Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019356 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.6e-63 243.8 119 100.0
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 3.0e-47 191.8 107 88.8
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.1e-44 183.3 107 86.0
CSS0012798 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 4.0e-44 181.4 119 78.2
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.9e-44 180.6 107 86.0
CSS0046849 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 4.5e-43 177.9 119 77.3
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.1e-14 83.6 115 43.5
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 3.1e-12 75.5 105 41.0
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 1.2e-11 73.6 108 40.7
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 2.0e-11 72.8 105 41.0
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 8.5e-10 67.4 108 38.9
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 1.4e-09 66.6 109 41.3
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 2.5e-09 65.9 107 37.4
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 7.2e-09 64.3 108 38.0
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 7.2e-09 64.3 108 37.0
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 7.2e-09 64.3 108 37.0
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 9.4e-09 63.9 77 46.8
Lj1A798T44 Lonicera japonica HOM05D011954 ORTHO05D014236 1.2e-08 63.5 108 36.1
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 1.6e-08 63.2 108 37.0
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 2.1e-08 62.8 107 36.4
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.7e-08 62.4 117 33.3
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 3.6e-08 62.0 72 43.1
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-07 60.1 107 37.4
Rhsim12G0199500 Rhododendron simsii HOM05D000727 ORTHO05D000541 1.4e-07 60.1 87 43.7
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 1.8e-07 59.7 80 40.0
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 2.3e-07 59.3 72 40.3
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.7e-07 57.8 106 36.8
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.8e-07 57.4 106 36.8
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.8e-07 57.4 106 36.8
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-06 57.0 79 38.0
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 1.1e-06 57.0 72 38.9
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-06 57.0 72 38.9
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 1.5e-06 56.6 69 39.1
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 1.5e-06 56.6 69 39.1
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.5e-06 56.6 106 35.8
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.5e-06 56.6 106 35.8
Lj1A748T28 Lonicera japonica HOM05D011954 ORTHO05D014236 1.5e-06 56.6 109 39.4
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 2.0e-06 56.2 72 36.1
Rhsim09G0029000 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.6e-06 55.8 73 41.1
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.6e-06 55.8 91 37.4
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.3e-06 55.5 80 36.2
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 3.3e-06 55.5 72 37.5
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 3.3e-06 55.5 110 31.8
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 3.3e-06 55.5 72 37.5
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 3.3e-06 55.5 110 31.8
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 3.3e-06 55.5 72 37.5
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 3.3e-06 55.5 79 35.4
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.4e-06 55.1 106 34.0
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.7e-06 54.7 106 34.0
Duzib187G0243 Durio zibethinus HOM05D016489 ORTHO05D007789 5.7e-06 54.7 109 31.2


User provided reference genes

Program Settings