Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019383 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 8.3e-254 879.8 417 100.0
CSS0012725 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 5.7e-194 681.0 411 83.7
CSS0026782 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 4.2e-189 664.8 384 84.9
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 1.0e-81 308.1 429 46.9
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 2.3e-41 174.1 387 33.1
Rhsim04G0208100 Rhododendron simsii HOM05D013111 ORTHO05D013046 1.3e-36 158.3 374 34.5
vmacro10470 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 4.7e-31 139.8 398 30.9
CSS0046102 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 1.3e-28 131.7 309 34.6
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 1.1e-27 128.6 319 31.0
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 3.2e-27 127.1 373 29.2
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.1e-27 126.7 311 30.9
CSS0022125 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 2.7e-26 124.0 293 33.8
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.1e-24 118.6 315 30.5
CSS0005117 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 2.5e-24 117.5 249 34.9
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.6e-23 114.8 292 30.1
QL02p072942 Quercus lobata HOM05D025100 ORTHO05D010877 3.6e-23 113.6 358 27.4
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 6.2e-23 112.8 412 28.9
Dinv33461 Davidia involucrata HOM05D010628 ORTHO05D010877 6.2e-23 112.8 285 31.2
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.1e-22 112.1 295 31.2
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 2.3e-22 110.9 330 26.7
vmacro22846 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 6.8e-22 109.4 299 30.1
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.5e-21 108.2 299 29.4
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 1.3e-20 105.1 303 32.7
CSS0008723 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 2.9e-20 104.0 313 29.1
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 1.1e-19 102.1 284 27.5
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.2e-19 100.5 284 28.2
Haze_19261 Corylus avellana HOM05D008391 ORTHO05D009743 5.4e-19 99.8 371 27.8
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.6e-18 98.2 248 27.8
DCAR_018731 Daucus carota HOM05D029922 ORTHO05D013046 2.1e-18 97.8 300 27.3
Rhsim07G0232000 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.1e-18 97.8 335 27.8
RhsimUnG0033600 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.1e-18 97.8 335 27.5
CSS0043929 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 6.0e-18 96.3 225 30.7
Dinv28165 Davidia involucrata HOM05D011324 ORTHO05D013448 7.8e-18 95.9 227 30.0
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 7.8e-18 95.9 302 27.5
Haze_19280 Corylus avellana HOM05D008391 ORTHO05D009743 1.0e-17 95.5 370 27.0
QL01p000349 Quercus lobata HOM05D013052 ORTHO05D012831 1.0e-17 95.5 413 28.3
vmacro20887 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 2.3e-17 94.4 242 32.2
Dinv28167 Davidia involucrata HOM05D011324 ORTHO05D013448 3.0e-17 94.0 285 29.1
QL11p050245 Quercus lobata HOM05D010066 ORTHO05D009743 3.0e-17 94.0 374 26.7
QL93p0284_0002 Quercus lobata HOM05D010066 ORTHO05D009743 3.0e-17 94.0 374 26.7
Rhsim04G0224100 Rhododendron simsii HOM05D013111 ORTHO05D013046 5.1e-17 93.2 194 37.1
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 6.6e-17 92.8 260 28.1
Dinv35632 Davidia involucrata HOM05D013363 ORTHO05D015094 8.6e-17 92.4 319 28.2
Dinv28164 Davidia involucrata HOM05D011324 ORTHO05D013448 1.1e-16 92.0 248 28.6
Dinv28168 Davidia involucrata HOM05D011324 ORTHO05D013448 3.3e-16 90.5 222 30.2
