Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019401 Camellia sinensis var. sinensis HOM05D001127 ORTHO05D012710 1.4e-37 159.1 77 100.0
Dinv35690 Davidia involucrata HOM05D001127 ORTHO05D002230 3.0e-16 88.2 64 64.1
Hma1.2p1_0111F.1_g053610 Hydrangea macrophylla HOM05D001127 ORTHO05D002230 4.3e-15 84.3 65 63.1
Actinidia19725 Actinidia chinensis HOM05D001127 ORTHO05D002230 3.1e-13 78.2 67 58.2
TAR369G1035 Trochodendron aralioides HOM05D001127 ORTHO05D002230 9.1e-13 76.6 78 52.6
Nitab4.5_0000848g0020 Nicotiana tabacum HOM05D001127 ORTHO05D002230 7.7e-12 73.6 62 54.8
RhsimUnG0119800 Rhododendron simsii HOM05D001127 ORTHO05D002230 7.7e-12 73.6 81 54.3
Peaxi162Scf00543g00420 Petunia axillaris HOM05D001127 ORTHO05D002230 3.8e-11 71.2 63 52.4
QL07p045698 Quercus lobata HOM05D001127 ORTHO05D002230 5.0e-11 70.9 56 57.1
Prupe.2G221500 Prunus persica HOM05D001127 ORTHO05D002230 3.2e-10 68.2 62 58.1
QL08p057343 Quercus lobata HOM05D001127 ORTHO05D002230 5.5e-10 67.4 75 49.3
Duzib114G0575 Durio zibethinus HOM05D001127 ORTHO05D002230 7.2e-10 67.0 72 48.6
Sopen09g002030 Solanum pennellii HOM05D001127 ORTHO05D002230 2.7e-09 65.1 64 50.0
CSS0014447 Camellia sinensis var. sinensis HOM05D001127 ORTHO05D002230 3.6e-09 64.7 56 58.9
CSS0018774 Camellia sinensis var. sinensis HOM05D001127 ORTHO05D002230 3.6e-09 64.7 56 58.9
Haze_16959 Corylus avellana HOM05D001127 ORTHO05D002230 3.6e-09 64.7 76 47.4
Actinidia03011 Actinidia chinensis HOM05D001127 ORTHO05D002230 4.6e-09 64.3 61 50.8
Cfa001570 Carpinus fangiana HOM05D001127 ORTHO05D002230 4.6e-09 64.3 76 47.4
Cfa017482 Carpinus fangiana HOM05D001127 ORTHO05D002230 4.6e-09 64.3 51 58.8
Gohir.A10G208300 Gossypium hirsutum HOM05D001127 ORTHO05D002230 4.6e-09 64.3 71 46.5
Potri.008G046600 Populus trichocarpa HOM05D001127 ORTHO05D002230 4.6e-09 64.3 69 52.2
Duzib106G1592 Durio zibethinus HOM05D001127 ORTHO05D002230 6.1e-09 63.9 71 47.9
CiPaw.02G177900 Carya illinoinensis HOM05D001127 ORTHO05D002230 1.0e-08 63.2 64 57.8
Solyc09g007160.4 Solanum lycopersicum HOM05D001127 ORTHO05D002230 1.0e-08 63.2 63 49.2
Manes.07G105500 Manihot esculenta HOM05D001127 ORTHO05D002230 2.3e-08 62.0 74 45.9
CAN.G350.54 Capsicum annuum HOM05D001127 ORTHO05D002230 3.0e-08 61.6 38 65.8
Gohir.D10G216600 Gossypium hirsutum HOM05D001127 ORTHO05D002230 3.9e-08 61.2 69 46.4
PGSC0003DMG403027896 Solanum tuberosum HOM05D001127 ORTHO05D012710 3.9e-08 61.2 63 49.2
CiPaw.01G278600 Carya illinoinensis HOM05D001127 ORTHO05D002230 5.1e-08 60.8 78 48.7
MD01G1114800 Malus domestica HOM05D001127 ORTHO05D002230 5.1e-08 60.8 61 54.1
MD07G1182800 Malus domestica HOM05D001127 ORTHO05D002230 5.1e-08 60.8 58 55.2
GSVIVG01025565001 Vitis vinifera HOM05D001127 ORTHO05D002230 6.7e-08 60.5 64 51.6
Actinidia38233 Actinidia chinensis HOM05D001127 ORTHO05D002230 8.8e-08 60.1 61 52.5
Sabra10G0166100 Salix brachista HOM05D001127 ORTHO05D002230 1.1e-07 59.7 77 46.8
vmacro20076 Vaccinium macrocarpon HOM05D001127 ORTHO05D002230 1.1e-07 59.7 33 78.8
COL.COLO4_06786 Corchorus olitorius HOM05D001127 ORTHO05D002230 1.5e-07 59.3 76 42.1
Cc09_g02300 Coffea canephora HOM05D001127 ORTHO05D002230 2.0e-07 58.9 65 50.8
Actinidia29193 Actinidia chinensis HOM05D001127 ORTHO05D002230 2.6e-07 58.5 48 56.2
Gorai.011G242200 Gossypium raimondii HOM05D001127 ORTHO05D002230 2.6e-07 58.5 58 51.7
Lj5g0015647 Lotus japonicus HOM05D001127 ORTHO05D002230 2.6e-07 58.5 58 53.4
Sabra08G0032900 Salix brachista HOM05D001127 ORTHO05D002230 3.3e-07 58.2 77 46.8
Lj5g0024475 Lotus japonicus HOM05D001127 ORTHO05D002230 5.7e-07 57.4 59 50.8
ATR0594G169 Amborella trichopoda HOM05D001127 ORTHO05D002230 7.4e-07 57.0 62 48.4
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 9.7e-07 56.6 58 50.0
Oeu029109.1 Olea europaea HOM05D001127 ORTHO05D002230 9.7e-07 56.6 58 51.7
CiPaw.09G184300 Carya illinoinensis HOM05D001127 ORTHO05D002230 1.3e-06 56.2 30 73.3
Haze_20676 Corylus avellana HOM05D001127 ORTHO05D002230 1.3e-06 56.2 57 49.1
Duzib128G1061 Durio zibethinus HOM05D001127 ORTHO05D002230 1.3e-06 56.2 70 42.9
Potri.010G215000 Populus trichocarpa HOM05D001127 ORTHO05D002230 1.7e-06 55.8 77 45.5
Medtr1g116310 Medicago truncatula HOM05D001127 ORTHO05D002230 2.2e-06 55.5 52 53.8
Thecc.10G064300 Theobroma cacao HOM05D001127 ORTHO05D002230 2.2e-06 55.5 68 45.6
Ciclev10030687m.g Citrus clementina HOM05D001127 ORTHO05D002230 2.8e-06 55.1 64 50.0
Migut.L01649 Erythranthe guttata HOM05D001127 ORTHO05D002230 2.8e-06 55.1 34 64.7
Sed0016528 Sechium edule HOM05D001127 ORTHO05D002230 4.8e-06 54.3 58 44.8
Sopen04g019660 Solanum pennellii HOM05D001127 ORTHO05D012710 4.8e-06 54.3 62 51.6
SGA_v2.0_scaffold329G48854 Striga asiatica HOM05D001127 ORTHO05D002230 4.8e-06 54.3 64 50.0
Phvul.007G005500 Phaseolus vulgaris HOM05D001127 ORTHO05D002230 6.3e-06 53.9 37 64.9
GSVIVG01032641001 Vitis vinifera HOM05D001127 ORTHO05D002230 6.3e-06 53.9 49 59.2


User provided reference genes

Program Settings