 Theobroma cacao HOM05D006384 ORTHO05D007917 2.7e-46 189.1 158 63.9
CAN.G509.15 Capsicum annuum HOM05D006384 ORTHO05D007917 3.5e-46 188.7 160 62.5
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 3.5e-46 188.7 163 64.4
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 3.5e-46 188.7 163 64.4
ECA248G2568 Erigeron canadensis HOM05D006384 ORTHO05D007917 4.5e-46 188.3 153 64.7
Lj2A115T51 Lonicera japonica HOM05D006384 ORTHO05D007917 1.3e-45 186.8 161 60.2
Potri.006G126200 Populus trichocarpa HOM05D006384 ORTHO05D007917 1.3e-45 186.8 155 64.5
Duzib093G1098 Durio zibethinus HOM05D006384 ORTHO05D007917 1.7e-45 186.4 158 63.3
Atru.chr8.1840 Acer truncatum HOM05D006384 ORTHO05D007917 3.8e-45 185.3 152 63.8
Gohir.D04G111800 Gossypium hirsutum HOM05D006384 ORTHO05D007917 3.8e-45 185.3 158 62.7
Gorai.009G415700 Gossypium raimondii HOM05D006384 ORTHO05D007917 3.8e-45 185.3 158 62.7
MD12G1115500 Malus domestica HOM05D006384 ORTHO05D007917 3.8e-45 185.3 164 62.2
TAR369G0955 Trochodendron aralioides HOM05D006384 ORTHO05D007917 3.8e-45 185.3 151 63.6
Manes.09G064200 Manihot esculenta HOM05D006384 ORTHO05D007917 8.6e-45 184.1 158 62.0
arahy.Tifrunner.gnm1.ann1.TG2889 Arachis hypogaea HOM05D006384 ORTHO05D007917 1.1e-44 183.7 158 64.6
FAN09G1862 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.1e-44 183.7 165 61.8
SalBow5G1519 Salvia bowleyana HOM05D006384 ORTHO05D007917 1.5e-44 183.3 158 62.0
SalBow5G1643 Salvia bowleyana HOM05D006384 ORTHO05D007917 1.5e-44 183.3 158 62.0
THA.LOC104806487 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 1.5e-44 183.3 163 63.2
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 1.9e-44 183.0 164 59.1
arahy.Tifrunner.gnm1.ann1.FRB5VT Arachis hypogaea HOM05D006384 ORTHO05D007917 2.5e-44 182.6 158 64.6
Gohir.A04G072900 Gossypium hirsutum HOM05D006384 ORTHO05D007917 2.5e-44 182.6 158 62.0
TWI74G0201 Tripterygium wilfordii HOM05D006384 ORTHO05D007917 2.5e-44 182.6 166 60.8
FAN02G0742 Fragaria x ananassa HOM05D006384 ORTHO05D007917 3.3e-44 182.2 165 61.8
GSVIVG01025711001 Vitis vinifera HOM05D006384 ORTHO05D007917 3.3e-44 182.2 153 61.4
RcHm_v2.0_Chr3g0469981 Rosa chinensis HOM05D006384 ORTHO05D007917 4.3e-44 181.8 150 64.0
ATR0680G046 Amborella trichopoda HOM05D006384 ORTHO05D007917 5.6e-44 181.4 156 61.5
Aa31LG5G22260 Aethionema arabicum HOM05D006384 ORTHO05D007917 9.5e-44 180.6 152 65.1
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 9.5e-44 180.6 156 59.6
Prupe.6G234600 Prunus persica HOM05D006384 ORTHO05D007917 9.5e-44 180.6 150 64.7
Glyma.19G182800 Glycine max HOM05D006384 ORTHO05D007917 1.6e-43 179.9 154 61.0
Thhalv10016975m.g Eutrema salsugineum HOM05D006384 ORTHO05D007917 3.6e-43 178.7 165 59.4