QL10p008459 Quercus lobata HOM05D013052 ORTHO05D012831 4.3e-16 90.1 270 30.7
Dinv01717 Davidia involucrata HOM05D011324 ORTHO05D013448 1.2e-15 88.6 263 28.1
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.8e-15 87.4 252 27.8
CSS0033232 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 6.2e-15 86.3 237 30.8
Dinv25051 Davidia involucrata HOM05D011324 ORTHO05D013448 6.2e-15 86.3 325 24.6
Dinv28170 Davidia involucrata HOM05D011324 ORTHO05D013448 6.2e-15 86.3 263 28.5
Dinv28172 Davidia involucrata HOM05D011324 ORTHO05D013448 8.1e-15 85.9 228 28.1
Duzib264G0155 Durio zibethinus HOM05D029922 ORTHO05D035097 8.1e-15 85.9 315 26.3
Hund00487 Selenicereus undatus HOM05D064078 ORTHO05D012831 3.1e-14 84.0 255 30.2
Duzib264G0667 Durio zibethinus HOM05D029922 ORTHO05D035097 4.0e-14 83.6 315 25.7
Duzib264G0671 Durio zibethinus HOM05D029922 ORTHO05D035097 5.2e-14 83.2 280 26.1
Dinv35658 Davidia involucrata HOM05D013363 ORTHO05D015094 9.9e-13 79.0 325 25.2
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 1.7e-12 78.2 288 28.1
Rhsim11G0040000 Rhododendron simsii HOM05D013111 ORTHO05D013046 2.2e-12 77.8 170 36.5
Rhsim05G0135400 Rhododendron simsii HOM05D013111 ORTHO05D013046 4.9e-12 76.6 290 23.4
QL10p008435 Quercus lobata HOM05D013052 ORTHO05D012831 1.4e-11 75.1 267 29.2
RhsimUnG0035000 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.4e-11 75.1 324 26.9
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 5.4e-11 73.2 177 28.8
COL.COLO4_24092 Corchorus olitorius HOM05D014846 ORTHO05D016249 7.1e-11 72.8 307 26.1
QL11p042411 Quercus lobata HOM05D025344 ORTHO05D009743 7.1e-11 72.8 298 24.5
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 9.2e-11 72.4 282 26.2
Rhsim03G0231000 Rhododendron simsii HOM05D018081 ORTHO05D026100 1.2e-10 72.0 335 25.7
QL11p055815 Quercus lobata HOM05D025344 ORTHO05D021181 4.6e-10 70.1 349 23.8
COL.COLO4_09850 Corchorus olitorius HOM05D014846 ORTHO05D016249 6.0e-10 69.7 317 28.4
COL.COLO4_09561 Corchorus olitorius HOM05D014846 ORTHO05D016249 7.8e-10 69.3 245 30.2
COL.COLO4_31618 Corchorus olitorius HOM05D044258 ORTHO05D044749 7.8e-10 69.3 267 27.7
Rhsim12G0051600 Rhododendron simsii HOM05D010628 ORTHO05D016249 7.8e-10 69.3 251 26.3
Ah.01g016440 Amaranthus hybridus HOM05D036488 ORTHO05D021181 2.3e-09 67.8 246 26.0
Ah.01g016270 Amaranthus hybridus HOM05D036488 ORTHO05D021181 3.0e-09 67.4 242 26.4
Ah.01g016360 Amaranthus hybridus HOM05D036488 ORTHO05D021181 3.0e-09 67.4 242 26.4
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 8.7e-09 65.9 130 30.0
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 1.5e-08 65.1 294 25.2
Aqoxy1G01963 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 2.5e-08 64.3 296 25.3
EL10Ac6g13766 Beta vulgaris HOM05D000034 ORTHO05D000037 3.3e-08 63.9 207 30.9
Rhsim03G0039300 Rhododendron simsii HOM05D018081 ORTHO05D010877 3.3e-08 63.9 252 27.0
Thecc.07G157200 Theobroma cacao HOM05D009781 ORTHO05D011819 7.3e-08 62.8 204 28.9
Lj3P635T20 Lonicera japonica HOM05D053282 ORTHO05D010877 9.6e-08 62.4 277 25.6
COL.COLO4_31368 Corchorus olitorius HOM05D017380 ORTHO05D019049 1.2e-07 62.0 203 30.5
Dinv28162 Davidia involucrata HOM05D011324 ORTHO05D013448 2.8e-07 60.8 70 40.0
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 3.6e-07 60.5 207 27.1
Haze_19844 Corylus avellana HOM05D027064 ORTHO05D009743 1.8e-06 58.2 356 23.3
COL.COLO4_31297 Corchorus olitorius HOM05D017380 ORTHO05D019049 2.4e-06 57.8 95 38.9
Thhalv10025393m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 3.1e-06 57.4 181 27.6
QL09p047090 Quercus lobata HOM05D041046 ORTHO05D021181 9.0e-06 55.8 216 27.8


User provided reference genes

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