Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019405 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 3.4e-65 251.5 129 100.0
CSS0037282 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 5.1e-61 237.7 129 96.1
CSS0045093 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 7.4e-60 233.8 129 95.3
CSS0003368 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.8e-59 231.9 125 96.8
CSS0006742 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.8e-59 231.9 125 96.8
CSS0009901 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.4e-58 229.6 125 96.0
CSS0036251 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.4e-55 219.5 125 92.8
CSS0007712 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 3.6e-54 214.9 158 76.6
CSS0000180 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 3.0e-53 211.8 158 75.9
CSS0042483 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 3.3e-44 181.8 142 73.2
CSS0028785 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 8.0e-14 80.9 61 68.9
CSS0034948 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.4e-13 80.1 61 68.9
Rhsim03G0202300 Rhododendron simsii HOM05D017301 ORTHO05D000669 5.4e-10 68.2 79 51.9
Rhsim02G0136300 Rhododendron simsii HOM05D017301 ORTHO05D000669 2.7e-09 65.9 79 49.4
vmacro01281 Vaccinium macrocarpon HOM05D017301 ORTHO05D000669 4.6e-09 65.1 100 40.0
Rhsim11G0020900 Rhododendron simsii HOM05D017301 ORTHO05D000669 3.9e-08 62.0 76 47.4
CSS0031762 Camellia sinensis var. sinensis HOM05D000451 ORTHO05D000351 1.5e-07 60.1 62 56.5
CSS0005666 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D033858 5.6e-07 58.2 34 82.4
Rhsim04G0140200 Rhododendron simsii HOM05D017301 ORTHO05D000669 1.6e-06 56.6 91 44.0
Rhsim10G0150700 Rhododendron simsii HOM05D017301 ORTHO05D000669 2.1e-06 56.2 67 50.7
Dinv04254 Davidia involucrata HOM05D008892 ORTHO05D010661 2.8e-06 55.8 86 37.2
Dinv09482 Davidia involucrata HOM05D008892 ORTHO05D010661 2.8e-06 55.8 86 37.2


User provided reference genes

Program Settings