Migut.L01690 Erythranthe guttata HOM05D006384 ORTHO05D007917 6.1e-43 177.9 158 61.4
MSTRG.10316 Avicennia marina HOM05D006384 ORTHO05D007917 8.0e-43 177.6 158 60.8
SGA_v2.0_scaffold452G51820 Striga asiatica HOM05D006384 ORTHO05D007917 8.0e-43 177.6 158 61.4
Carub.0004s1888 Capsella rubella HOM05D006384 ORTHO05D007917 1.0e-42 177.2 153 62.7
THA.LOC104823480 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 1.8e-42 176.4 165 58.8
AT2G37020 Arabidopsis thaliana HOM05D006384 ORTHO05D007917 2.3e-42 176.0 153 62.7
Ca_08852_v3 Cicer arietinum L. HOM05D006384 ORTHO05D007917 3.0e-42 175.6 155 60.0
BcaB01g03801 Brassica carinata HOM05D006384 ORTHO05D007917 4.0e-42 175.3 165 58.8
AUR62040461 Chenopodium quinoa HOM05D006384 ORTHO05D007917 4.0e-42 175.3 151 59.6
ClCG10G020230 Citrullus lanatus HOM05D006384 ORTHO05D007917 4.0e-42 175.3 165 58.8
Sp4g19300 Schrenkiella parvula HOM05D006384 ORTHO05D007917 4.0e-42 175.3 153 61.4
Lj1g0002515 Lotus japonicus HOM05D006384 ORTHO05D007917 5.2e-42 174.9 162 60.5
AL4G33330 Arabidopsis lyrata HOM05D006384 ORTHO05D007917 1.2e-41 173.7 153 61.4
A03p20380 Brassica napus HOM05D006384 ORTHO05D007917 1.5e-41 173.3 166 58.4
C03p23970 Brassica napus HOM05D006384 ORTHO05D007917 1.5e-41 173.3 166 58.4
BraA03t11282Z Brassica rapa HOM05D006384 ORTHO05D007917 1.5e-41 173.3 166 58.4
CARHR131500 Cardamine hirsuta HOM05D006384 ORTHO05D007917 1.5e-41 173.3 153 61.4
MELO3C009346.2 Cucumis melo HOM05D006384 ORTHO05D007917 1.5e-41 173.3 164 58.5
CsaV3_3G035870 Cucumis sativus L. HOM05D006384 ORTHO05D007917 2.6e-41 172.6 156 59.0
unitig_0.g684 Utricularia gibba HOM05D006384 ORTHO05D007917 2.6e-41 172.6 158 58.2
BcaC01g05625 Brassica carinata HOM05D006384 ORTHO05D007917 4.4e-41 171.8 165 58.2
BolC3t14788H Brassica oleracea HOM05D006384 ORTHO05D007917 5.8e-41 171.4 166 57.8
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 5.8e-41 171.4 155 60.6
Eucgr.A01141 Eucalyptus grandis HOM05D006384 ORTHO05D007917 7.5e-41 171.0 155 60.0
PSO801G0099 Papaver somniferum HOM05D006384 ORTHO05D007917 7.5e-41 171.0 153 59.5
Oeu016975.2 Olea europaea HOM05D006384 ORTHO05D007917 2.2e-40 169.5 168 56.0
Ah.15g092420 Amaranthus hybridus HOM05D006384 ORTHO05D007917 4.9e-40 168.3 165 53.3
CSS0039092 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 6.4e-40 167.9 123 71.5
PSO339G6114 Papaver somniferum HOM05D006384 ORTHO05D007917 6.4e-40 167.9 153 58.8
Medtr7g101760 Medicago truncatula HOM05D006384 ORTHO05D007917 8.3e-40 167.5 152 57.2
TPR.G9375 Trifolium pratense HOM05D006384 ORTHO05D007917 1.1e-39 167.2 154 57.8
Lsat_1_v5_gn_1_52961 Lactuca sativa HOM05D006384 ORTHO05D007917 1.8e-39 166.4 153 59.5
Os10g0443200 Oryza sativa ssp. japonica HOM05D006384 ORTHO05D007917 3.2e-39 165.6 154 54.5
Phvul.001G178300 Phaseolus vulgaris HOM05D006384 ORTHO05D007917 4.1e-39 165.2 154 58.4
CDE06G0314 Ceratophyllum demersum HOM05D006384 ORTHO05D007917 5.4e-39 164.9 150 56.7
Sc20g0005270 Simmondsia chinensis HOM05D006384 ORTHO05D007917 5.4e-39 164.9 150 59.3
VMungo1383G1856 Vigna mungo HOM05D006384 ORTHO05D007917 7.0e-39 164.5 154 59.1
DCAR_009302 Daucus carota HOM05D006384 ORTHO05D007917 1.2e-38 163.7 150 57.3
Psat3g043320 Pisum sativum HOM05D006384 ORTHO05D007917 4.6e-38 161.8 152 57.2
HPP92_025998 Vanilla planifolia HOM05D006384 ORTHO05D007917 1.0e-37 160.6 161 54.0
VMungo1383G2663 Vigna mungo HOM05D006384 ORTHO05D007917 3.0e-37 159.1 154 57.8
Aqoxy2G01819 Aquilegia oxysepala HOM05D006384 ORTHO05D007917 2.5e-36 156.0 159 54.7
Sed0012269 Sechium edule HOM05D006384 ORTHO05D007917 2.5e-36 156.0 153 55.6
Ciclev10013845m.g Citrus clementina HOM05D006384 ORTHO05D007917 4.3e-36 155.2 136 60.3
Hund20279 Selenicereus undatus HOM05D006384 ORTHO05D007917 5.6e-36 154.8 181 50.3
Actinidia40017 Actinidia chinensis HOM05D006384 ORTHO05D007917 2.1e-35 152.9 163 58.3
CANSAT80G0575 Cannabis sativa HOM05D006384 ORTHO05D007917 1.2e-33 147.1 139 59.7
AUR62041978 Chenopodium quinoa HOM05D006384 ORTHO05D007917 1.2e-33 147.1 147 56.5
EL10Ac7g16562 Beta vulgaris HOM05D006384 ORTHO05D007917 1.3e-32 143.7 158 49.4
SEGI_26624 Sequoiadendron giganteum HOM05D006384 ORTHO05D007917 7.0e-31 137.9 156 46.2
Mapoly0009s0045 Marchantia polymorpha HOM05D006384 ORTHO05D007917 9.9e-25 117.5 151 41.1
AagrBONN_evm.TU.Sc2ySwM_117.2066 Anthoceros agrestis HOM05D006384 ORTHO05D007917 3.9e-21 105.5 152 36.8
SMO197G0035 Selaginella moellendorffii HOM05D006384 ORTHO05D007917 8.6e-21 104.4 147 37.4
Sc20g0001670 Simmondsia chinensis HOM05D006384 ORTHO05D007917 2.8e-19 99.4 134 41.0
CBR_g30715 Chara braunii HOM05D001230 ORTHO05D007917 6.2e-19 98.2 150 36.0
CBR_g45408 Chara braunii HOM05D006384 ORTHO05D007917 1.2e-17 94.0 167 34.1
Glyma.03G182200 Glycine max HOM05D006384 ORTHO05D007917 1.4e-15 87.0 92 55.4
Zm00001eb222550 Zea mays HOM05D006384 ORTHO05D007917 5.1e-13 78.6 96 47.9
Cpa.g.sc2150.3 Carica papaya HOM05D006384 ORTHO05D007917 4.0e-10 68.9 55 70.9
vmacro07280 Vaccinium macrocarpon HOM05D006384 ORTHO05D007917 6.9e-10 68.2 37 78.4
DCAR_017395 Daucus carota HOM05D006384 ORTHO05D007917 2.2e-08 63.2 42 61.9
TAR374G1213 Trochodendron aralioides HOM05D000928 ORTHO05D000023 6.0e-06 55.1 39 56.4
MELO3C032679.2 Cucumis melo HOM05D006384 ORTHO05D007917 7.8e-06 54.7 57 56.1


User provided reference genes

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